commit
42a6d127a4
5041 changed files with 3308897 additions and 0 deletions
@ -0,0 +1,17 @@ |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
|
||||
## ------------------ ## |
||||
## User Preferences. ## |
||||
## ------------------ ## |
||||
|
||||
begin-language: "Autoconf" |
||||
args: --no-cache |
||||
end-language: "Autoconf" |
||||
@ -0,0 +1,100 @@ |
||||
--- |
||||
BasedOnStyle: LLVM |
||||
AlignConsecutiveAssignments: true |
||||
BraceWrapping: |
||||
AfterFunction: true |
||||
#llvm10-11: AfterControlStatement: false - Never |
||||
BeforeCatch: true |
||||
BeforeElse: true |
||||
#llvm11: BeforeLambdaBody: false |
||||
#llvm11: BeforeWhile: false |
||||
BreakBeforeBraces: Stroustrup |
||||
BreakAfterJavaFieldAnnotations: true |
||||
BreakStringLiterals: true |
||||
ColumnLimit: 110 # Update $max_trace_macro_line_len in bin/trace also |
||||
IndentWidth: 4 |
||||
--- |
||||
Language: Cpp |
||||
#llvm11: AlignConsecutiveBitFields: false |
||||
AlignConsecutiveDeclarations: true |
||||
AlignConsecutiveMacros: true |
||||
#llvm10-11: AlignOperands: true - Align |
||||
#llvm11: AllowShortEnumsOnASingleLine: true |
||||
AllowShortFunctionsOnASingleLine: None |
||||
AlwaysBreakAfterReturnType: AllDefinitions |
||||
# Can enable the following section when llvm 12.x is out |
||||
#AttributeMacros: |
||||
# - H5_ATTR_FORMAT |
||||
# - H5_ATTR_UNUSED |
||||
# - H5_ATTR_DEPRECATED_USED |
||||
# - H5_ATTR_NDEBUG_UNUSED |
||||
# - H5_ATTR_DEBUG_API_USED |
||||
# - H5_ATTR_PARALLEL_UNUSED |
||||
# - H5_ATTR_PARALLEL_USED |
||||
# - H5_ATTR_NORETURN |
||||
# - H5_ATTR_CONST |
||||
# - H5_ATTR_PURE |
||||
# - H5_ATTR_FALLTHROUGH |
||||
ForEachMacros: ['ALL_MEMBERS', 'UNIQUE_MEMBERS'] |
||||
IncludeCategories: |
||||
- Regex: '^"(llvm|llvm-c|clang|clang-c)/' |
||||
Priority: 3 |
||||
SortPriority: 0 |
||||
- Regex: '^(<|"(gtest|gmock|isl|json)/)' |
||||
Priority: 4 |
||||
SortPriority: 0 |
||||
- Regex: '.*' |
||||
Priority: 0 |
||||
SortPriority: 0 |
||||
- Regex: '^H5*.*' |
||||
Priority: 1 |
||||
SortPriority: 0 |
||||
- Regex: 'private.*' |
||||
Priority: 2 |
||||
SortPriority: 0 |
||||
IncludeIsMainRegex: '(public)?$' |
||||
IndentCaseLabels: true |
||||
#llvm11: IndentCaseBlocks: false |
||||
IndentGotoLabels: false |
||||
#llvm11: IndentExternBlock: AfterExternBlock |
||||
#llvm11: InsertTrailingCommas: None |
||||
MacroBlockBegin: "^BEGIN_FUNC" |
||||
MacroBlockEnd: "^END_FUNC" |
||||
ObjCBlockIndentWidth: 4 |
||||
#llvm11: ObjCBreakBeforeNestedBlockParam: true |
||||
ReflowComments: true |
||||
SortIncludes: false |
||||
StatementMacros: |
||||
- FUNC_ENTER_API |
||||
- FUNC_LEAVE_API |
||||
- FUNC_ENTER_NOAPI_NOINIT_NOERR |
||||
- FUNC_LEAVE_NOAPI |
||||
- H5_BEGIN_TAG |
||||
- HGOTO_DONE_TAG |
||||
- H5_END_TAG |
||||
- HSYS_DONE_ERROR |
||||
- HSYS_GOTO_ERROR |
||||
- HDONE_ERROR |
||||
- HERROR |
||||
- H5_LEAVE |
||||
- H5E_PRINTF |
||||
- H5E_THROW |
||||
- HGOTO_DONE |
||||
- HGOTO_ERROR |
||||
- HMPI_ERROR |
||||
- HMPI_DONE_ERROR |
||||
- HMPI_GOTO_ERROR |
||||
- H5_GCC_DIAG_OFF |
||||
- H5_GCC_DIAG_ON |
||||
- CATCH |
||||
#llvm10: TypenameMacros: |
||||
#llvm10: - STACK_OF |
||||
#llvm10: - LIST |
||||
#llvm11: WhitespaceSensitiveMacros: |
||||
#llvm11: - STRINGIZE |
||||
#llvm11: - PP_STRINGIZE |
||||
--- |
||||
Language: Java |
||||
BreakAfterJavaFieldAnnotations: true |
||||
JavaImportGroups: ['java', 'hdf', 'hdf.hdf5lib', 'org'] |
||||
... |
||||
@ -0,0 +1,879 @@ |
||||
* text=auto !eol |
||||
bin/bbrelease -text |
||||
bin/genparser -text |
||||
bin/switch_maint_mode -text |
||||
c++/src/H5OcreatProp.cpp -text |
||||
c++/src/H5OcreatProp.h -text |
||||
c++/src/footer.html -text |
||||
c++/src/header_files/hdf_logo.jpg -text |
||||
c++/src/header_files/help.jpg -text |
||||
c++/src/header_files/image001.jpg -text |
||||
c++/src/header_files/image002.jpg -text |
||||
c++/test/tarray.cpp -text |
||||
c++/test/th5s.h5 -text |
||||
config/cce-fflags -text |
||||
config/cce-flags -text |
||||
config/cmake/CMakeFindJavaCommon.cmake -text |
||||
config/cmake/CPack.Info.plist.in -text svneol=unset#application/xml |
||||
config/cmake/FindHDFJAVA.cmake.in -text |
||||
config/cmake/FindJNI.cmake -text |
||||
config/cmake/HDF5UseFortran.cmake -text |
||||
config/cmake/HDF5_Examples.cmake.in -text |
||||
config/cmake/HDF5_Process_Flex_Files.cmake -text |
||||
config/cmake/HDFCompilerFlags.cmake -text |
||||
config/cmake/UseJava.cmake -text |
||||
config/cmake/UseJavaClassFilelist.cmake -text |
||||
config/cmake/UseJavaSymlinks.cmake -text |
||||
config/cmake/jrunTest.cmake -text |
||||
config/cmake/patch.xml -text |
||||
config/cmake/scripts/CTestScript.cmake -text |
||||
config/cmake/scripts/HDF5config.cmake -text |
||||
config/cmake_ext_mod/hdf.bmp -text |
||||
config/cmake_ext_mod/hdf.icns -text |
||||
config/cmake_ext_mod/hdf.ico -text |
||||
config/conclude_fc.am -text |
||||
config/gnu-cxxflags -text |
||||
examples/h5_vds-eiger.c -text |
||||
examples/h5_vds-exc.c -text |
||||
examples/h5_vds-exclim.c -text |
||||
examples/h5_vds-percival-unlim-maxmin.c -text |
||||
examples/h5_vds-percival-unlim.c -text |
||||
examples/h5_vds-percival.c -text |
||||
examples/h5_vds-simpleIO.c -text |
||||
examples/h5_vds.c -text |
||||
fortran/src/H5_buildiface.F90 -text |
||||
fortran/src/H5config_f.inc.cmake -text |
||||
fortran/src/H5config_f.inc.in -text |
||||
fortran/src/H5fort_type_defines.h.in -text |
||||
fortran/src/H5fortkit.F90 -text |
||||
fortran/test/H5_test_buildiface.F90 -text |
||||
hl/fortran/src/H5HL_buildiface.F90 -text |
||||
hl/fortran/src/hdf5_hl_fortrandll.def.in -text |
||||
hl/src/H5LD.c -text |
||||
hl/src/H5LDprivate.h -text |
||||
hl/src/H5LDpublic.h -text |
||||
hl/src/H5LTanalyze.c -text |
||||
hl/src/H5LTparse.c -text |
||||
hl/src/H5LTparse.h -text |
||||
hl/test/gen_test_ds.c svneol=native#text/plain |
||||
hl/test/gen_test_ld.c -text |
||||
hl/test/test_ds_be.h5 -text |
||||
hl/test/test_ds_le.h5 -text |
||||
hl/test/test_dset_append.c -text |
||||
hl/test/test_ld.c -text |
||||
hl/test/test_ld.h5 -text |
||||
hl/test/test_packet_vlen.c -text |
||||
hl/test/test_table_be.h5 -text |
||||
hl/test/test_table_cray.h5 -text |
||||
hl/test/test_table_le.h5 -text |
||||
hl/tools/gif2h5/CMakeLists.txt -text |
||||
hl/tools/gif2h5/CMakeTests.cmake -text |
||||
hl/tools/gif2h5/testfiles/README -text |
||||
hl/tools/gif2h5/testfiles/ex_image2.h5 -text |
||||
hl/tools/gif2h5/testfiles/h52giftst.h5 -text |
||||
hl/tools/gif2h5/testfiles/image1.gif -text |
||||
java/CMakeLists.txt -text |
||||
java/COPYING -text |
||||
java/Makefile.am -text |
||||
java/examples/CMakeLists.txt -text |
||||
java/examples/Makefile.am -text |
||||
java/examples/datasets/CMakeLists.txt -text |
||||
java/examples/datasets/H5Ex_D_Alloc.java -text |
||||
java/examples/datasets/H5Ex_D_Checksum.java -text |
||||
java/examples/datasets/H5Ex_D_Chunk.java -text |
||||
java/examples/datasets/H5Ex_D_Compact.java -text |
||||
java/examples/datasets/H5Ex_D_External.java -text |
||||
java/examples/datasets/H5Ex_D_FillValue.java -text |
||||
java/examples/datasets/H5Ex_D_Gzip.java -text |
||||
java/examples/datasets/H5Ex_D_Hyperslab.java -text |
||||
java/examples/datasets/H5Ex_D_Nbit.java -text |
||||
java/examples/datasets/H5Ex_D_ReadWrite.java -text |
||||
java/examples/datasets/H5Ex_D_Shuffle.java -text |
||||
java/examples/datasets/H5Ex_D_Sofloat.java -text |
||||
java/examples/datasets/H5Ex_D_Soint.java -text |
||||
java/examples/datasets/H5Ex_D_Szip.java -text |
||||
java/examples/datasets/H5Ex_D_Transform.java -text |
||||
java/examples/datasets/H5Ex_D_UnlimitedAdd.java -text |
||||
java/examples/datasets/H5Ex_D_UnlimitedGzip.java -text |
||||
java/examples/datasets/H5Ex_D_UnlimitedMod.java -text |
||||
java/examples/datasets/Makefile.am -text |
||||
java/examples/datasets/runExample.sh.in -text |
||||
java/examples/datatypes/CMakeLists.txt -text |
||||
java/examples/datatypes/H5Ex_T_Array.java -text |
||||
java/examples/datatypes/H5Ex_T_ArrayAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_Bit.java -text |
||||
java/examples/datatypes/H5Ex_T_BitAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_Commit.java -text |
||||
java/examples/datatypes/H5Ex_T_Compound.java -text |
||||
java/examples/datatypes/H5Ex_T_CompoundAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_Float.java -text |
||||
java/examples/datatypes/H5Ex_T_FloatAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_Integer.java -text |
||||
java/examples/datatypes/H5Ex_T_IntegerAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_ObjectReference.java -text |
||||
java/examples/datatypes/H5Ex_T_ObjectReferenceAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_Opaque.java -text |
||||
java/examples/datatypes/H5Ex_T_OpaqueAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_String.java -text |
||||
java/examples/datatypes/H5Ex_T_StringAttribute.java -text |
||||
java/examples/datatypes/H5Ex_T_VLString.java -text |
||||
java/examples/datatypes/Makefile.am -text |
||||
java/examples/datatypes/runExample.sh.in -text |
||||
java/examples/groups/CMakeLists.txt -text |
||||
java/examples/groups/H5Ex_G_Compact.java -text |
||||
java/examples/groups/H5Ex_G_Corder.java -text |
||||
java/examples/groups/H5Ex_G_Create.java -text |
||||
java/examples/groups/H5Ex_G_Intermediate.java -text |
||||
java/examples/groups/H5Ex_G_Iterate.java -text |
||||
java/examples/groups/H5Ex_G_Phase.java -text |
||||
java/examples/groups/H5Ex_G_Traverse.java -text |
||||
java/examples/groups/H5Ex_G_Visit.java -text |
||||
java/examples/groups/Makefile.am -text |
||||
java/examples/groups/h5ex_g_iterate.h5 -text svneol=unset#application/x-hdf |
||||
java/examples/groups/h5ex_g_visit.h5 -text svneol=unset#application/x-hdf |
||||
java/examples/groups/runExample.sh.in -text |
||||
java/examples/intro/CMakeLists.txt -text |
||||
java/examples/intro/H5_CreateAttribute.java -text |
||||
java/examples/intro/H5_CreateDataset.java -text |
||||
java/examples/intro/H5_CreateFile.java -text |
||||
java/examples/intro/H5_CreateGroup.java -text |
||||
java/examples/intro/H5_CreateGroupAbsoluteRelative.java -text |
||||
java/examples/intro/H5_CreateGroupDataset.java -text |
||||
java/examples/intro/H5_ReadWrite.java -text |
||||
java/examples/intro/Makefile.am -text |
||||
java/examples/intro/runExample.sh.in -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Alloc.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Checksum.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Chunk.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Compact.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_External.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_FillValue.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Gzip.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Hyperslab.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Nbit.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_ReadWrite.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Shuffle.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Sofloat.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Soint.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Szip.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_Transform.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_UnlimitedAdd.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_UnlimitedGzip.txt -text |
||||
java/examples/testfiles/examples.datasets.H5Ex_D_UnlimitedMod.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_Array.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_ArrayAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_Bit.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_BitAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_Commit.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_Compound.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_CompoundAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_Float.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_FloatAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_Integer.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_IntegerAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_ObjectReference.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_ObjectReferenceAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_Opaque.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_OpaqueAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_String.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_StringAttribute.txt -text |
