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Papers and Presentations
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</font></font></b>
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<hr>
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This list may not be up-to-date...
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<p>
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<b> Hypergraph Partitioning</b>
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<ul>
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<li>
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<b>Hypergraph-based Dynamic Load Balancing for Adaptive Scientific Computations.</b><br>
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U. Catalyurek, E. Boman, K. Devine, D. Bozdag, R. Heaphy, L.A. Riesen.<br>
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<i> Proceedings of IPDPS'07</i>, Best Algorithms Paper Award, March 2007.
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<br>
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<A HREF="http://cs.sandia.gov/Zoltan/abstracts/Catalyurek_IPDPS07.html">Abstract</A> (HTML)
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<a href="http://cs.sandia.gov/Zoltan/papers/Catalyurek_IPDPS07.pdf">Paper</a> (PDF)
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<a href="http://cs.sandia.gov/Zoltan/citations/Catalyurek_IPDPS07.txt">Citation</a> (BIBTEX)
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</li>
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<p>
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<li>
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<b>A Repartitioning Hypergraph Model for Dynamic Load Balancing</b><br>
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U. Catalyurek, E. Boman, K. Devine, D. Bozdag, R. Heaphy, L.A. Riesen.<br>
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<i>Journal of Parallel and Distributed Computing</i>,
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Vol. 69, No. 8, pp. 711-724, Aug 2009.
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<br>
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<A HREF="http://cs.sandia.gov/Zoltan/abstracts/JPDC_repart.html">Abstract</A> (HTML)
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<a href="http://cs.sandia.gov/Zoltan/papers/JPDC_repart.pdf">Paper</a> (PDF)
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<a href="http://cs.sandia.gov/Zoltan/citations/JPDC_repart.txt">Citation</a> (BIBTEX)
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</li>
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<p>
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<li>
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<b>Hypergraph-based Dynamic Partitioning and Load Balancing.</b><br>
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U. Catalyurek, D. Bozdag, E. Boman, K. Devine, R. Heaphy, and L.A. Riesen.<br>
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<i>Advanced Computational Infrastructures for
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Parallel/Distributed Adaptive Applications,</i> M. Parashar, ed., Wiley Publishing, Dec. 2009.
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<br>
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<!---- <a href="http://cs.sandia.gov/Zoltan/papers/wiley_chapter.pdf">Paper</a> (PDF)
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---->
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<a href="http://cs.sandia.gov/Zoltan/citations/wiley_chapter.txt">Citation</a> (BIBTEX)
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</li>
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<p>
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<li>
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<b>Parallel Hypergraph Partitioning for Scientific Computing.</b><br>
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K. Devine, E. Boman, R. Heaphy, R. Bisseling, U. Catalyurek.<br>
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<i> Proceedings of IPDPS 2006</i>, April 2006.
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<br>
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<A HREF="http://cs.sandia.gov/Zoltan/abstracts/IPDPS06_Final.html">Abstract</A> (HTML)
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<a href="http://cs.sandia.gov/Zoltan/papers/IPDPS06_Final.pdf">Paper</a> (PDF)
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<a href="http://cs.sandia.gov/Zoltan/citations/IPDPS06_Final.txt">Citation</a> (BIBTEX)
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</li>
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<p>
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<li>
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<b>Parallel Hypergraph Partitioning for Irregular Problems.</b><br>
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|
K. Devine, E. Boman, R. Heaphy, U. Catalyurek, R. Bisseling.<br>
|
|
|
<i>SIAM Parallel Processing for Scientific Computing</i>, February 2006.
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|
<br>
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|
<a href="http://cs.sandia.gov/Zoltan/papers/siam_pp06.pdf">Viewgraphs</a> (PDF)
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</li>
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</ul>
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<b>Zoltan</b>
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<ul>
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<li>
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<a href="https://dx.doi.org/10.3233/SPR-2012-0342"><b>The Zoltan and Isorropia Parallel Toolkits for Combinatorial Scientific Computing: Partitioning, Ordering, and Coloring</b></a>
|
|
|
<br>E.G. Boman, U.V. Catalyurek, C. Chevalier, and K.D. Devine, Scientific Programming vol. 20, no. 2, 2012, special issue on Trilinos.
