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309 lines
11 KiB
309 lines
11 KiB
# This is a basic workflow to help you get started with Actions
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name: SEACAS Variant builds
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# Controls when the action will run. Triggers the workflow on push
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on:
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push:
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branches:
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- master
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pull_request:
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branches:
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- master
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jobs:
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build-deps:
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runs-on: ubuntu-latest
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strategy:
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matrix:
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compiler: [ gnu, clang, mpi ]
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hdf5: [ V110 ]
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netcdf: [ 4.9.2 ]
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cgns: [ 4.3.0 ]
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steps:
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- uses: actions/checkout@v3
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- name: Install System dependencies
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shell: bash -l {0}
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run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev openmpi-bin libopenmpi-dev
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###
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# Installing TPL
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###
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- name: Cache TPL-${{ matrix.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}
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id: cache-TPL-mpi
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uses: actions/cache@v3
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with:
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path: ~/environments/${{ matrix.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}
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key: TPL-v4-${{ runner.os }}-${{ matrix.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}
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- name: Build TPL-${{ matrix.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}
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if: steps.cache-TPL.outputs.cache-hit != 'true'
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run: |
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set -x
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COMPILER=${{ matrix.compiler }} H5VERSION=${{ matrix.hdf5}} GNU_PARALLEL=OFF INSTALL_PATH=${HOME}/environments/${{ matrix.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }} ./install-tpl.sh
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ls ${HOME} && ls ${HOME}/environments && ls ${HOME}/environments/${{ matrix.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }} && ls ${HOME}/environments/${{ matrix.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}/lib
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build:
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needs: build-deps
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# The type of runner that the job will run on
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name: ${{ matrix.config.name }}
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runs-on: ${{ matrix.config.os }}
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strategy:
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fail-fast: false
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matrix:
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hdf5: [ V110 ]
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netcdf: [ 4.9.2 ]
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cgns: [ 4.3.0 ]
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config:
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- {
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name: "Debug serial build",
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os: ubuntu-latest,
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compiler: "gnu",
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debug: "YES",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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- {
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name: "Debug parallel build",
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os: ubuntu-latest,
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compiler: "mpi",
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debug: "YES",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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- {
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name: "Threadsafe ON, No Fortran",
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os: ubuntu-latest,
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compiler: "gnu",
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debug: "YES",
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threadsafe: "YES",
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fortran: "NO",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "thread" # address, integer, thread, memory, undefined
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}
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- {
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name: "Threadsafe ON, Parallel, No Fortran",
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os: ubuntu-latest,
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compiler: "mpi",
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debug: "YES",
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threadsafe: "YES",
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fortran: "NO",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "thread" # address, integer, thread, memory, undefined
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}
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- {
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name: "Sanitize address, no fortran",
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os: ubuntu-latest,
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compiler: "clang",
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debug: "YES",
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threadsafe: "NO",
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fortran: "NO",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "address" # address, integer, thread, memory, undefined
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}
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- {
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name: "Sanitize undefined",
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os: ubuntu-latest,
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compiler: "clang",
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debug: "YES",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "undefined" # address, integer, thread, memory, undefined
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}
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- {
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name: "Sanitize integer",
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os: ubuntu-latest,
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compiler: "clang",
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debug: "YES",
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threadsafe: "NO",
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fortran: "NO",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "integer" # address, integer, thread, memory, undefined
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}
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- {
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name: "GTest Enabled",
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os: ubuntu-latest,
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compiler: "gnu",
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debug: "YES",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "YES",
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extra: "",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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- {
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name: "No applications, legacy, or fortran",
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os: ubuntu-latest,
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compiler: "clang",
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debug: "NO",
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threadsafe: "NO",
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fortran: "NO",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "APPLICATIONS=NO LEGACY=NO",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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- {
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name: "CATALYST2, serial",
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os: ubuntu-latest,
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compiler: "clang",
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debug: "NO",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "YES",
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gtest: "NO",
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extra: "",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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- {
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name: "KOKKOS, parallel",
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os: ubuntu-latest,
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compiler: "mpi",
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debug: "NO",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "YES",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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- {
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name: "No deprecated exodus functions",
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os: ubuntu-latest,
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compiler: "mpi",
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debug: "NO",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "OMIT_DEPRECATED=YES",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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- {
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name: "Use modern CMake configure of netCDF and HDF5 packages",
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os: ubuntu-latest,
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compiler: "mpi",
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debug: "NO",
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threadsafe: "NO",
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fortran: "YES",
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use_kokkos: "NO",
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use_adios2: "NO",
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use_catalyst2: "NO",
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gtest: "NO",
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extra: "MODERN=YES",
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sanitizer: "NO" # address, integer, thread, memory, undefined
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}
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steps:
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- uses: actions/checkout@v3
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- name: Install System dependencies
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shell: bash -l {0}
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run: sudo apt update && sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake libzip-dev openmpi-bin libopenmpi-dev
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- name: Fetch TPL Cache
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id: cache-TPL
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uses: actions/cache@v3
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with:
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path: ~/environments/${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}
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key: TPL-v4-${{ runner.os }}-${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}
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- name: Check Cache
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shell: bash -l {0}
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run: ls ${HOME} && ls ${HOME}/environments && ls ${HOME}/environments/${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }} && ls ${HOME}/environments/${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}/lib
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- name: install additional TPL
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if: ${{ matrix.config.use_kokkos == 'YES' || matrix.config.use_adios2 == 'YES' || matrix.config.gtest == 'YES' || matrix.config.use_catalyst == 'YES' }}
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run: |
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set -x
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COMPILER=${{ matrix.config.compiler }} KOKKOS=${{ matrix.config.use_kokkos }} ADIOS2=${{ matrix.config.use_adios2 }} CATALYST2=${{ matrix.config.use_catalyst2 }} GNU_PARALLEL=OFF GTEST=${{ matrix.config.gtest }} INSTALL_PATH=${HOME}/environments/${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }} ./install-tpl.sh
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ls ${HOME} && ls ${HOME}/environments && ls ${HOME}/environments/${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }} && ls ${HOME}/environments/${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }}/lib
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###
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# Configure and build
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###
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- name: Run cmake
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shell: bash -l {0}
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run: |
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echo $HOME
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mkdir build
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cd build
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NUMPROCS=2 ${{ matrix.config.extra }} THREADSAFE=${{ matrix.config.threadsafe }} DEBUG=${{ matrix.config.debug }} FORTRAN=${{ matrix.config.fortran }} SANITIZER=${{ matrix.config.sanitizer }} COMPILER=${{ matrix.config.compiler }} INSTALL_PATH=${HOME}/environments/${{ matrix.config.compiler }}-${{ matrix.hdf5 }}-${{ matrix.netcdf }}-${{ matrix.cgns }} bash ../cmake-config
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- name: Build
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shell: bash -l {0}
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run: |
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cd build
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make -j 4
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if: ${{ success() }}
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- name: Install
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shell: bash -l {0}
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run: |
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cd build
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make -j 4 install
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if: ${{ success() }}
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- name: Run Non-sanitized Tests
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shell: bash -l {0}
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run: |
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cd build
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ctest -j 4 --output-on-failure
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if: ${{ success() && matrix.config.sanitizer == 'NO' && matrix.config.threadsafe == 'NO' }}
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- name: Run sanitized/threadsafe Tests
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shell: bash -l {0}
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run: |
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cd build
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ctest -j 4 --output-on-failure --exclude-regex test_exo
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if: ${{ success() && (matrix.config.sanitizer != 'NO' || matrix.config.threadsafe != 'NO') }}
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