||||
java/examples/testfiles/examples.datatypes.H5Ex_T_VLString.txt -text |
||||
java/examples/testfiles/examples.groups.H5Ex_G_Compact.txt -text |
||||
java/examples/testfiles/examples.groups.H5Ex_G_Corder.txt -text |
||||
java/examples/testfiles/examples.groups.H5Ex_G_Create.txt -text |
||||
java/examples/testfiles/examples.groups.H5Ex_G_Intermediate.txt -text |
||||
java/examples/testfiles/examples.groups.H5Ex_G_Iterate.txt -text |
||||
java/examples/testfiles/examples.groups.H5Ex_G_Phase.txt -text |
||||
java/examples/testfiles/examples.groups.H5Ex_G_Visit.txt -text |
||||
java/examples/testfiles/examples.intro.H5_CreateAttribute.txt -text |
||||
java/examples/testfiles/examples.intro.H5_CreateDataset.txt -text |
||||
java/examples/testfiles/examples.intro.H5_CreateFile.txt -text |
||||
java/examples/testfiles/examples.intro.H5_CreateGroup.txt -text |
||||
java/examples/testfiles/examples.intro.H5_CreateGroupAbsoluteRelative.txt -text |
||||
java/examples/testfiles/examples.intro.H5_CreateGroupDataset.txt -text |
||||
java/examples/testfiles/examples.intro.H5_ReadWrite.txt -text |
||||
java/lib/ext/slf4j-nop-2.0.6.jar -text svneol=unset#application/zip |
||||
java/lib/ext/slf4j-simple-2.0.6.jar -text svneol=unset#application/zip |
||||
java/lib/hamcrest-core.jar -text svneol=unset#application/java-archive |
||||
java/lib/junit.jar -text svneol=unset#application/java-archive |
||||
java/lib/simplelogger.properties -text |
||||
java/lib/slf4j-api-2.0.6.jar -text svneol=unset#application/zip |
||||
java/src/CMakeLists.txt -text |
||||
java/src/Makefile.am -text |
||||
java/src/hdf/CMakeLists.txt -text |
||||
java/src/hdf/hdf5lib/CMakeLists.txt -text |
||||
java/src/hdf/hdf5lib/H5.java -text |
||||
java/src/hdf/hdf5lib/HDF5Constants.java -text |
||||
java/src/hdf/hdf5lib/HDF5GroupInfo.java -text |
||||
java/src/hdf/hdf5lib/HDFArray.java -text |
||||
java/src/hdf/hdf5lib/HDFNativeData.java -text |
||||
java/src/hdf/hdf5lib/callbacks/Callbacks.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5A_iterate_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5A_iterate_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5D_append_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5D_append_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5D_iterate_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5D_iterate_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5E_walk_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5E_walk_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5L_iterate_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5L_iterate_opdata_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5O_iterate_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5O_iterate_opdata_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_cls_close_func_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_cls_copy_func_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_cls_create_func_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_iterate_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_iterate_t.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_prp_close_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_prp_compare_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_prp_copy_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_prp_create_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_prp_delete_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_prp_get_func_cb.java -text |
||||
java/src/hdf/hdf5lib/callbacks/H5P_prp_set_func_cb.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5AtomException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5AttributeException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5BtreeException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5DataFiltersException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5DataStorageException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5DatasetInterfaceException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5DataspaceInterfaceException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5DatatypeInterfaceException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5Exception.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5ExternalFileListException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5FileInterfaceException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5FunctionArgumentException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5FunctionEntryExitException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5HeapException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5InternalErrorException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5JavaException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5LibraryException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5LowLevelIOException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5MetaDataCacheException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5ObjectHeaderException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5PropertyListInterfaceException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5ReferenceException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5ResourceUnavailableException.java -text |
||||
java/src/hdf/hdf5lib/exceptions/HDF5SymbolTableException.java -text |
||||
java/src/hdf/hdf5lib/structs/H5AC_cache_config_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5A_info_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5E_error2_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5F_info2_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5G_info_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5L_info_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5O_hdr_info_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5O_info_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5O_native_info_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5O_token_t.java -text |
||||
java/src/hdf/hdf5lib/structs/H5_ih_info_t.java -text |
||||
java/src/hdf/overview.html -text |
||||
java/src/jni/CMakeLists.txt -text |
||||
java/src/jni/Makefile.am -text |
||||
java/src/jni/exceptionImp.c -text |
||||
java/src/jni/exceptionImp.h -text |
||||
java/src/jni/h5Constants.c -text |
||||
java/src/jni/h5Imp.c -text |
||||
java/src/jni/h5Imp.h -text |
||||
java/src/jni/h5aImp.c -text |
||||
java/src/jni/h5aImp.h -text |
||||
java/src/jni/h5dImp.c -text |
||||
java/src/jni/h5dImp.h -text |
||||
java/src/jni/h5eImp.c -text |
||||
java/src/jni/h5eImp.h -text |
||||
java/src/jni/h5fImp.c -text |
||||
java/src/jni/h5fImp.h -text |
||||
java/src/jni/h5gImp.c -text |
||||
java/src/jni/h5gImp.h -text |
||||
java/src/jni/h5iImp.c -text |
||||
java/src/jni/h5iImp.h -text |
||||
java/src/jni/h5jni.h -text |
||||
java/src/jni/h5lImp.c -text |
||||
java/src/jni/h5lImp.h -text |
||||
java/src/jni/h5oImp.c -text |
||||
java/src/jni/h5oImp.h -text |
||||
java/src/jni/h5pImp.c -text |
||||
java/src/jni/h5pImp.h -text |
||||
java/src/jni/h5plImp.c -text |
||||
java/src/jni/h5plImp.h -text |
||||
java/src/jni/h5rImp.c -text |
||||
java/src/jni/h5rImp.h -text |
||||
java/src/jni/h5sImp.c -text |
||||
java/src/jni/h5sImp.h -text |
||||
java/src/jni/h5tImp.c -text |
||||
java/src/jni/h5tImp.h -text |
||||
java/src/jni/h5util.c -text |
||||
java/src/jni/h5util.h -text |
||||
java/src/jni/h5zImp.c -text |
||||
java/src/jni/h5zImp.h -text |
||||
java/src/jni/nativeData.c -text |
||||
java/src/jni/nativeData.h -text |
||||
java/test/CMakeLists.txt -text |
||||
java/test/JUnit-interface.ert -text |
||||
java/test/JUnit-interface.txt -text |
||||
java/test/Makefile.am -text |
||||
java/test/TestAll.java -text |
||||
java/test/TestH5.java -text |
||||
java/test/TestH5A.java -text |
||||
java/test/TestH5D.java -text |
||||
java/test/TestH5Dparams.java -text |
||||
java/test/TestH5Dplist.java -text |
||||
java/test/TestH5E.java -text |
||||
java/test/TestH5Edefault.java -text |
||||
java/test/TestH5Eparams.java -text |
||||
java/test/TestH5Eregister.java -text |
||||
java/test/TestH5F.java -text |
||||
java/test/TestH5Fbasic.java -text |
||||
java/test/TestH5Fparams.java -text |
||||
java/test/TestH5G.java -text |
||||
java/test/TestH5Gbasic.java -text |
||||
java/test/TestH5Giterate.java -text |
||||
java/test/TestH5Lbasic.java -text |
||||
java/test/TestH5Lcreate.java -text |
||||
java/test/TestH5Lparams.java -text |
||||
java/test/TestH5Obasic.java -text |
||||
java/test/TestH5Ocopy.java -text |
||||
java/test/TestH5Ocreate.java -text |
||||
java/test/TestH5Oparams.java -text |
||||
java/test/TestH5P.java -text |
||||
java/test/TestH5PData.java -text |
||||
java/test/TestH5PL.java -text |
||||
java/test/TestH5Pfapl.java -text |
||||
java/test/TestH5Plist.java -text |
||||
java/test/TestH5Pvirtual.java -text |
||||
java/test/TestH5R.java -text |
||||
java/test/TestH5S.java -text |
||||
java/test/TestH5Sbasic.java -text |
||||
java/test/TestH5T.java -text |
||||
java/test/TestH5Tbasic.java -text |
||||
java/test/TestH5Tparams.java -text |
||||
java/test/TestUnit.java -text |
||||
java/test/TestH5Z.java -text |
||||
java/test/h5ex_g_iterate.orig -text svneol=unset#application/x-hdf |
||||
java/test/junit.sh.in -text |
||||
m4/aclocal_cxx.m4 -text |
||||
m4/aclocal_fc.f90 -text |
||||
m4/aclocal_fc.m4 -text |
||||
m4/ax_check_class.m4 -text |
||||
m4/ax_check_classpath.m4 -text |
||||
m4/ax_check_java_home.m4 -text |
||||
m4/ax_check_junit.m4 -text |
||||
m4/ax_check_rqrd_class.m4 -text |
||||
m4/ax_java_check_class.m4 -text |
||||
m4/ax_java_options.m4 -text |
||||
m4/ax_jni_include_dir.m4 -text |
||||
m4/ax_prog_doxygen.m4 -text |
||||
m4/ax_prog_jar.m4 -text |
||||
m4/ax_prog_java.m4 -text |
||||
m4/ax_prog_java_cc.m4 -text |
||||
m4/ax_prog_java_works.m4 -text |
||||
m4/ax_prog_javac.m4 -text |
||||
m4/ax_prog_javac_works.m4 -text |
||||
m4/ax_prog_javadoc.m4 -text |
||||
m4/ax_prog_javah.m4 -text |
||||
m4/ax_try_compile_java.m4 -text |
||||
m4/ax_try_run_java.m4 -text |
||||
src/H5Cepoch.c -text |
||||
src/H5Cquery.c -text |
||||
src/H5Ctag.c -text |
||||
src/H5Ctest.c -text |
||||
src/H5Dnone.c -text |
||||
src/H5Dsingle.c -text |
||||
src/H5Oflush.c -text |
||||
test/bad_compound.h5 -text |
||||
test/be_data.h5 -text |
||||
test/be_extlink1.h5 -text |
||||
test/be_extlink2.h5 -text |
||||
test/btree_idx_1_6.h5 -text |
||||
test/btree_idx_1_8.h5 -text |
||||
test/cork.c -text |
||||
test/corrupt_stab_msg.h5 -text |
||||
test/deflate.h5 -text |
||||
test/dynlib4.c -text |
||||
test/family_v16-000000.h5 -text |
||||
test/family_v16-000001.h5 -text |
||||
test/family_v16-000002.h5 -text |
||||
test/family_v16-000003.h5 -text |
||||
test/file_image_core_test.h5 -text |
||||
test/filespace_1_6.h5 -text |
||||
test/filespace_1_8.h5 -text |
||||
test/fill_old.h5 -text |
||||
test/filter_error.h5 -text |
||||
test/group_old.h5 -text |
||||
test/le_data.h5 -text |
||||
test/le_extlink1.h5 -text |
||||
test/le_extlink2.h5 -text |
||||
test/mergemsg.h5 -text svneol=unset#application/hdf5 |
||||
test/multi_file_v16-r.h5 -text |
||||
test/multi_file_v16-s.h5 -text |
||||
test/noencoder.h5 -text |
||||
test/specmetaread.h5 -text |
||||
test/tarrold.h5 -text |
||||
test/tbad_msg_count.h5 -text |
||||
test/tbogus.h5 -text |
||||
test/test_filters_be.h5 -text |
||||
test/test_filters_le.h5 -text |
||||
test/testfiles/plist_files/acpl_32be -text |
||||
test/testfiles/plist_files/acpl_32le -text |
||||
test/testfiles/plist_files/acpl_64be -text |
||||
test/testfiles/plist_files/acpl_64le -text |
||||
test/testfiles/plist_files/dapl_32be -text |
||||
test/testfiles/plist_files/dapl_32le -text |
||||
test/testfiles/plist_files/dapl_64be -text |
||||
test/testfiles/plist_files/dapl_64le -text |
||||
test/testfiles/plist_files/dcpl_32be -text |
||||
test/testfiles/plist_files/dcpl_32le -text |
||||
test/testfiles/plist_files/dcpl_64be -text |
||||
test/testfiles/plist_files/dcpl_64le -text |
||||
test/testfiles/plist_files/def_acpl_32be -text |
||||
test/testfiles/plist_files/def_acpl_32le -text |
||||
test/testfiles/plist_files/def_acpl_64be -text |
||||
test/testfiles/plist_files/def_acpl_64le -text |
||||
test/testfiles/plist_files/def_dapl_32be -text |
||||
test/testfiles/plist_files/def_dapl_32le -text |
||||
test/testfiles/plist_files/def_dapl_64be -text |