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<br> <br>
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<li>
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<b>Getting Started with Zoltan: A Short Tutorial.</b><br>
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K. Devine, E. Boman, L.A. Riesen, U. Catalyurek and C. Chevalier.<br>
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<i>Proc. 2009 Dagstuhl Seminar on Combinatorial Scientific Computing</i>,
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February, 2009.<br>
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<a href="http://cs.sandia.gov/Zoltan/papers/Dagstuhl09.pdf">PDF</a>
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<a href="http://cs.sandia.gov/Zoltan/citations/Dagstuhl09.txt">Citation</a> (BIBTEX)
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<a href="http://cs.sandia.gov/Zoltan/papers/zoltan_tutorial_dagstuhl09.pdf">Viewgraphs</a> from the tutorial (PDF)
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<br><br>
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</li>
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<li>
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<b>Zoltan Data Management Services for Parallel Dynamic Applications.</b><br>
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K. Devine, E. Boman, R. Heaphy, B. Hendrickson, and C. Vaughan.<br>
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<i>Computing in Science and Engineering</i>, Vol. 4, No. 2, March/April 2002, pp. 90-97.
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<br>
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<a href="http://cs.sandia.gov/Zoltan/papers/c2sciprog_final.pdf">Paper</a> (PDF)
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<a href="http://cs.sandia.gov/Zoltan/citations/c2sciprog_final.txt">Citation</a> (BIBTEX)
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<br>
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<p>
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<li>
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<b><a href="ug_html/ug.html">Zoltan v3: Parallel Partitioning, Load Balancing and Data-Management Services, User's Guide
|
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</a>.</b><br>
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E. Boman, K. Devine, R. Heaphy, B. Hendrickson, V. Leung, L.A. Riesen, C. Vaughan, U. Catalyurek, D. Bozdag, W. Mitchell and J. Teresco.<br>
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Sandia National Laboratories Tech. Rep. SAND2007-4748W, Albuquerque, NM, 2007.
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<br>
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<a href="ug_html/ug.html">Manual</a> (HTML)
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<a href="http://cs.sandia.gov/Zoltan/citations/zoltanUG.txt">Citation</a> (BIBTEX)
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<br>
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<p>
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<li>
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<b><a href="dev_html/dev.html">Zoltan v3: Parallel Partitioning, Load Balancing and Data-Management Services, Developer's Guide
|
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</a>.</b><br>
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E. Boman, K. Devine, R. Heaphy, B. Hendrickson, V. Leung, L.A. Riesen, C. Vaughan, U. Catalyurek, D. Bozdag, and W. Mitchell.<br>
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Sandia National Laboratories Tech. Rep. SAND2007-4749W, Albuquerque, NM, 2007.
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<br>
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<!-----------
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<a href="http://cs.sandia.gov/Zoltan/Zoltan_pdf/dev.pdf">Manual</a> (PDF)
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--------->
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<a href="http://cs.sandia.gov/Zoltan/citations/zoltanDEV.txt">Citation</a> (BIBTEX)
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<br>
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<p>
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<li>
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<b>Tinkertoy Parallel Computing: A Case Study With Zoltan.</b><br>
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K. Devine and B. Hendrickson.<br>
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<i>Int. J. Computational Science and Engineering</i>, 2005.
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<br>
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<A HREF="http://cs.sandia.gov/Zoltan/abstracts/tinkertoy.html">Abstract</A> (HTML)
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<a href="http://cs.sandia.gov/Zoltan/papers/tinkertoy.pdf">Paper</a> (PDF)
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<a href="http://cs.sandia.gov/Zoltan/citations/tinkertoy.txt">Citation</a> (BIBTEX)
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</li>
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<p>
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<li>
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<b>Design of Dynamic Load-Balancing Tools for Parallel Applications.</b><br>
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K. Devine, B. Hendrickson, E. Boman, M. St.John, and C. Vaughan.<br>
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<i>Proceedings of the International Conference on Supercomputing</i>,
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Santa Fe, May, 2000. <br>
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<A HREF="http://cs.sandia.gov/Zoltan/abstracts/ics00.html">Abstract</A> (HTML)
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<!----
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<A HREF="http://cs.sandia.gov/Zoltan/papers/ics00.ps.gz">Paper</A> (PS.GZ)
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---->
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<a href="http://cs.sandia.gov/Zoltan/citations/ics00.txt">Citation</a> (BIBTEX)
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<br>
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<p>
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</ul>
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<b>Dynamic Load Balancing</b>
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<br>
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<ul>
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<li>
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<b>Partitioning and Load Balancing for Emerging Parallel Applications and
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|
Architectures.</b><br>
|
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K. Devine, E. Boman, and G. Karypis.<br>
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Chapter in <i>Parallel Processing for Scientific Computing</i>,
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Heroux, Raghavan, Simon, eds. SIAM (2006) 99-126.
|
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<br>
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<!----
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<A HREF="http://cs.sandia.gov/Zoltan/papers/pp04.pdf">Paper</A> (PDF)
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|
---->
|
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|
<a href="http://cs.sandia.gov/Zoltan/citations/pp04.txt">Citation</a> (BIBTEX)
|
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</li>
|
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<p>
|
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<li>
|
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|
<b>New Challenges in Dynamic Load Balancing.</b><br>
|
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|
K. Devine, E. Boman, R. Heaphy, B. Hendrickson, J. Teresco, J. Faik,
|
|
|
J. Flaherty, L. Gervasio.<br>
|
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|
<i>Applied Numerical Mathematics</i>, Vol. 52, Issues 2-3, pp. 133-152, 2005.
|
|
|
</li>
|
|
|
<p>
|
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|
<li>
|
|
|
<b>Partitioning and Dynamic Load Balancing for the Numerical Solution of
|
|
|
Partial Differential Equations.</b><br>
|
|
|
J. Teresco, K. Devine, J. Flaherty.<br>
|
|
|
Chapter in
|
|
|
<i>Numerial Solution of Partial Differential Equations on Parallel
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|
Computers</i>, Bruaset, Bj<EFBFBD>rstad, Tveito, editors. <EFBFBD> Springer-Verlag, 2005.
|
|
|
</li>
|
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<p>
|
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|
<li>
|
|
|
<b>A model for resource-aware load balancing on heterogeneous clusters.</b><br>
|
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|
J. Faik, J. Flaherty, L. Gervasio, J. Teresco, K. Devine.<br>
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|
Williams College Department of Computer Science Technical Report CS-05-01, 2005.
|
|
|
</li>
|
|
|
<p>
|
|
|
<li>
|
|
|
<b>Dynamic Load Balancing in Computational Mechanics.</b><br>
|
|
|
B. Hendrickson and K. Devine.<br>
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|
|
<i>Comput. Methods Appl. Mech. Engrg.</i>, <b>184</b> (2000), 485-500.