||||
test/testfiles/plist_files/def_dapl_64le -text |
||||
test/testfiles/plist_files/def_dcpl_32be -text |
||||
test/testfiles/plist_files/def_dcpl_32le -text |
||||
test/testfiles/plist_files/def_dcpl_64be -text |
||||
test/testfiles/plist_files/def_dcpl_64le -text |
||||
test/testfiles/plist_files/def_dxpl_32be -text |
||||
test/testfiles/plist_files/def_dxpl_32le -text |
||||
test/testfiles/plist_files/def_dxpl_64be -text |
||||
test/testfiles/plist_files/def_dxpl_64le -text |
||||
test/testfiles/plist_files/def_fapl_32be -text |
||||
test/testfiles/plist_files/def_fapl_32le -text |
||||
test/testfiles/plist_files/def_fapl_64be -text |
||||
test/testfiles/plist_files/def_fapl_64le -text |
||||
test/testfiles/plist_files/def_fcpl_32be -text |
||||
test/testfiles/plist_files/def_fcpl_32le -text |
||||
test/testfiles/plist_files/def_fcpl_64be -text |
||||
test/testfiles/plist_files/def_fcpl_64le -text |
||||
test/testfiles/plist_files/def_gcpl_32be -text |
||||
test/testfiles/plist_files/def_gcpl_32le -text |
||||
test/testfiles/plist_files/def_gcpl_64be -text |
||||
test/testfiles/plist_files/def_gcpl_64le -text |
||||
test/testfiles/plist_files/def_lapl_32be -text |
||||
test/testfiles/plist_files/def_lapl_32le -text |
||||
test/testfiles/plist_files/def_lapl_64be -text |
||||
test/testfiles/plist_files/def_lapl_64le -text |
||||
test/testfiles/plist_files/def_lcpl_32be -text |
||||
test/testfiles/plist_files/def_lcpl_32le -text |
||||
test/testfiles/plist_files/def_lcpl_64be -text |
||||
test/testfiles/plist_files/def_lcpl_64le -text |
||||
test/testfiles/plist_files/def_ocpl_32be -text |
||||
test/testfiles/plist_files/def_ocpl_32le -text |
||||
test/testfiles/plist_files/def_ocpl_64be -text |
||||
test/testfiles/plist_files/def_ocpl_64le -text |
||||
test/testfiles/plist_files/def_ocpypl_32be -text |
||||
test/testfiles/plist_files/def_ocpypl_32le -text |
||||
test/testfiles/plist_files/def_ocpypl_64be -text |
||||
test/testfiles/plist_files/def_ocpypl_64le -text |
||||
test/testfiles/plist_files/def_strcpl_32be -text |
||||
test/testfiles/plist_files/def_strcpl_32le -text |
||||
test/testfiles/plist_files/def_strcpl_64be -text |
||||
test/testfiles/plist_files/def_strcpl_64le -text |
||||
test/testfiles/plist_files/dxpl_32be -text |
||||
test/testfiles/plist_files/dxpl_32le -text |
||||
test/testfiles/plist_files/dxpl_64be -text |
||||
test/testfiles/plist_files/dxpl_64le -text |
||||
test/testfiles/plist_files/fapl_32be -text |
||||
test/testfiles/plist_files/fapl_32le -text |
||||
test/testfiles/plist_files/fapl_64be -text |
||||
test/testfiles/plist_files/fapl_64le -text |
||||
test/testfiles/plist_files/fcpl_32be -text |
||||
test/testfiles/plist_files/fcpl_32le -text |
||||
test/testfiles/plist_files/fcpl_64be -text |
||||
test/testfiles/plist_files/fcpl_64le -text |
||||
test/testfiles/plist_files/gcpl_32be -text |
||||
test/testfiles/plist_files/gcpl_32le -text |
||||
test/testfiles/plist_files/gcpl_64be -text |
||||
test/testfiles/plist_files/gcpl_64le -text |
||||
test/testfiles/plist_files/lapl_32be -text |
||||
test/testfiles/plist_files/lapl_32le -text |
||||
test/testfiles/plist_files/lapl_64be -text |
||||
test/testfiles/plist_files/lapl_64le -text |
||||
test/testfiles/plist_files/lcpl_32be -text |
||||
test/testfiles/plist_files/lcpl_32le -text |
||||
test/testfiles/plist_files/lcpl_64be -text |
||||
test/testfiles/plist_files/lcpl_64le -text |
||||
test/testfiles/plist_files/ocpl_32be -text |
||||
test/testfiles/plist_files/ocpl_32le -text |
||||
test/testfiles/plist_files/ocpl_64be -text |
||||
test/testfiles/plist_files/ocpl_64le -text |
||||
test/testfiles/plist_files/ocpypl_32be -text |
||||
test/testfiles/plist_files/ocpypl_32le -text |
||||
test/testfiles/plist_files/ocpypl_64be -text |
||||
test/testfiles/plist_files/ocpypl_64le -text |
||||
test/testfiles/plist_files/strcpl_32be -text |
||||
test/testfiles/plist_files/strcpl_32le -text |
||||
test/testfiles/plist_files/strcpl_64be -text |
||||
test/testfiles/plist_files/strcpl_64le -text |
||||
test/th5s.h5 -text |
||||
test/tlayouto.h5 -text |
||||
test/tmtimen.h5 -text |
||||
test/tmtimeo.h5 -text |
||||
test/tsizeslheap.h5 -text |
||||
testpar/t_init_term.c -text |
||||
testpar/t_prestart.c -text |
||||
testpar/t_pshutdown.c -text |
||||
tools/h5copy/testfiles/h5copy_extlinks_src.h5 -text |
||||
tools/h5copy/testfiles/h5copy_extlinks_trg.h5 -text |
||||
tools/h5copy/testfiles/h5copy_ref.h5 -text |
||||
tools/h5copy/testfiles/h5copytst.h5 -text |
||||
tools/h5copy/testfiles/h5copytst_new.h5 -text |
||||
tools/h5copy/testfiles/h5copytst_new.out.ls -text |
||||
tools/h5diff/testfiles/compounds_array_vlen1.h5 -text |
||||
tools/h5diff/testfiles/compounds_array_vlen2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_attr1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_attr2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_attr_v_level1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_attr_v_level2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_basic1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_basic2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_comp_vl_strs.h5 -text |
||||
tools/h5diff/testfiles/h5diff_danglelinks1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_danglelinks2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_dset1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_dset2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_dset_zero_dim_size1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_dset_zero_dim_size2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_dtypes.h5 -text |
||||
tools/h5diff/testfiles/h5diff_empty.h5 -text |
||||
tools/h5diff/testfiles/h5diff_enum_invalid_values.h5 -text |
||||
tools/h5diff/testfiles/h5diff_exclude1-1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_exclude1-2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_exclude2-1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_exclude2-2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_exclude3-1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_exclude3-2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_ext2softlink_src.h5 -text |
||||
tools/h5diff/testfiles/h5diff_ext2softlink_trg.h5 -text |
||||
tools/h5diff/testfiles/h5diff_extlink_src.h5 -text |
||||
tools/h5diff/testfiles/h5diff_extlink_trg.h5 -text |
||||
tools/h5diff/testfiles/h5diff_grp_recurse1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_grp_recurse2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_grp_recurse_ext1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_grp_recurse_ext2-1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_grp_recurse_ext2-2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_grp_recurse_ext2-3.h5 -text |
||||
tools/h5diff/testfiles/h5diff_hyper1.h5 -text |
||||
tools/h5diff/testfiles/h5diff_hyper2.h5 -text |
||||
tools/h5diff/testfiles/h5diff_linked_softlink.h5 -text |
||||
tools/h5diff/testfiles/h5diff_links.h5 -text |
||||
tools/h5diff/testfiles/h5diff_softlinks.h5 -text |
||||
tools/h5diff/testfiles/h5diff_types.h5 -text |
||||
tools/h5diff/testfiles/h5diff_v1.txt -text |
||||
tools/h5diff/testfiles/h5diff_v2.txt -text |
||||
tools/h5diff/testfiles/h5diff_v3.txt -text |
||||
tools/h5diff/testfiles/non_comparables1.h5 -text |
||||
tools/h5diff/testfiles/non_comparables2.h5 -text |
||||
tools/h5diff/testfiles/tmpSingleSiteBethe.output.h5 -text |
||||
tools/h5diff/testfiles/tmpSingleSiteBethe.reference.h5 -text |
||||
tools/h5diff/testfiles/tmptest.he5 -text |
||||
tools/h5diff/testfiles/tmptest2.he5 -text |
||||
tools/h5dump/errfiles/non_existing.err -text |
||||
tools/h5format_convert/CMakeLists.txt -text |
||||
tools/h5format_convert/CMakeTests.cmake -text |
||||
tools/h5format_convert/Makefile.am -text |
||||
tools/h5format_convert/h5fc_chk_idx.c -text |
||||
tools/h5format_convert/h5fc_gentest.c -text |
||||
tools/h5format_convert/h5format_convert.c -text |
||||
tools/h5format_convert/testfiles/h5fc_d_file.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_dname.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_edge_v3.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_err_level.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext1_f.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_ext1_f.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext1_i.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_ext1_i.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext1_s.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_ext1_s.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext2_if.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_ext2_if.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext2_is.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_ext2_is.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext2_sf.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_ext2_sf.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext3_isf.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_ext3_isf.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_ext_none.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_help.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_non_v3.h5 -text |
||||
tools/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_nonexistfile.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_nooption.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_v_all.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_v_bt1.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_v_err.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_v_n_1d.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_v_n_all.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_v_ndata_bt1.ddl -text |
||||
tools/h5format_convert/testfiles/h5fc_v_non_chunked.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext1_f.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext1_f.h5 -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext1_i.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext1_i.h5 -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext1_s.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext1_s.h5 -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext2_if.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext2_if.h5 -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext2_is.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext2_is.h5 -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext2_sf.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext2_sf.h5 -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext3_isf.ddl -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext3_isf.h5 -text |
||||
tools/h5format_convert/testfiles/old_h5fc_ext_none.h5 -text |
||||
tools/h5format_convert/testh5fc.sh.in -text |
||||
tools/h5import/testfiles/binfp64.h5 -text |
||||
tools/h5import/testfiles/binin16.h5 -text |
||||
tools/h5import/testfiles/binin32.h5 -text |
||||
tools/h5import/testfiles/binin8.h5 -text |
||||
tools/h5import/testfiles/binin8w.h5 -text |
||||
tools/h5import/testfiles/binuin16.h5 -text |
||||
tools/h5import/testfiles/binuin32.h5 -text |
||||
tools/h5import/testfiles/textpfe.h5 -text |
||||
tools/h5import/testfiles/txtfp32.h5 -text |
||||
tools/h5import/testfiles/txtfp64.h5 -text |
||||
tools/h5import/testfiles/txtin16.h5 -text |
||||
tools/h5import/testfiles/txtin32.h5 -text |
||||
tools/h5import/testfiles/txtin8.h5 -text |
||||
tools/h5import/testfiles/txtstr.h5 -text |
||||
tools/h5import/testfiles/txtuin16.h5 -text |
||||
tools/h5import/testfiles/txtuin32.h5 -text |
||||
tools/h5jam/testfiles/tall.h5 -text |
||||
tools/h5jam/testfiles/twithub.h5 -text |
||||
tools/h5jam/testfiles/twithub513.h5 -text |
||||
tools/h5repack/testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl -text |
||||
tools/h5repack/testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl -text |
||||
tools/h5repack/testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl -text |
||||
tools/h5repack/testfiles/4_vds.h5-vds_compa-v.ddl -text |
||||
tools/h5repack/testfiles/4_vds.h5-vds_conti-v.ddl -text |
||||
tools/h5repack/testfiles/README -text |
||||
tools/h5repack/testfiles/h5repack_attr.h5 -text |
||||
tools/h5repack/testfiles/h5repack_attr_refs.h5 -text |
||||
tools/h5repack/testfiles/h5repack_deflate.h5 -text |
||||
tools/h5repack/testfiles/h5repack_early.h5 -text |
||||