|
|
|
<br>
|
|
|
<A HREF="http://cs.sandia.gov/Zoltan/abstracts/cmame.html">Abstract</A> (HTML)
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<A HREF="http://cs.sandia.gov/Zoltan/papers/cmame.ps.gz">Paper</A> (PS.GZ)
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<br>
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<p>
|
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|
|
|
<LI>
|
|
|
<b>Graph Partitioning Models for Parallel Computing.</b><br>
|
|
|
Bruce Hendrickson and Tamara G. Kolda.<br>
|
|
|
<i>Parallel Computing</i>, <b>26</b> (2000), 1519-1534. <BR>
|
|
|
<A HREF="http://cs.sandia.gov/~bahendr/abstracts/models.html">Abstract</A> (HTML)
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<A HREF="http://cs.sandia.gov/pub/papers/bahendr/models.ps.gz">Paper</A> (PS.GZ)
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<br>
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|
<P>
|
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|
|
|
<LI>
|
|
|
<b>Load Balancing Fictions, Falsehoods and Falacies.</b><br>
|
|
|
Bruce Hendrickson.<br>
|
|
|
<i>Applied Mathematical Modelling</i>, 25:99-108, 2000.<BR>
|
|
|
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|
|
<A HREF="http://cs.sandia.gov/~bahendr/abstracts/myths.html">Abstract</A> (HTML)
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<A HREF="http://cs.sandia.gov/pub/papers/bahendr/myths.ps.gz">Paper</A> (PS.GZ)
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|
<A HREF="http://cs.sandia.gov/~bahendr/talks/Myths_html/main.htm">HTML version of overheads</A> from plenary talk at the <i>3rd DRAMA Steering Workshop</i>,
|
|
|
September, 1999.<BR>
|
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|
<P>
|
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|
|
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<LI>
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|
|
<b>Interprocessor Communication with Memory Constraints.</b><br>
|
|
|
Ali Pinar and Bruce Hendrickson.<br>
|
|
|
<i>Proc. 12th ACM Symp. Parallel Algorithms and Architectures</i>,
|
|
|
July 2000. <BR>
|
|
|
<A HREF="http://cs.sandia.gov/~bahendr/abstracts/spaa00.html">Abstract</A> (HTML)
|
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|
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|
<A HREF="http://cs.sandia.gov/pub/papers/bahendr/spaa00.ps.gz">Paper</A> (PS.GZ)
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<P>
|
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<LI>
|
|
|
<b>Graph Partitioning and Parallel Solvers: Has the Emperor No Clothes
|
|
|
(Extended Abstract).</b><br>
|
|
|
Bruce Hendrickson.<br>
|
|
|
<i>Proc. Irregular'98</i>,
|
|
|
<A HREF="https://link.springer.de/series/lncs/"> Lecture Notes in
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|
|
Computer Science, 1457</A>, pp. 218-225, 1998. Copyright Springer-Verlag. <BR>
|
|
|
<A HREF="http://cs.sandia.gov/~bahendr/abstracts/irreg98.html">Abstract</A> (HTML)
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<A HREF="http://cs.sandia.gov/pub/papers/bahendr/irreg98.ps.gz">Paper</A> (PS.GZ)
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<br>
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|
<P>
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|
<li>
|
|
|
<b>Parallel Adaptive <i>hp</i>-Refinement Techniques for Conservation Laws.</b><br>
|
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|
K. Devine and J. Flaherty.<br>
|
|
|
<i>Applied Numerical Mathematics</i>, <b>20</b> (1996), 367-386.
|
|
|
<br>
|
|
|
<A HREF="http://cs.sandia.gov/Zoltan/abstracts/anm96.html">Abstract</A> (HTML)
|
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<A HREF="http://cs.sandia.gov/Zoltan/papers/anm96.ps.gz">Paper</A> (PS.GZ)
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<br>
|
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|
<p>
|
|
|
|
|
|
<li>
|
|
|
<b>Dynamic Load Balancing for Parallel Finite Element Methods
|
|
|
with Adaptive <i>h</i>- and <i>p</i>-Refinement.</b><br>
|
|
|
K. Devine and J. Flaherty.<br>
|
|
|
<i>Proceedings of the Seventh SIAM Conference on
|
|
|
Parallel Processing for Scientific Computing</i>,
|
|
|
San Francisco, CA, February, 1995.<br>
|
|
|
<A HREF="http://cs.sandia.gov/Zoltan/abstracts/siampp95.html">Abstract</A> (HTML)
|
|
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|
<A HREF="http://cs.sandia.gov/Zoltan/papers/siampp95.ps.gz">Paper</A> (PS.GZ)
|
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<br>
|
|
|
<p>
|
|
|
|
|
|
<LI>
|
|
|
<b>Parallel Algorithms for Dynamically Partitioning Unstructured Grids.</b><br>
|
|
|
Pedro Diniz, Steve Plimpton, Bruce Hendrickson and Robert Leland.<br>
|
|
|
<i>Proceedings of the Seventh SIAM Conference on Parallel
|
|
|
Processing for Scientific Computing</i>, San Francisco, CA, February, 1995. <BR>
|
|
|
<A HREF="http://cs.sandia.gov/~bahendr/abstracts/dynamic.html">Abstract</A> (HTML)
|
|
|
|
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|
<A HREF="http://cs.sandia.gov/pub/papers/bahendr/dynamic.ps.gz">Paper</A> (PS.GZ)
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<br>
|
|
|
<p>
|
|
|
|
|
|
|
|
|
</ul>
|
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|
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|
<p>
|
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<b>
|
|
|
Coloring
|
|
|
</b>
|
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|
<p>
|
|
|
<ul>
|
|
|
<li>
|
|
|
<b>Improving Graph Coloring on Distributed Memory Parallel Computers.</b><br>
|
|
|
A.E. Sariy<EFBFBD>ce, E. Saule and <EFBFBD>.V. <EFBFBD>ataly<EFBFBD>rek. <br>
|
|
|
<i>Proceedings of 18th Annual International Conference on High Performance Computing (HiPC 2011), </i>
|
|
|
Dec 2011, to appear.