tools/h5repack/testfiles/h5repack_ext.bin -text |
||||
tools/h5repack/testfiles/h5repack_ext.h5 -text |
||||
tools/h5repack/testfiles/h5repack_fill.h5 -text |
||||
tools/h5repack/testfiles/h5repack_filters.h5 -text |
||||
tools/h5repack/testfiles/h5repack_filters.h5-gzip_verbose_filters.tst -text |
||||
tools/h5repack/testfiles/h5repack_fletcher.h5 -text |
||||
tools/h5repack/testfiles/h5repack_hlink.h5 -text |
||||
tools/h5repack/testfiles/h5repack_layout.UD.h5 -text svneol=unset#application/x-hdf |
||||
tools/h5repack/testfiles/h5repack_layout.h5 -text |
||||
tools/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst -text |
||||
tools/h5repack/testfiles/h5repack_layout.h5-plugin_zero.tst -text |
||||
tools/h5repack/testfiles/h5repack_layout2.h5 -text |
||||
tools/h5repack/testfiles/h5repack_layout3.h5 -text |
||||
tools/h5repack/testfiles/h5repack_layouto.h5 -text |
||||
tools/h5repack/testfiles/h5repack_named_dtypes.h5 -text |
||||
tools/h5repack/testfiles/h5repack_nbit.h5 -text |
||||
tools/h5repack/testfiles/h5repack_nested_8bit_enum.h5 -text |
||||
tools/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5 -text |
||||
tools/h5repack/testfiles/h5repack_objs.h5 -text |
||||
tools/h5repack/testfiles/h5repack_refs.h5 -text |
||||
tools/h5repack/testfiles/h5repack_shuffle.h5 -text |
||||
tools/h5repack/testfiles/h5repack_soffset.h5 -text |
||||
tools/h5repack/testfiles/h5repack_szip.h5 -text |
||||
tools/h5repack/testfiles/ublock.bin -text |
||||
tools/h5stat/testfiles/h5stat_filters.h5 -text |
||||
tools/h5stat/testfiles/h5stat_idx.ddl -text |
||||
tools/h5stat/testfiles/h5stat_idx.h5 -text |
||||
tools/h5stat/testfiles/h5stat_newgrat.h5 -text |
||||
tools/h5stat/testfiles/h5stat_threshold.h5 -text |
||||
tools/h5stat/testfiles/h5stat_tsohm.h5 -text |
||||
tools/lib/h5tools_error.h svneol=native#text/plain |
||||
tools/testfiles/charsets.h5 -text |
||||
tools/testfiles/family_file00000.h5 -text |
||||
tools/testfiles/family_file00001.h5 -text |
||||
tools/testfiles/family_file00002.h5 -text |
||||
tools/testfiles/family_file00003.h5 -text |
||||
tools/testfiles/family_file00004.h5 -text |
||||
tools/testfiles/family_file00005.h5 -text |
||||
tools/testfiles/family_file00006.h5 -text |
||||
tools/testfiles/family_file00007.h5 -text |
||||
tools/testfiles/family_file00008.h5 -text |
||||
tools/testfiles/family_file00009.h5 -text |
||||
tools/testfiles/family_file00010.h5 -text |
||||
tools/testfiles/family_file00011.h5 -text |
||||
tools/testfiles/family_file00012.h5 -text |
||||
tools/testfiles/family_file00013.h5 -text |
||||
tools/testfiles/family_file00014.h5 -text |
||||
tools/testfiles/family_file00015.h5 -text |
||||
tools/testfiles/family_file00016.h5 -text |
||||
tools/testfiles/family_file00017.h5 -text |
||||
tools/testfiles/file_space.h5 -text |
||||
tools/testfiles/filter_fail.h5 -text |
||||
tools/testfiles/non_existing.ddl -text |
||||
tools/testfiles/packedbits.h5 -text |
||||
tools/testfiles/taindices.h5 -text |
||||
tools/testfiles/tall.h5 -text |
||||
tools/testfiles/tarray1.h5 -text |
||||
tools/testfiles/tarray1_big.h5 -text |
||||
tools/testfiles/tarray2.h5 -text |
||||
tools/testfiles/tarray3.h5 -text |
||||
tools/testfiles/tarray4.h5 -text |
||||
tools/testfiles/tarray5.h5 -text |
||||
tools/testfiles/tarray6.h5 -text |
||||
tools/testfiles/tarray7.h5 -text |
||||
tools/testfiles/tarray8.h5 -text |
||||
tools/testfiles/tattr.h5 -text |
||||
tools/testfiles/tattr2.h5 -text |
||||
tools/testfiles/tattr4_be.h5 -text |
||||
tools/testfiles/tattrintsize.h5 -text |
||||
tools/testfiles/tattrreg.h5 -text |
||||
tools/testfiles/tbigdims.h5 -text |
||||
tools/testfiles/tbinary.h5 -text |
||||
tools/testfiles/tbitfields.h5 -text |
||||
tools/testfiles/tbitnopaque_be.ddl -text |
||||
tools/testfiles/tbitnopaque_le.ddl -text |
||||
tools/testfiles/tbitnopaque.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tchar.h5 -text |
||||
tools/testfiles/tcmpdattrintsize.h5 -text |
||||
tools/testfiles/tcmpdintarray.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tcmpdints.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tcmpdintsize.h5 -text |
||||
tools/testfiles/tcompound.h5 -text |
||||
tools/testfiles/tcompound2.h5 -text |
||||
tools/testfiles/tcompound_complex.h5 -text |
||||
tools/testfiles/tcompound_complex2.ddl -text |
||||
tools/testfiles/tcompound_complex2.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tdatareg.h5 -text |
||||
tools/testfiles/tdset.h5 -text |
||||
tools/testfiles/tdset2.h5 -text |
||||
tools/testfiles/tdset_idx.h5 -text |
||||
tools/testfiles/tdset_idx.ls -text |
||||
tools/testfiles/tempty.h5 -text |
||||
tools/testfiles/tenum.h5 -text |
||||
tools/testfiles/textlink.h5 -text |
||||
tools/testfiles/textlinkfar.h5 -text |
||||
tools/testfiles/textlinksrc.h5 -text |
||||
tools/testfiles/textlinktar.h5 -text |
||||
tools/testfiles/tfamily00000.h5 -text |
||||
tools/testfiles/tfamily00001.h5 -text |
||||
tools/testfiles/tfamily00002.h5 -text |
||||
tools/testfiles/tfamily00003.h5 -text |
||||
tools/testfiles/tfamily00004.h5 -text |
||||
tools/testfiles/tfamily00005.h5 -text |
||||
tools/testfiles/tfamily00006.h5 -text |
||||
tools/testfiles/tfamily00007.h5 -text |
||||
tools/testfiles/tfamily00008.h5 -text |
||||
tools/testfiles/tfamily00009.h5 -text |
||||
tools/testfiles/tfamily00010.h5 -text |
||||
tools/testfiles/tfcontents1.h5 -text |
||||
tools/testfiles/tfcontents2.h5 -text |
||||
tools/testfiles/tfilters.h5 -text |
||||
tools/testfiles/tfpformat.h5 -text |
||||
tools/testfiles/tfvalues.h5 -text |
||||
tools/testfiles/tgroup.h5 -text |
||||
tools/testfiles/tgrp_comments.h5 -text |
||||
tools/testfiles/thlink.h5 -text |
||||
tools/testfiles/thyperslab.h5 -text |
||||
tools/testfiles/tints4dims.ddl -text |
||||
tools/testfiles/tints4dims.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tints4dimsBlock2.ddl -text |
||||
tools/testfiles/tints4dimsBlockEq.ddl -text |
||||
tools/testfiles/tints4dimsCount2.ddl -text |
||||
tools/testfiles/tints4dimsCountEq.ddl -text |
||||
tools/testfiles/tints4dimsStride2.ddl -text |
||||
tools/testfiles/tintsattrs.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tlarge_objname.h5 -text |
||||
tools/testfiles/tldouble.h5 -text |
||||
tools/testfiles/tldouble_scalar.h5 -text |
||||
tools/testfiles/tlonglinks.h5 -text |
||||
tools/testfiles/tloop.h5 -text |
||||
tools/testfiles/tloop2.h5 -text |
||||
tools/testfiles/tmany.h5 -text |
||||
tools/testfiles/tmulti-b.h5 -text |
||||
tools/testfiles/tmulti-g.h5 -text svneol=unset#application/octet-stream |
||||
tools/testfiles/tmulti-l.h5 -text |
||||
tools/testfiles/tmulti-o.h5 -text |
||||
tools/testfiles/tmulti-r.h5 -text |
||||
tools/testfiles/tmulti-s.h5 -text |
||||
tools/testfiles/tname-amp.h5 -text |
||||
tools/testfiles/tname-apos.h5 -text |
||||
tools/testfiles/tname-gt.h5 -text |
||||
tools/testfiles/tname-lt.h5 -text |
||||
tools/testfiles/tname-quot.h5 -text |
||||
tools/testfiles/tname-sp.h5 -text |
||||
tools/testfiles/tnamed_dtype_attr.h5 -text |
||||
tools/testfiles/tnestedcmpddt.h5 -text |
||||
tools/testfiles/tnestedcomp.h5 -text |
||||
tools/testfiles/tno-subset.h5 -text |
||||
tools/testfiles/tnodata.h5 -text |
||||
tools/testfiles/tnullspace.h5 -text |
||||
tools/testfiles/tobjref.h5 -text |
||||
tools/testfiles/topaque.h5 -text |
||||
tools/testfiles/torderattr.h5 -text |
||||
tools/testfiles/tordergr.h5 -text |
||||
tools/testfiles/tref-escapes-at.h5 -text |
||||
tools/testfiles/tref-escapes.h5 -text |
||||
tools/testfiles/tref.h5 -text |
||||
tools/testfiles/tsaf.h5 -text |
||||
tools/testfiles/tscalarattrintsize.h5 -text |
||||
tools/testfiles/tscalarintattrsize.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tscalarintsize.h5 -text |
||||
tools/testfiles/tscalarstring.h5 -text |
||||
tools/testfiles/tslink.h5 -text |
||||
tools/testfiles/tsoftlinks.h5 -text |
||||
tools/testfiles/tsplit_file-m.h5 -text |
||||
tools/testfiles/tsplit_file-r.h5 -text |
||||
tools/testfiles/tstr.h5 -text |
||||
tools/testfiles/tstr2.h5 -text |
||||
tools/testfiles/tstr3.h5 -text |
||||
tools/testfiles/tstring-at.h5 -text |
||||
tools/testfiles/tstring.ddl -text svneol=unset#application/octet-stream |
||||
tools/testfiles/tstring.h5 -text |
||||
tools/testfiles/tudlink.h5 -text |
||||
tools/testfiles/tvldtypes1.h5 -text |
||||
tools/testfiles/tvldtypes2.h5 -text |
||||
tools/testfiles/tvldtypes3.h5 -text |
||||
tools/testfiles/tvldtypes4.h5 -text |
||||
tools/testfiles/tvldtypes5.h5 -text |
||||
tools/testfiles/tvlenstr_array.ddl -text |
||||
tools/testfiles/tvlenstr_array.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/tvlstr.h5 -text |
||||
tools/testfiles/tvms.h5 -text |
||||
tools/testfiles/vds/1_a.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/1_b.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/1_c.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/1_d.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/1_e.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/1_f.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/1_vds.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/2_a.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/2_b.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/2_c.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/2_d.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/2_e.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/2_vds.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/3_1_vds.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/3_2_vds.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/4_0.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/4_1.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/4_2.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/4_vds.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/5_a.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/5_b.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/5_c.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/5_vds.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/a.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/b.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/c.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/d.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/f-0.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/f-3.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/vds-eiger.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/vds-first.ddl -text |
||||
tools/testfiles/vds/vds-gap1.ddl -text |
||||
tools/testfiles/vds/vds-gap2.ddl -text |
||||
tools/testfiles/vds/vds-percival-unlim-maxmin.h5 -text svneol=unset#application/x-hdf |
||||
tools/testfiles/vds/vds_layout-eiger.ddl -text |
||||
tools/testfiles/vds/vds_layout-maxmin.ddl -text |
||||
tools/testfiles/zerodim.h5 -text |
||||
@ -0,0 +1,11 @@ |
||||
# Lines starting with '#' are comments. |
||||
# Each line is a file pattern followed by one or more owners. |
||||
|
||||
# These owners will be the default owners for everything in the repo. |
||||
* @lrknox @derobins @byrnHDF @fortnern @jhendersonHDF @qkoziol @vchoi-hdfgroup @bmribler @glennsong09 @mattjala @brtnfld |
||||
|
||||
# Order is important. The last matching pattern has the most precedence. |
||||
# So if a pull request only touches javascript files, only these owners |
||||
# will be requested to review. |
||||
/fortran/ @brtnfld @derobins @epourmal |
||||
/java/ @jhendersonHDF @byrnHDF @derobins |
||||
@ -0,0 +1,3 @@ |
||||
# These are supported funding model platforms |
||||
|
||||
custom: "https://hdfgroup.org/about-us/donate-to-the-hdf-group/" |
||||
@ -0,0 +1,25 @@ |
||||
--- |
||||
name: Bug report |
||||
about: Report a problem with HDF5 |
||||
title: "[BUG]" |
||||
labels: bug |
||||
assignees: '' |
||||
|
||||
--- |
||||
|
||||
**Describe the bug** |
||||
A clear and concise description of what the bug is. |
||||
|
||||
**Expected behavior** |
||||
A clear and concise description of what you expected to happen. |
||||
|
||||
**Platform (please complete the following information)** |
||||
- HDF5 version (if building from a maintenance branch, please include the commit hash) |
||||
- OS and version |
||||
- Compiler and version |
||||
- Build system (e.g. CMake, Autotools) and version |
||||
- Any configure options you specified |
||||
- MPI library and version (parallel HDF5) |
||||
|
||||
**Additional context** |
||||
Add any other context about the problem here. |
||||
@ -0,0 +1,20 @@ |
||||
--- |
||||
name: Feature request |
||||
about: Suggest an improvement to HDF5 |
||||
title: "[Feature Request]" |
||||
labels: enhancement |
||||
assignees: '' |
||||
|
||||
--- |
||||
|
||||
**Is your feature request related to a problem? Please describe.** |
||||
A clear and concise description of what the problem is. Ex. I'm always frustrated when [...] |
||||
|
||||
**Describe the solution you'd like** |
||||
A clear and concise description of what you want to happen. |
||||
|
||||
**Describe alternatives you've considered** |
||||
A clear and concise description of any alternative solutions or features you've considered. |
||||
|
||||
**Additional context** |
||||
Add any other context or screenshots about the feature request here. |
||||
@ -0,0 +1,8 @@ |
||||
## Describe your changes |
||||
|
||||
## Issue ticket number (GitHub or JIRA) |
||||
|
||||
## Checklist before requesting a review |
||||
- [ ] My code conforms to the guidelines in CONTRIBUTING.md |
||||
- [ ] I made an entry in release_docs/RELEASE.txt (bug fixes, new features) |
||||
- [ ] I added a test (bug fixes, new features) |
||||
@ -0,0 +1,18 @@ |
||||
name: clang-format Check |
||||
on: |
||||
pull_request: |
||||
jobs: |
||||
formatting-check: |
||||
name: Formatting Check |
||||
runs-on: ubuntu-latest |
||||
if: "!contains(github.event.head_commit.message, 'skip-ci')" |
||||
steps: |
||||
- uses: actions/checkout@v3 |
||||
- name: Run clang-format style check for C and Java code |
||||
uses: DoozyX/clang-format-lint-action@v0.13 |
||||
with: |
||||
source: '.' |
||||
extensions: 'c,h,cpp,hpp,java' |
||||
clangFormatVersion: 13 |
||||
style: file |
||||
exclude: './config ./hl/src/H5LTanalyze.c ./hl/src/H5LTparse.c ./hl/src/H5LTparse.h ./src/H5Epubgen.h ./src/H5Einit.h ./src/H5Eterm.h ./src/H5Edefin.h ./src/H5version.h ./src/H5overflow.h' |
||||
@ -0,0 +1,34 @@ |
||||
# NOTE: This action requires write permissions to be set in your GitHub |
||||
# repo/fork for it to be able to commit changes. |
||||
# |
||||
# This is currently enabled via: |
||||
# |
||||
# settings > Actions > General > Workflow permissions |
||||
# |
||||
# which you will need to set to "Read and write permissions" |
||||
# |
||||
name: clang-format Commit Changes |
||||
on: |
||||
workflow_dispatch: |
||||
push: |
||||
jobs: |
||||
formatting-check: |
||||
name: Commit Format Changes |
||||
runs-on: ubuntu-latest |
||||
if: "!contains(github.event.head_commit.message, 'skip-ci')" |
||||
steps: |
||||
- uses: actions/checkout@v3 |
||||
- name: Fix C and Java formatting issues detected by clang-format |
||||
uses: DoozyX/clang-format-lint-action@v0.13 |
||||
with: |
||||
source: '.' |
||||
extensions: 'c,h,cpp,hpp,java' |
||||
clangFormatVersion: 13 |
||||
inplace: True |
||||
style: file |
||||
exclude: './config ./hl/src/H5LTanalyze.c ./hl/src/H5LTparse.c ./hl/src/H5LTparse.h ./src/H5Epubgen.h ./src/H5Einit.h ./src/H5Eterm.h ./src/H5Edefin.h ./src/H5version.h ./src/H5overflow.h' |
||||
- uses: EndBug/add-and-commit@v7 |
||||
with: |
||||
author_name: github-actions |
||||
author_email: 41898282+github-actions[bot]@users.noreply.github.com |
||||
message: 'Committing clang-format changes' |
||||
@ -0,0 +1,217 @@ |
||||
name: hdf5 dev ctest runs |
||||
|
||||
# Controls when the action will run. Triggers the workflow on a schedule |
||||
on: |
||||
workflow_call: |
||||
inputs: |
||||
file_base: |
||||
description: "The common base name of the source tarballs" |
||||
required: true |
||||
type: string |
||||
|
||||
# A workflow run is made up of one or more jobs that can run sequentially or |
||||
# in parallel |
||||
jobs: |
||||
build_and_test_win: |
||||
# Windows w/ MSVC + CMake |
||||
# |
||||
name: "Windows MSVC CTest" |
||||
runs-on: windows-latest |
||||
steps: |
||||
- name: Install Dependencies (Windows) |
||||
run: choco install ninja |
||||
|
||||
- name: Enable Developer Command Prompt |
||||
uses: ilammy/msvc-dev-cmd@v1.12.1 |
||||
|
||||
- name: Set file base name (Windows) |
||||
id: set-file-base |
||||
run: | |
||||
FILE_NAME_BASE=$(echo "${{ inputs.file_base }}") |
||||
echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT |
||||
shell: bash |
||||
|
||||
# Get files created by release script |
||||
- name: Get zip-tarball (Windows) |
||||
uses: actions/download-artifact@v3 |
||||
with: |
||||
name: zip-tarball |
||||
path: ${{ github.workspace }} |
||||
|
||||
- name: using powershell |
||||
shell: pwsh |
||||
run: Get-Location |
||||
|
||||
- name: List files for the space (Windows) |
||||
run: | |
||||
Get-ChildItem -Path ${{ github.workspace }} |
||||
Get-ChildItem -Path ${{ runner.workspace }} |
||||
shell: pwsh |
||||
|
||||
- name: Uncompress source (Windows) |
||||
working-directory: ${{ github.workspace }} |
||||
run: 7z x ${{ steps.set-file-base.outputs.FILE_BASE }}.zip |
||||
shell: bash |
||||
|
||||
- name: Run ctest (Windows) |
||||
run: | |
||||
cd "${{ runner.workspace }}/hdf5/hdfsrc" |
||||
cmake --workflow --preset=ci-StdShar-MSVC --fresh |
||||
shell: bash |
||||
|
||||
- name: Publish binary (Windows) |
||||
id: publish-ctest-binary |
||||
run: | |
||||
mkdir "${{ runner.workspace }}/build" |
||||
mkdir "${{ runner.workspace }}/build/hdf5" |
||||
Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/COPYING -Destination ${{ runner.workspace }}/build/hdf5/ |
||||
Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 -Destination ${{ runner.workspace }}/build/hdf5/ |
||||
Copy-Item -Path ${{ runner.workspace }}/hdf5/hdfsrc/README.md -Destination ${{ runner.workspace }}/build/hdf5/ |
||||
Copy-Item -Path ${{ runner.workspace }}/hdf5/build/ci-StdShar-MSVC/* -Destination ${{ runner.workspace }}/build/hdf5/ -Include *.zip |
||||
cd "${{ runner.workspace }}/build" |
||||
7z a -tzip ${{ steps.set-file-base.outputs.FILE_BASE }}-win_vs2022.zip hdf5 |
||||
shell: pwsh |
||||
|
||||
- name: List files in the space (Windows) |
||||
run: | |
||||
Get-ChildItem -Path ${{ github.workspace }} |
||||
Get-ChildItem -Path ${{ runner.workspace }} |
||||
shell: pwsh |
||||
|
||||
# Save files created by ctest script |
||||
- name: Save published binary (Windows) |
||||
uses: actions/upload-artifact@v3 |
||||
with: |
||||
name: zip-vs2022-binary |
||||
path: ${{ runner.workspace }}/build/${{ steps.set-file-base.outputs.FILE_BASE }}-win_vs2022.zip |
||||
if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` |
||||
|
||||
build_and_test_linux: |
||||
# Linux (Ubuntu) w/ gcc + CMake |
||||
# |
||||
name: "Ubuntu gcc CMake" |
||||
runs-on: ubuntu-latest |
||||
steps: |
||||
- name: Install CMake Dependencies (Linux) |
||||
run: sudo apt-get install ninja-build |
||||
|
||||
- name: Set file base name (Linux) |
||||
id: set-file-base |
||||
run: | |
||||
FILE_NAME_BASE=$(echo "${{ inputs.file_base }}") |
||||
echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT |
||||
|
||||
# Get files created by release script |
||||
- name: Get tgz-tarball (Linux) |
||||
uses: actions/download-artifact@v3 |
||||
with: |
||||
name: tgz-tarball |
||||
path: ${{ github.workspace }} |
||||
|
||||
- name: List files for the space (Linux) |
||||
run: | |
||||
ls ${{ github.workspace }} |
||||
ls ${{ runner.workspace }} |
||||
|
||||
- name: Uncompress source (Linux) |
||||
run: tar -zxvf ${{ github.workspace }}/${{ steps.set-file-base.outputs.FILE_BASE }}.tar.gz |
||||
|
||||
- name: Run ctest (Linux) |
||||
run: | |
||||
cd "${{ runner.workspace }}/hdf5/hdfsrc" |
||||
cmake --workflow --preset=ci-StdShar-GNUC --fresh |
||||
shell: bash |
||||
|
||||
- name: Publish binary (Linux) |
||||
id: publish-ctest-binary |
||||
run: | |
||||
mkdir "${{ runner.workspace }}/build" |
||||
mkdir "${{ runner.workspace }}/build/hdf5" |
||||
cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING ${{ runner.workspace }}/build/hdf5 |
||||
cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 ${{ runner.workspace }}/build/hdf5 |
||||
cp ${{ runner.workspace }}/hdf5/hdfsrc/README.md ${{ runner.workspace }}/build/hdf5 |
||||
cp ${{ runner.workspace }}/hdf5/build/ci-StdShar-GNUC/*.tar.gz ${{ runner.workspace }}/build/hdf5 |
||||
cd "${{ runner.workspace }}/build" |
||||
tar -zcvf ${{ steps.set-file-base.outputs.FILE_BASE }}-ubuntu-2204.tar.gz hdf5 |
||||
shell: bash |
||||
|
||||
- name: List files in the space (Linux) |
||||
run: | |
||||
ls ${{ github.workspace }} |
||||
ls ${{ runner.workspace }} |
||||
|
||||
# Save files created by ctest script |
||||
- name: Save published binary (Linux) |
||||
uses: actions/upload-artifact@v3 |
||||
with: |
||||
name: tgz-ubuntu-2204-binary |
||||
path: ${{ runner.workspace }}/build/${{ steps.set-file-base.outputs.FILE_BASE }}-ubuntu-2204.tar.gz |
||||
if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` |
||||
|
||||
build_and_test_mac: |
||||
# MacOS w/ Clang + CMake |
||||
# |
||||
name: "MacOS Clang CMake" |
||||
runs-on: macos-11 |
||||
steps: |
||||
- name: Install Dependencies (MacOS) |
||||
run: brew install ninja |
||||
|
||||
- name: Set file base name (MacOS) |
||||
id: set-file-base |
||||
run: | |
||||
FILE_NAME_BASE=$(echo "${{ inputs.file_base }}") |
||||
echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT |
||||
|
||||
# Get files created by release script |
||||
- name: Get tgz-tarball (MacOS) |
||||
uses: actions/download-artifact@v3 |
||||
with: |
||||
name: tgz-tarball |
||||
path: ${{ github.workspace }} |
||||
|
||||
- name: List files for the space (MacOS) |
||||
run: | |
||||
ls ${{ github.workspace }} |
||||
ls ${{ runner.workspace }} |
||||
|
||||
- name: Uncompress source (MacOS) |
||||
run: tar -zxvf ${{ github.workspace }}/${{ steps.set-file-base.outputs.FILE_BASE }}.tar.gz |
||||
|
||||
# symlinks the compiler executables to a common location |
||||
- name: Setup GNU Fortran |
||||
uses: modflowpy/install-gfortran-action@v1 |
||||
|
||||
- name: Run ctest (MacOS) |
||||
id: run-ctest |
||||
run: | |
||||
cd "${{ runner.workspace }}/hdf5/hdfsrc" |
||||
cmake --workflow --preset=ci-StdShar-Clang --fresh |
||||
shell: bash |
||||
|
||||
- name: Publish binary (MacOS) |
||||
id: publish-ctest-binary |
||||
run: | |
||||
mkdir "${{ runner.workspace }}/build" |
||||
mkdir "${{ runner.workspace }}/build/hdf5" |
||||
cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING ${{ runner.workspace }}/build/hdf5 |
||||
cp ${{ runner.workspace }}/hdf5/hdfsrc/COPYING_LBNL_HDF5 ${{ runner.workspace }}/build/hdf5 |
||||
cp ${{ runner.workspace }}/hdf5/hdfsrc/README.md ${{ runner.workspace }}/build/hdf5 |
||||
cp ${{ runner.workspace }}/hdf5/build/ci-StdShar-Clang/*.tar.gz ${{ runner.workspace }}/build/hdf5 |
||||
cd "${{ runner.workspace }}/build" |
||||
tar -zcvf ${{ steps.set-file-base.outputs.FILE_BASE }}-osx12.tar.gz hdf5 |
||||
shell: bash |
||||
|
||||
- name: List files in the space (MacOS) |
||||
run: | |
||||
ls ${{ github.workspace }} |
||||
ls ${{ runner.workspace }} |
||||
|
||||
# Save files created by ctest script |
||||
- name: Save published binary (MacOS) |
||||
uses: actions/upload-artifact@v3 |
||||
with: |
||||
name: tgz-osx12-binary |
||||
path: ${{ runner.workspace }}/build/${{ steps.set-file-base.outputs.FILE_BASE }}-osx12.tar.gz |
||||
if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` |
||||
|
||||
@ -0,0 +1,15 @@ |
||||
# GitHub Action to automate the identification of common misspellings in text files |
||||
# https://github.com/codespell-project/codespell |
||||
# https://github.com/codespell-project/actions-codespell |
||||
name: codespell |
||||
on: [push, pull_request] |
||||
jobs: |
||||
codespell: |
||||
name: Check for spelling errors |
||||
runs-on: ubuntu-latest |
||||
steps: |
||||
- uses: actions/checkout@v3 |
||||
- uses: codespell-project/actions-codespell@master |
||||
with: |
||||
skip: ./.github/workflows/codespell.yml,./bin/trace,./hl/tools/h5watch/h5watch.c,./tools/test/h5jam/tellub.c,./config/sanitizer/LICENSE,./config/sanitizer/sanitizers.cmake,./tools/test/h5repack/testfiles/*.dat,./test/API/driver,./configure,./bin/ltmain.sh,./bin/depcomp,./bin/config.guess,./bin/config.sub,./autom4te.cache,./m4/libtool.m4,./c++/src/*.html |
||||
ignore_words_list: ot,isnt,inout,nd,parms,parm,ba,offsetP,ser,ois,had,fiter,fo,clude,refere,minnum,offsetp,creat,ans:,eiter,lastr,ans,isn't,ifset,sur,trun,dne,tthe,hda,filname,te,htmp,ake,gord,numer,ro,oce,msdos |
||||
@ -0,0 +1,21 @@ |
||||
name: hdf5 dev daily build |