|
|
|
<br><p>
|
|
|
</li>
|
|
|
<li>
|
|
|
<b>Distributed-memory Parallel Algorithms for Distance-2 Coloring and Related Problems in Derivative Computation. </b><br>
|
|
|
D. Bozdag, <EFBFBD>.V. <EFBFBD>ataly<EFBFBD>rek, A. H. Gebremedhin, F. Manne, E.G. Boman, and F. <EFBFBD>zg<EFBFBD>ner. <br>
|
|
|
<i>SIAM Journal of Scientific Computing</i>, Vol. 32, No. 4, pp. 2418-2446, 2010. <br><p>
|
|
|
</li>
|
|
|
<li>
|
|
|
<b>A Framework for Scalable Greedy Coloring on Distributed Memory Parallel Computers. </b><br>
|
|
|
D. Bozdag, A. Gebremedhin, F. Manne, E.G. Boman, and <EFBFBD>.V. <EFBFBD>ataly<EFBFBD>rek. <br>
|
|
|
<i>Journal of Parallel and Distributed Computing</i>, Vol. 68, No. 4, pp. 515-535, Apr 2008. <br><p>
|
|
|
</li>
|
|
|
<li>
|
|
|
<b>A Scalable Parallel Graph Coloring Algorithm for Distributed-Memory
|
|
|
Computers.</b><br>
|
|
|
E. Boman, D. Bozdag, U. Catalyurek, A. Gebremedhim, F. Manne.<br>
|
|
|
<i>EuroPar 2005</i>, August 2005.
|
|
|
</li>
|
|
|
<p>
|
|
|
<li>
|
|
|
<b>A Parallel Distance-2 graph coloring algorithm for distributed memory
|
|
|
computers.</b><br>
|
|
|
E. Boman, D. Bozdag, U. Catalyurek, A. Gebremedhin, F. Manne, F. Ozguner.<br>
|
|
|
<i>HPCC-05</i>, September 2005.
|
|
|
</li>
|
|
|
|
|
|
</ul>
|
|
|
|
|
|
|
|
|
<b>Miscellaneous</b>
|
|
|
<ul>
|
|
|
<li>
|
|
|
<b>Combinatorial Algorithms Enabling Computational Science: Tales From the
|
|
|
Front.</b><br>
|
|
|
S. Bhowmick, E. Boman, K. Devine, A. Gebremedhin, B. Hendrickson, P. Hovland, T. Munson, A. Pothen.<br>
|
|
|
Sandia National Laboratories Tech. Rep. SAND2006-3914C, Albuquerque, NM, 2006.
|
|
|
Submitted to <i>Journal of Physics: Conference Series</i>, July 2006.
|
|
|
</li>
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<p>
|
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</ul>
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<!---------MAIN CONTENT AREA ENDS HERE---------><!-- CHANGE CONTACT + E-MAIL, NOTE "SUBJECT" IN E-MAIL CODE --></td>
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