||||
|
||||
# Controls when the action will run. Triggers the workflow on a schedule |
||||
on: |
||||
workflow_dispatch: |
||||
schedule: |
||||
- cron: "6 0 * * *" |
||||
|
||||
# A workflow run is made up of one or more jobs that can run sequentially or |
||||
# in parallel. |
||||
jobs: |
||||
call-workflow-tarball: |
||||
uses: ./.github/workflows/tarball.yml |
||||
|
||||
call-workflow-ctest: |
||||
needs: call-workflow-tarball |
||||
uses: ./.github/workflows/cmake-ctest.yml |
||||
with: |
||||
file_base: ${{ needs.call-workflow-tarball.outputs.file_base }} |
||||
if: ${{ needs.call-workflow-tarball.outputs.has_changes == 'true' }} |
||||
|
||||
@ -0,0 +1,47 @@ |
||||
name: hdfeos5 |
||||
|
||||
on: |
||||
workflow_dispatch: |
||||
push: |
||||
pull_request: |
||||
branches: [ develop ] |
||||
paths-ignore: |
||||
- '.github/CODEOWNERS' |
||||
- '.github/FUNDING.yml' |
||||
- 'doc/**' |
||||
- 'release_docs/**' |
||||
- 'ACKNOWLEDGEMENTS' |
||||
- 'COPYING**' |
||||
- '**.md' |
||||
|
||||
# Using concurrency to cancel any in-progress job or run |
||||
concurrency: |
||||
group: ${{ github.workflow }}-${{ github.sha || github.event.pull_request.number }} |
||||
cancel-in-progress: true |
||||
|
||||
jobs: |
||||
build: |
||||
name: Build hdfeos5 |
||||
runs-on: ubuntu-latest |
||||
steps: |
||||
- uses: actions/checkout@v3 |
||||
|
||||
- name: Install Autotools Dependencies (Linux) |
||||
run: | |
||||
sudo apt update |
||||
sudo apt install automake autoconf libtool libtool-bin |
||||
- name: Install HDF5 |
||||
run: | |
||||
./autogen.sh |
||||
./configure --prefix=/usr/local --with-default-api-version=v16 |
||||
make |
||||
sudo make install |
||||
- name: Install HDF-EOS5 |
||||
run: | |
||||
wget -O HDF-EOS5.2.0.tar.gz "https://git.earthdata.nasa.gov/projects/DAS/repos/hdfeos5/raw/hdf-eos5-2.0-src.tar.gz?at=refs%2Fheads%2FHDFEOS5_2.0" |
||||
tar zxvf HDF-EOS5.2.0.tar.gz |
||||
cd hdf-eos5-2.0 |
||||
./configure CC=/usr/local/bin/h5cc --prefix=/usr/local/ --enable-install-include |
||||
make |
||||
make check |
||||
sudo make install |
||||
@ -0,0 +1,530 @@ |
||||
name: hdf5 dev CI |
||||
|
||||
# Controls when the action will run. Triggers the workflow on push or pull request |
||||
on: |
||||
workflow_dispatch: |
||||
push: |
||||
pull_request: |
||||
branches: [ hdf5_1_14 ] |
||||
paths-ignore: |
||||
- '.github/CODEOWNERS' |
||||
- '.github/FUNDING.yml' |
||||
- 'doc/**' |
||||
- 'release_docs/**' |
||||
- 'ACKNOWLEDGEMENTS' |
||||
- 'COPYING**' |
||||
- '**.md' |
||||
|
||||
# Using concurrency to cancel any in-progress job or run |
||||
concurrency: |
||||
group: ${{ github.workflow }}-${{ github.sha || github.event.pull_request.number }} |
||||
cancel-in-progress: true |
||||
|
||||
# A workflow run is made up of one or more jobs that can run sequentially or |
||||
# in parallel. We just have one job, but the matrix items defined below will |
||||
# run in parallel. |
||||
jobs: |
||||
|
||||
# A workflow that builds the library and runs all the tests |
||||
build_and_test: |
||||
|
||||
strategy: |
||||
|
||||
# The current matrix has three dimensions: |
||||
# |
||||
# * config name |
||||
# * thread-safety on/off |
||||
# * release vs. debug build |
||||
# |
||||
# Most configuration information is added via the 'include' mechanism, |
||||
# which will append the key-value pairs in the configuration where the |
||||
# names match. |
||||
|
||||
matrix: |
||||
|
||||
name: |
||||
- "Windows MSVC CMake" |
||||
- "Ubuntu gcc CMake" |
||||
- "Ubuntu gcc Autotools" |
||||
- "Ubuntu gcc Autotools parallel (build only)" |
||||
- "MacOS Clang CMake" |
||||
|
||||
thread_safety: |
||||
- enabled: true |
||||
text: " TS" |
||||
- enabled: false |
||||
text: "" |
||||
|
||||
build_mode: |
||||
- text: " REL" |
||||
cmake: "Release" |
||||
autotools: "production" |
||||
- text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
# This is where we list the bulk of the options for each configuration. |
||||
# The key-value pair values are usually appropriate for being CMake or |
||||
# Autotools configure values, so be aware of that. |
||||
|
||||
include: |
||||
|
||||
# Windows w/ MSVC + CMake |
||||
# |
||||
# No Fortran, parallel, or VFDs that rely on POSIX things |
||||
- name: "Windows MSVC CMake" |
||||
os: windows-2022 |
||||
toolchain: "" |
||||
cpp: ON |
||||
fortran: OFF |
||||
java: ON |
||||
libaecfc: ON |
||||
zlibfc: ON |
||||
parallel: OFF |
||||
mirror_vfd: OFF |
||||
direct_vfd: OFF |
||||
generator: "-G \"Visual Studio 17 2022\" -A x64" |
||||
run_tests: true |
||||
|
||||
# Linux (Ubuntu) w/ gcc + CMake |
||||
# |
||||
# We might think about adding Clang, but MacOS already tests that |
||||
# so it's not critical |
||||
- name: "Ubuntu gcc CMake" |
||||
os: ubuntu-latest |
||||
cpp: ON |
||||
fortran: ON |
||||
java: ON |
||||
libaecfc: ON |
||||
zlibfc: ON |
||||
parallel: OFF |
||||
mirror_vfd: ON |
||||
direct_vfd: ON |
||||
toolchain: "config/toolchain/gcc.cmake" |
||||
generator: "-G Ninja" |
||||
run_tests: true |
||||
|
||||
# Linux (Ubuntu) w/ gcc + Autotools |
||||
# |
||||
# Keep this identical to the CMake configs. Note the difference in |
||||
# the values. |
||||
- name: "Ubuntu gcc Autotools" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: enable |
||||
java: enable |
||||
parallel: disable |
||||
mirror_vfd: enable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v114 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "" |
||||
run_tests: true |
||||
|
||||
# Parallel Linux (Ubuntu) w/ gcc + Autotools |
||||
# |
||||
# The GitHub runners are inadequate for running parallel HDF5 tests, |
||||
# so we catch most issues in daily testing. What we have here is just |
||||
# a compile check to make sure nothing obvious is broken. |
||||
- name: "Ubuntu gcc Autotools parallel (build only)" |
||||
os: ubuntu-latest |
||||
cpp: disable |
||||
fortran: enable |
||||
java: disable |
||||
parallel: enable |
||||
mirror_vfd: disable |
||||
direct_vfd: disable |
||||
deprec_sym: enable |
||||
default_api: v114 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "CC=mpicc" |
||||
run_tests: false |
||||
|
||||
# MacOS w/ Clang + CMake |
||||
# |
||||
# We could also build with the Autotools via brew installing them, |
||||
# but that seems unnecessary |
||||
- name: "MacOS Clang CMake" |
||||
os: macos-11 |
||||
cpp: ON |
||||
fortran: OFF |
||||
java: ON |
||||
libaecfc: ON |
||||
zlibfc: ON |
||||
parallel: OFF |
||||
mirror_vfd: ON |
||||
direct_vfd: OFF |
||||
toolchain: "config/toolchain/clang.cmake" |
||||
generator: "-G Ninja" |
||||
run_tests: true |
||||
|
||||
|
||||
# |
||||
# SPECIAL AUTOTOOLS BUILDS |
||||
# |
||||
# These do not run tests and are not built into the matrix and instead |
||||
# become NEW configs as their name would clobber one of the matrix |
||||
# names (so make sure the names are UNIQUE). |
||||
# |
||||
|
||||
- name: "Ubuntu gcc Autotools v1.6 default API (build only)" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: enable |
||||
java: enable |
||||
parallel: disable |
||||
mirror_vfd: enable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v16 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
- name: "Ubuntu gcc Autotools v1.8 default API (build only)" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: enable |
||||
java: enable |
||||
parallel: disable |
||||
mirror_vfd: enable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v18 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
- name: "Ubuntu gcc Autotools v1.10 default API (build only)" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: enable |
||||
java: enable |
||||
parallel: disable |
||||
mirror_vfd: enable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v110 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
- name: "Ubuntu gcc Autotools v1.12 default API (build only)" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: enable |
||||
java: enable |
||||
parallel: disable |
||||
mirror_vfd: enable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v112 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
- name: "Ubuntu gcc Autotools no deprecated symbols (build only)" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: enable |
||||
java: enable |
||||
parallel: disable |
||||
mirror_vfd: enable |
||||
direct_vfd: enable |
||||
deprec_sym: disable |
||||
default_api: default |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
- name: "Ubuntu gcc Autotools -Werror (build only)" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: disable |
||||
java: disable |
||||
parallel: disable |
||||
mirror_vfd: disable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v114 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "CFLAGS=-Werror" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
- name: "Ubuntu gcc Autotools -Werror (build only)" |
||||
os: ubuntu-latest |
||||
cpp: enable |
||||
fortran: disable |
||||
java: disable |
||||
parallel: disable |
||||
mirror_vfd: disable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v114 |
||||
szip: yes |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "CFLAGS=-Werror" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " REL" |
||||
cmake: "Release" |
||||
autotools: "production" |
||||
|
||||
# Parallel Debug -Werror |
||||
- name: "Ubuntu gcc Autotools parallel -Werror (build only)" |
||||
os: ubuntu-latest |
||||
cpp: disable |
||||
fortran: disable |
||||
java: disable |
||||
parallel: enable |
||||
mirror_vfd: disable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v114 |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "CFLAGS=-Werror" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " DBG" |
||||
cmake: "Debug" |
||||
autotools: "debug" |
||||
|
||||
# Parallel production/release -Werror |
||||
- name: "Ubuntu gcc Autotools parallel -Werror (build only)" |
||||
os: ubuntu-latest |
||||
cpp: disable |
||||
fortran: disable |
||||
java: disable |
||||
parallel: enable |
||||
mirror_vfd: disable |
||||
direct_vfd: enable |
||||
deprec_sym: enable |
||||
default_api: v114 |
||||
toolchain: "" |
||||
generator: "autogen" |
||||
flags: "CFLAGS=-Werror" |
||||
run_tests: false |
||||
thread_safety: |
||||
enabled: false |
||||
text: "" |
||||
build_mode: |
||||
text: " REL" |
||||
cmake: "Release" |
||||
autotools: "production" |
||||
|
||||
# Sets the job's name from the properties |
||||
name: "${{ matrix.name }}${{ matrix.build_mode.text }}${{ matrix.thread_safety.text }}" |
||||
|
||||
# Don't run the action if the commit message says to skip CI |
||||
if: "!contains(github.event.head_commit.message, 'skip-ci')" |
||||
|
||||
# The type of runner that the job will run on |
||||
runs-on: ${{ matrix.os }} |
||||
|
||||
# Steps represent a sequence of tasks that will be executed as part of the job |
||||
steps: |
||||
|
||||
# |
||||
# SETUP |
||||
# |
||||
|
||||
#Useful for debugging |
||||
- name: Dump matrix context |
||||
run: echo '${{ toJSON(matrix) }}' |
||||
|
||||
- name: Install CMake Dependencies (Linux) |
||||
run: sudo apt-get install ninja-build |
||||
if: matrix.os == 'ubuntu-latest' |
||||
|
||||
- name: Install Autotools Dependencies (Linux, serial) |
||||
run: | |
||||
sudo apt update |
||||
sudo apt install automake autoconf libtool libtool-bin |
||||
sudo apt install gcc-11 g++-11 gfortran-11 |
||||
echo "CC=gcc-11" >> $GITHUB_ENV |
||||
echo "CXX=g++-11" >> $GITHUB_ENV |
||||
echo "FC=gfortran-11" >> $GITHUB_ENV |
||||
sudo apt install libaec0 libaec-dev |
||||
if: (matrix.generator == 'autogen') && (matrix.parallel != 'enable') |
||||
|
||||
- name: Install Autotools Dependencies (Linux, parallel) |
||||
run: | |
||||
sudo apt update |
||||
sudo apt install automake autoconf libtool libtool-bin |
||||
sudo apt install openmpi-bin openmpi-common mpi-default-dev |
||||
echo "CC=mpicc" >> $GITHUB_ENV |
||||
echo "FC=mpif90" >> $GITHUB_ENV |
||||
sudo apt install libaec0 libaec-dev |
||||
if: (matrix.generator == 'autogen') && (matrix.parallel == 'enable') |
||||
|
||||
- name: Install Dependencies (Windows) |
||||
run: choco install ninja |
||||
if: matrix.os == 'windows-latest' |
||||
|
||||
- name: Install Dependencies (macOS) |
||||
run: brew install ninja |
||||
if: matrix.os == 'macos-11' |
||||
|
||||
- name: Set environment for MSVC (Windows) |
||||
run: | |
||||
# Set these environment variables so CMake picks the correct compiler |
||||
echo "CXX=cl.exe" >> $GITHUB_ENV |
||||
echo "CC=cl.exe" >> $GITHUB_ENV |
||||
if: matrix.os == 'windows-latest' |
||||
|
||||
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it |
||||
- name: Get Sources |
||||
uses: actions/checkout@v3 |
||||
|
||||
# |
||||
# AUTOTOOLS CONFIGURE |
||||
# |
||||
|
||||
- name: Autotools Configure |
||||
run: | |
||||
sh ./autogen.sh |
||||
mkdir "${{ runner.workspace }}/build" |
||||
cd "${{ runner.workspace }}/build" |
||||
${{ matrix.flags }} $GITHUB_WORKSPACE/configure --enable-build-mode=${{ matrix.build_mode.autotools }} --${{ matrix.deprec_sym }}-deprecated-symbols --with-default-api-version=${{ matrix.default_api }} --enable-shared --${{ matrix.parallel }}-parallel --${{ matrix.cpp }}-cxx --${{ matrix.fortran }}-fortran --${{ matrix.java }}-java --${{ matrix.mirror_vfd }}-mirror-vfd --${{ matrix.direct_vfd }}-direct-vfd --with-szlib=${{ matrix.szip }} |
||||
shell: bash |
||||
if: (matrix.generator == 'autogen') && (! matrix.thread_safe.enabled) |
||||
|
||||
- name: Autotools Configure (Thread-Safe) |
||||
run: | |
||||
sh ./autogen.sh |
||||
mkdir "${{ runner.workspace }}/build" |
||||
cd "${{ runner.workspace }}/build" |
||||
${{ matrix.flags }} $GITHUB_WORKSPACE/configure --enable-build-mode=${{ matrix.build_mode.autotools }} --enable-shared --enable-threadsafe --disable-hl --${{ matrix.parallel }}-parallel --${{ matrix.mirror_vfd }}-mirror-vfd --${{ matrix.direct_vfd }}-direct-vfd --with-szlib=${{ matrix.szip }} |
||||
shell: bash |
||||
if: (matrix.generator == 'autogen') && (matrix.thread_safe.enabled) |
||||
|
||||
# |
||||
# CMAKE CONFIGURE |
||||
# |
||||
|
||||
- name: CMake Configure |
||||
run: | |
||||
mkdir "${{ runner.workspace }}/build" |
||||
cd "${{ runner.workspace }}/build" |
||||
cmake ${{ matrix.generator }} -DCMAKE_BUILD_TYPE=${{ matrix.build_mode.cmake }} -DCMAKE_TOOLCHAIN_FILE=${{ matrix.toolchain }} -DBUILD_SHARED_LIBS=ON -DHDF5_ENABLE_ALL_WARNINGS=ON -DHDF5_ENABLE_PARALLEL:BOOL=${{ matrix.parallel }} -DHDF5_BUILD_CPP_LIB:BOOL=${{ matrix.cpp }} -DHDF5_BUILD_FORTRAN=${{ matrix.fortran }} -DHDF5_BUILD_JAVA=${{ matrix.java }} -DBUILD_SZIP_WITH_FETCHCONTENT=${{ matrix.libaecfc }} -DBUILD_ZLIB_WITH_FETCHCONTENT=${{ matrix.zlibfc }} -DHDF5_ENABLE_MIRROR_VFD:BOOL=${{ matrix.mirror_vfd }} -DHDF5_ENABLE_DIRECT_VFD:BOOL=${{ matrix.direct_vfd }} $GITHUB_WORKSPACE |
||||
shell: bash |
||||
if: (matrix.generator != 'autogen') && (! matrix.thread_safe.enabled) |
||||
|
||||
|
||||
- name: CMake Configure (Thread-Safe) |
||||
run: | |
||||
mkdir "${{ runner.workspace }}/build" |
||||
cd "${{ runner.workspace }}/build" |
||||
cmake ${{ matrix.generator }} -DCMAKE_BUILD_TYPE=${{ matrix.build_mode.cmake }} -DCMAKE_TOOLCHAIN_FILE=${{ matrix.toolchain }} -DBUILD_SHARED_LIBS=ON -DHDF5_ENABLE_ALL_WARNINGS=ON -DHDF5_ENABLE_THREADSAFE:BOOL=ON -DHDF5_ENABLE_PARALLEL:BOOL=${{ matrix.parallel }} -DHDF5_BUILD_HL_LIB:BOOL=OFF -DHDF5_ENABLE_MIRROR_VFD:BOOL=${{ matrix.mirror_vfd }} -DHDF5_ENABLE_DIRECT_VFD:BOOL=${{ matrix.direct_vfd }} $GITHUB_WORKSPACE |
||||
shell: bash |
||||
if: (matrix.generator != 'autogen') && (matrix.thread_safe.enabled) |
||||
|
||||
# |
||||
# BUILD |
||||
# |
||||
|
||||
- name: Autotools Build |
||||
run: make -j3 |
||||
working-directory: ${{ runner.workspace }}/build |
||||
if: matrix.generator == 'autogen' |
||||
|
||||
- name: CMake Build |
||||
run: cmake --build . --parallel 3 --config ${{ matrix.build_mode.cmake }} |
||||
working-directory: ${{ runner.workspace }}/build |
||||
if: matrix.generator != 'autogen' |
||||
|
||||
# |
||||
# RUN TESTS |
||||
# |
||||
|
||||
- name: Autotools Run Tests |
||||
run: make check -j2 |
||||
working-directory: ${{ runner.workspace }}/build |
||||
if: (matrix.generator == 'autogen') && (matrix.run_tests) |
||||
|
||||
- name: CMake Run Tests |
||||
run: ctest --build . --parallel 2 -C ${{ matrix.build_mode.cmake }} -V |
||||
working-directory: ${{ runner.workspace }}/build |
||||
# Skip Debug MSVC while we investigate H5L Java test timeouts |
||||
if: (matrix.generator != 'autogen') && (matrix.run_tests) && ! ((matrix.name == 'Windows MSVC CMake') && (matrix.build_mode.cmake == 'Debug')) |
||||
|
||||
# |
||||
# INSTALL (note that this runs even when we don't run the tests) |
||||
# |
||||
|
||||
- name: Autotools Install |
||||
run: make install |
||||
working-directory: ${{ runner.workspace }}/build |
||||
if: (matrix.generator == 'autogen') |
||||
|
||||
- name: Autotools Verify Install |
||||
run: make check-install |
||||
working-directory: ${{ runner.workspace }}/build |
||||
if: (matrix.generator == 'autogen') |
||||
@ -0,0 +1,105 @@ |
||||
name: hdf5 dev tarball |
||||
|
||||
# Controls when the action will run. Triggers the workflow on a schedule |
||||
on: |
||||
workflow_call: |
||||
outputs: |
||||
has_changes: |
||||
description: "Whether there were changes the previous day" |
||||
value: ${{ jobs.check_commits.outputs.has_changes }} |
||||
file_base: |
||||
description: "The common base name of the source tarballs" |
||||
value: ${{ jobs.create_tarball.outputs.file_base }} |
||||
|
||||
# A workflow run is made up of one or more jobs that can run sequentially or |
||||
# in parallel |
||||
jobs: |
||||
check_commits: |
||||
name: Check for recent commits |
||||
runs-on: ubuntu-latest |
||||
outputs: |
||||
has_changes: ${{ steps.check-new-commits.outputs.has-new-commits }} |
||||
branch_ref: ${{ steps.get-branch-name.outputs.BRANCH_REF }} |
||||
branch_sha: ${{ steps.get-branch-sha.outputs.BRANCH_SHA }} |
||||
steps: |
||||
- name: Get branch name |
||||
id: get-branch-name |
||||
env: |
||||
GITHUB_REF: ${{ github.ref }} |
||||
GITHUB_REF_NAME: ${{ github.ref_name }} |
||||
GITHUB_HEAD_REF: ${{ github.head_ref }} |
||||
#run: echo "${{ env.GITHUB_REF_NAME }} | grep -P '[0-9]+/merge' &> /dev/null && BRANCH_REF=${{ env.GITHUB_HEAD_REF }} || BRANCH_REF=${{ env.GITHUB_REF_NAME }}" >> $GITHUB_OUTPUT |
||||
run: echo "BRANCH_REF=${{ env.GITHUB_HEAD_REF || env.GITHUB_REF_NAME }}" >> $GITHUB_OUTPUT |
||||
|
||||
- name: Get branch sha |
||||
id: get-branch-sha |
||||
env: |
||||
GITHUB_SHA: ${{ github.sha }} |
||||
GITHUB_WF_SHA: ${{ github.workflow_sha }} |
||||
run: | |
||||
SHORT_SHA=$(echo "${{ env.GITHUB_WF_SHA }}" | cut -c1-7) |
||||
echo "BRANCH_SHA=$SHORT_SHA" >> $GITHUB_OUTPUT |
||||
|
||||
- name: Check for changed source |
||||
id: check-new-commits |
||||
uses: adriangl/check-new-commits-action@v1 |
||||
with: |
||||
seconds: 86400 # One day in seconds |
||||
branch: '${{ steps.get-branch-name.outputs.branch_ref }}' |
||||
|
||||
- run: echo "You have ${{ steps.check-new-commits.outputs.new-commits-number }} new commit(s) in ${{ steps.get-branch-name.outputs.BRANCH_REF }} ✅!" |
||||
if: ${{ steps.check-new-commits.outputs.has-new-commits == 'true' }} |
||||
|
||||
- run: echo "Short commit sha is ${{ steps.get-branch-sha.outputs.BRANCH_SHA }}!" |
||||
|
||||
create_tarball: |
||||
name: Create a source tarball |
||||
runs-on: ubuntu-latest |
||||
needs: check_commits |
||||
if: ${{ needs.check_commits.outputs.has_changes == 'true' }} |
||||
outputs: |
||||
file_base: ${{ steps.set-file-base.outputs.FILE_BASE }} |
||||
steps: |
||||
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it |
||||
- name: Get Sources |
||||
uses: actions/checkout@v3 |
||||
with: |
||||
path: hdfsrc |
||||
|
||||
- name: Install Autotools Dependencies (Linux, serial) |
||||
run: | |
||||
sudo apt update |
||||
sudo apt install automake autoconf libtool libtool-bin gzip dos2unix |
||||
|
||||
- name: Set file base name |
||||
id: set-file-base |
||||
run: | |
||||
FILE_NAME_BASE=$(echo "hdf5-${{ needs.check_commits.outputs.branch_ref }}-${{ needs.check_commits.outputs.branch_sha }}") |
||||
echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT |
||||
|
||||
- name: Run release script |
||||
id: run-release-script |
||||
run: | |
||||
cd "$GITHUB_WORKSPACE/hdfsrc" |
||||
bin/bbrelease -d $GITHUB_WORKSPACE --branch ${{ needs.check_commits.outputs.branch_ref }} --revision gzip zip |
||||
shell: bash |
||||
|
||||
- name: List files in the repository |
||||
run: | |
||||
ls ${{ github.workspace }} |
||||
ls $GITHUB_WORKSPACE |
||||
|
||||
# Save files created by release script |
||||
- name: Save tgz-tarball |
||||
uses: actions/upload-artifact@v3 |
||||
with: |
||||
name: tgz-tarball |
||||
path: ${{ steps.set-file-base.outputs.FILE_BASE }}.tar.gz |
||||
if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` |
||||
|
||||
- name: Save zip-tarball |
||||
uses: actions/upload-artifact@v3 |
||||
with: |
||||
name: zip-tarball |
||||
path: ${{ steps.set-file-base.outputs.FILE_BASE }}.zip |
||||
if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn` |
||||
@ -0,0 +1,53 @@ |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
|
||||
# Initialization files for the Copyright Checker, chkcopyright. |
||||
# Each line is a keyword for action and the rest are values. |
||||
# Keywords: |
||||
# '#' Comments |
||||
# skip Files to be skipped |
||||
# prune Directories to be skipped. Notice this prunes all directories |
||||
# with the same name. E.g., |
||||
# "prune test" skips test, fortran/test, c++/test, ... |
||||
|
||||
# Skip COPYING since it is the detail Copyright notice. |
||||
skip COPYING |
||||
|
||||
# Sort of strange to have a copyright notice in README |
||||
skip README |
||||
|
||||
# Non-UI copyrighted files in top-level |
||||
skip aclocal.m4 |
||||
|
||||
# Non-UI copyrighted files in bin. |
||||
skip config.guess |
||||
skip config.sub |
||||
skip depcomp |
||||
skip install-sh |
||||
skip ltmain.sh |
||||
skip missing |
||||
skip mkinstalldirs |
||||
|
||||
# Generated files in top-level |
||||
skip configure |
||||
|
||||
# Generated files in src. |
||||
skip H5config.h.in |
||||
|
||||
# Generated files in fortran/src. |
||||
skip H5match_types.c |
||||
skip H5test_kind.f90 |
||||
|
||||
# Ignore this expected output file in windows/examples. |
||||
skip testExamples_exp_output.txt |
||||
|
||||
# Skip all testfiles/* since if we insert a copyright notice in the expected |
||||
# data files, we would have to spend extra effort to filter them out. |
||||
prune testfiles |
||||
@ -0,0 +1,18 @@ |
||||
Acknowledgments - November 2010 |
||||
------------------------------- |
||||
|
||||
We would like to thank the following people who have contributed directly |
||||
or indirectly to HDF5: |
||||
|
||||
Werner Benger, for contributing code used to add support for the Windows |
||||
Threading library included in the 1.8.6 release. |
||||
|
||||
John A. Biddiscombe, Mike Jackson, and Sean McBride for contributing and |
||||
testing CMake code included in the HDF5 1.8.5 distribution. |
||||
|
||||
The HDF5 community for helping shape the development of HDF5 by contributing |
||||
bug reports and patches, joining in on forum discussions, and continually |
||||
supporting our software. |
||||
|
||||
Finally, we'd like to thank all organizations whose funding has made HDF5 |
||||
possible. |
||||
@ -0,0 +1,189 @@ |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
option (USE_LIBAEC_STATIC "Use static AEC library " OFF) |
||||
option (ZLIB_USE_EXTERNAL "Use External Library Building for ZLIB" 0) |
||||
option (SZIP_USE_EXTERNAL "Use External Library Building for SZIP" 0) |
||||
|
||||
option (BUILD_ZLIB_WITH_FETCHCONTENT "Use FetchContent to use original source files" OFF) |
||||
if (BUILD_ZLIB_WITH_FETCHCONTENT) |
||||
set (ZLIB_USE_EXTERNAL "Use External Library Building for ZLIB" 1) |
||||
if (NOT ZLIB_USE_LOCALCONTENT) |
||||
set (ZLIB_URL ${ZLIB_TGZ_ORIGPATH}/${ZLIB_TGZ_ORIGNAME}) |
||||
else () |
||||
set (ZLIB_URL ${TGZPATH}/${ZLIB_TGZ_ORIGNAME}) |
||||
endif () |
||||
if (CMAKE_VERSION VERSION_GREATER_EQUAL "3.15.0") |
||||
message (VERBOSE "Filter ZLIB file is ${ZLIB_URL}") |
||||
endif () |
||||
endif () |
||||
|
||||
option (BUILD_SZIP_WITH_FETCHCONTENT "Use FetchContent to use original source files" OFF) |
||||
if (BUILD_SZIP_WITH_FETCHCONTENT) |
||||
set (SZIP_USE_EXTERNAL "Use External Library Building for SZIP" 1) |
||||
if (NOT LIBAEC_USE_LOCALCONTENT) |
||||
set (SZIP_URL ${LIBAEC_TGZ_ORIGPATH}/${LIBAEC_TGZ_ORIGNAME}) |
||||
else () |
||||
set (SZIP_URL ${TGZPATH}/${LIBAEC_TGZ_ORIGNAME}) |
||||
endif () |
||||
if (CMAKE_VERSION VERSION_GREATER_EQUAL "3.15.0") |
||||
message (VERBOSE "Filter SZIP file is ${SZIP_URL}") |
||||
endif () |
||||
endif () |
||||
|
||||
include (ExternalProject) |
||||
#option (HDF5_ALLOW_EXTERNAL_SUPPORT "Allow External Library Building (NO GIT TGZ)" "NO") |
||||
set (HDF5_ALLOW_EXTERNAL_SUPPORT "NO" CACHE STRING "Allow External Library Building (NO GIT TGZ)") |
||||
set_property (CACHE HDF5_ALLOW_EXTERNAL_SUPPORT PROPERTY STRINGS NO GIT TGZ) |
||||
if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
set (ZLIB_USE_EXTERNAL "Use External Library Building for ZLIB" 1) |
||||
set (SZIP_USE_EXTERNAL "Use External Library Building for SZIP" 1) |
||||
if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT") |
||||
set (ZLIB_URL ${ZLIB_GIT_URL} CACHE STRING "Path to zlib git repository") |
||||
set (ZLIB_BRANCH ${ZLIB_GIT_BRANCH}) |
||||
set (SZIP_URL ${SZIP_GIT_URL} CACHE STRING "Path to szip git repository") |
||||
set (SZIP_BRANCH ${SZIP_GIT_BRANCH}) |
||||
elseif (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
if (NOT TGZPATH) |
||||
set (TGZPATH ${HDF5_SOURCE_DIR}) |
||||
endif () |
||||
if (NOT BUILD_ZLIB_WITH_FETCHCONTENT) |
||||
set (ZLIB_URL ${TGZPATH}/${ZLIB_TGZ_NAME}) |
||||
endif () |
||||
if (NOT EXISTS "${ZLIB_URL}") |
||||
set (HDF5_ENABLE_Z_LIB_SUPPORT OFF CACHE BOOL "" FORCE) |
||||
message (VERBOSE "Filter ZLIB file ${ZLIB_URL} not found") |
||||
endif () |
||||
if (NOT BUILD_SZIP_WITH_FETCHCONTENT) |
||||
set (SZIP_URL ${TGZPATH}/${SZAEC_TGZ_NAME}) |
||||
endif () |
||||
if (NOT EXISTS "${SZIP_URL}") |
||||
set (HDF5_ENABLE_SZIP_SUPPORT OFF CACHE BOOL "" FORCE) |
||||
message (VERBOSE "Filter SZIP file ${SZIP_URL} not found") |
||||
endif () |
||||
else () |
||||
set (ZLIB_USE_EXTERNAL 0) |
||||
set (SZIP_USE_EXTERNAL 0) |
||||
endif () |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Option for ZLib support |
||||
#----------------------------------------------------------------------------- |
||||
option (HDF5_ENABLE_Z_LIB_SUPPORT "Enable Zlib Filters" OFF) |
||||
if (HDF5_ENABLE_Z_LIB_SUPPORT) |
||||
if (NOT H5_ZLIB_HEADER) |
||||
if (NOT ZLIB_USE_EXTERNAL) |
||||
find_package (ZLIB NAMES ${ZLIB_PACKAGE_NAME}${HDF_PACKAGE_EXT} COMPONENTS static shared) |
||||
if (NOT ZLIB_FOUND) |
||||
find_package (ZLIB) # Legacy find |
||||
endif () |
||||
if (ZLIB_FOUND) |
||||
set (H5_HAVE_FILTER_DEFLATE 1) |
||||
set (H5_HAVE_ZLIB_H 1) |
||||
set (H5_HAVE_LIBZ 1) |
||||
set (H5_ZLIB_HEADER "zlib.h") |
||||
set (ZLIB_INCLUDE_DIR_GEN ${ZLIB_INCLUDE_DIR}) |
||||
set (ZLIB_INCLUDE_DIRS ${ZLIB_INCLUDE_DIRS} ${ZLIB_INCLUDE_DIR}) |
||||
set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${ZLIB_LIBRARIES}) |
||||
endif () |
||||
else () |
||||
if (BUILD_ZLIB_WITH_FETCHCONTENT) |
||||
# Only tgz files available |
||||
ORIGINAL_ZLIB_LIBRARY ("TGZ") |
||||
set (H5_HAVE_FILTER_DEFLATE 1) |
||||
set (H5_HAVE_ZLIB_H 1) |
||||
set (H5_HAVE_LIBZ 1) |
||||
message (VERBOSE "HDF5_ZLIB is built from fetch content") |
||||
set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${ZLIB_STATIC_LIBRARY}) |
||||
elseif (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
EXTERNAL_ZLIB_LIBRARY (${HDF5_ALLOW_EXTERNAL_SUPPORT}) |
||||
set (H5_HAVE_FILTER_DEFLATE 1) |
||||
set (H5_HAVE_ZLIB_H 1) |
||||
set (H5_HAVE_LIBZ 1) |
||||
message (VERBOSE "Filter HDF5_ZLIB is built") |
||||
set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${ZLIB_STATIC_LIBRARY}) |
||||
else () |
||||
message (FATAL_ERROR " ZLib is Required for ZLib support in HDF5") |
||||
endif () |
||||
endif () |
||||
else () |
||||
# This project is being called from within another and ZLib is already configured |
||||
set (H5_HAVE_FILTER_DEFLATE 1) |
||||
set (H5_HAVE_ZLIB_H 1) |
||||
set (H5_HAVE_LIBZ 1) |
||||
endif () |
||||
if (H5_HAVE_FILTER_DEFLATE) |
||||
set (EXTERNAL_FILTERS "${EXTERNAL_FILTERS} DEFLATE") |
||||
endif () |
||||
INCLUDE_DIRECTORIES (${ZLIB_INCLUDE_DIRS}) |
||||
message (VERBOSE "Filter HDF5_ZLIB is ON") |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Option for SzLib support |
||||
#----------------------------------------------------------------------------- |
||||
option (HDF5_ENABLE_SZIP_SUPPORT "Use SZip Filter" OFF) |
||||
if (HDF5_ENABLE_SZIP_SUPPORT) |
||||
option (HDF5_ENABLE_SZIP_ENCODING "Use SZip Encoding" OFF) |
||||
if (NOT SZIP_USE_EXTERNAL) |
||||
set(SZIP_FOUND FALSE) |
||||
set(libaec_USE_STATIC_LIBS ${USE_LIBAEC_STATIC}) |
||||
find_package (libaec 1.0.5 CONFIG) |
||||
if (SZIP_FOUND) |
||||
set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${SZIP_LIBRARIES}) |
||||
endif () |
||||
if (NOT SZIP_FOUND) |
||||
find_package (SZIP NAMES ${LIBAEC_PACKAGE_NAME}${HDF_PACKAGE_EXT} COMPONENTS static shared) |
||||
if (NOT SZIP_FOUND) |
||||
find_package (SZIP) # Legacy find |
||||
endif () |
||||
if (SZIP_FOUND) |
||||
set (H5_HAVE_FILTER_SZIP 1) |
||||
set (H5_HAVE_SZLIB_H 1) |
||||
set (H5_HAVE_LIBSZ 1) |
||||
set (SZIP_INCLUDE_DIR_GEN ${SZIP_INCLUDE_DIR}) |
||||
set (SZIP_INCLUDE_DIRS ${SZIP_INCLUDE_DIRS} ${SZIP_INCLUDE_DIR}) |
||||
set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${SZIP_LIBRARIES}) |
||||
endif () |
||||
endif () |
||||
else () |
||||
if (BUILD_SZIP_WITH_FETCHCONTENT) |
||||
# Only tgz files available |
||||
ORIGINAL_SZIP_LIBRARY ("TGZ" ${HDF5_ENABLE_SZIP_ENCODING}) |
||||
set (H5_HAVE_FILTER_SZIP 1) |
||||
set (H5_HAVE_SZLIB_H 1) |
||||
set (H5_HAVE_LIBSZ 1) |
||||
message (VERBOSE "SZIP is built from fetch content") |
||||
message (VERBOSE "... with library AEC") |
||||
set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${SZIP_STATIC_LIBRARY}) |
||||
elseif (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
EXTERNAL_SZIP_LIBRARY (${HDF5_ALLOW_EXTERNAL_SUPPORT} ${HDF5_ENABLE_SZIP_ENCODING}) |
||||
set (H5_HAVE_FILTER_SZIP 1) |
||||
set (H5_HAVE_SZLIB_H 1) |
||||
set (H5_HAVE_LIBSZ 1) |
||||
message (VERBOSE "Filter SZIP is built") |
||||
message (VERBOSE "... with library AEC") |
||||
set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${SZIP_STATIC_LIBRARY}) |
||||
else () |
||||
message (FATAL_ERROR "SZIP is Required for SZIP support in HDF5") |
||||
endif () |
||||
endif () |
||||
INCLUDE_DIRECTORIES (${SZIP_INCLUDE_DIRS}) |
||||
message (VERBOSE "Filter SZIP is ON") |
||||
if (H5_HAVE_FILTER_SZIP) |
||||
set (EXTERNAL_FILTERS "${EXTERNAL_FILTERS} DECODE") |
||||
endif () |
||||
if (HDF5_ENABLE_SZIP_ENCODING) |
||||
set (H5_HAVE_SZIP_ENCODER 1) |
||||
set (EXTERNAL_FILTERS "${EXTERNAL_FILTERS} ENCODE") |
||||
endif () |
||||
endif () |
||||
@ -0,0 +1,670 @@ |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
include (CMakePackageConfigHelpers) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Check for Installation Utilities |
||||
#----------------------------------------------------------------------------- |
||||
if (WIN32) |
||||
set (PF_ENV_EXT "(x86)") |
||||
find_program (NSIS_EXECUTABLE NSIS.exe PATHS "$ENV{ProgramFiles}\\NSIS" "$ENV{ProgramFiles${PF_ENV_EXT}}\\NSIS") |
||||
if(NOT CPACK_WIX_ROOT) |
||||
file(TO_CMAKE_PATH "$ENV{WIX}" CPACK_WIX_ROOT) |
||||
endif () |
||||
find_program (WIX_EXECUTABLE candle PATHS "${CPACK_WIX_ROOT}/bin") |
||||
endif () |
||||
|
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Add Target(s) to CMake Install for import into other projects |
||||
#----------------------------------------------------------------------------- |
||||
if (NOT HDF5_EXTERNALLY_CONFIGURED) |
||||
if (HDF5_EXPORTED_TARGETS) |
||||
install ( |
||||
EXPORT ${HDF5_EXPORTED_TARGETS} |
||||
DESTINATION ${HDF5_INSTALL_CMAKE_DIR} |
||||
FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake |
||||
NAMESPACE ${HDF_PACKAGE_NAMESPACE} |
||||
COMPONENT configinstall |
||||
) |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Export all exported targets to the build tree for use by parent project |
||||
#----------------------------------------------------------------------------- |
||||
export ( |
||||
TARGETS ${HDF5_LIBRARIES_TO_EXPORT} ${HDF5_LIB_DEPENDENCIES} ${HDF5_UTILS_TO_EXPORT} |
||||
FILE ${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-targets.cmake |
||||
NAMESPACE ${HDF_PACKAGE_NAMESPACE} |
||||
) |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Set includes needed for build |
||||
#----------------------------------------------------------------------------- |
||||
set (HDF5_INCLUDES_BUILD_TIME |
||||
${HDF5_SRC_INCLUDE_DIRS} ${HDF5_CPP_SRC_DIR} ${HDF5_HL_SRC_DIR} |
||||
${HDF5_TOOLS_SRC_DIR} ${HDF5_SRC_BINARY_DIR} |
||||
) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Set variables needed for installation |
||||
#----------------------------------------------------------------------------- |
||||
set (HDF5_VERSION_STRING ${HDF5_PACKAGE_VERSION}) |
||||
set (HDF5_VERSION_MAJOR ${HDF5_PACKAGE_VERSION_MAJOR}) |
||||
set (HDF5_VERSION_MINOR ${HDF5_PACKAGE_VERSION_MINOR}) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the hdf5-config.cmake file for the build directory |
||||
#----------------------------------------------------------------------------- |
||||
set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR}) |
||||
set (SHARE_INSTALL_DIR "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_INSTALL_CMAKE_DIR}" ) |
||||
set (CURRENT_BUILD_DIR "${CMAKE_CURRENT_BINARY_DIR}" ) |
||||
configure_package_config_file ( |
||||
${HDF_RESOURCES_DIR}/hdf5-config.cmake.in |
||||
"${HDF5_BINARY_DIR}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake" |
||||
INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}" |
||||
PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR |
||||
INSTALL_PREFIX "${CMAKE_CURRENT_BINARY_DIR}" |
||||
) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the hdf5-config.cmake file for the install directory |
||||
#----------------------------------------------------------------------------- |
||||
set (INCLUDE_INSTALL_DIR ${HDF5_INSTALL_INCLUDE_DIR}) |
||||
set (SHARE_INSTALL_DIR "${CMAKE_INSTALL_PREFIX}/${HDF5_INSTALL_CMAKE_DIR}" ) |
||||
set (CURRENT_BUILD_DIR "${CMAKE_INSTALL_PREFIX}" ) |
||||
configure_package_config_file ( |
||||
${HDF_RESOURCES_DIR}/hdf5-config.cmake.in |
||||
"${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake" |
||||
INSTALL_DESTINATION "${HDF5_INSTALL_CMAKE_DIR}" |
||||
PATH_VARS INCLUDE_INSTALL_DIR SHARE_INSTALL_DIR CURRENT_BUILD_DIR |
||||
) |
||||
|
||||
if (NOT HDF5_EXTERNALLY_CONFIGURED) |
||||
install ( |
||||
FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config.cmake |
||||
DESTINATION ${HDF5_INSTALL_CMAKE_DIR} |
||||
COMPONENT configinstall |
||||
) |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the hdf5-config-version .cmake file for the install directory |
||||
#----------------------------------------------------------------------------- |
||||
if (NOT HDF5_EXTERNALLY_CONFIGURED) |
||||
write_basic_package_version_file ( |
||||
"${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake" |
||||
VERSION ${HDF5_PACKAGE_VERSION} |
||||
COMPATIBILITY SameMinorVersion |
||||
) |
||||
#configure_file ( |
||||
# ${HDF_RESOURCES_DIR}/hdf5-config-version.cmake.in |
||||
# ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake @ONLY |
||||
#) |
||||
install ( |
||||
FILES ${HDF5_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/${HDF5_PACKAGE}${HDF_PACKAGE_EXT}-config-version.cmake |
||||
DESTINATION ${HDF5_INSTALL_CMAKE_DIR} |
||||
COMPONENT configinstall |
||||
) |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the libhdf5.settings file for the lib info |
||||
#----------------------------------------------------------------------------- |
||||
if (H5_WORDS_BIGENDIAN) |
||||
set (BYTESEX big-endian) |
||||
else () |
||||
set (BYTESEX little-endian) |
||||
endif () |
||||
configure_file ( |
||||
${HDF_RESOURCES_DIR}/libhdf5.settings.cmake.in |
||||
${HDF5_SRC_BINARY_DIR}/libhdf5.settings ESCAPE_QUOTES @ONLY |
||||
) |
||||
install ( |
||||
FILES ${HDF5_SRC_BINARY_DIR}/libhdf5.settings |
||||
DESTINATION ${HDF5_INSTALL_LIB_DIR} |
||||
COMPONENT libraries |
||||
) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the HDF5_Examples.cmake file and the examples |
||||
#----------------------------------------------------------------------------- |
||||
option (HDF5_PACK_EXAMPLES "Package the HDF5 Library Examples Compressed File" OFF) |
||||
if (HDF5_PACK_EXAMPLES) |
||||
configure_file ( |
||||
${HDF_RESOURCES_DIR}/examples/HDF5_Examples.cmake.in |
||||
${HDF5_BINARY_DIR}/HDF5_Examples.cmake @ONLY |
||||
) |
||||
install ( |
||||
FILES ${HDF5_BINARY_DIR}/HDF5_Examples.cmake |
||||
DESTINATION ${HDF5_INSTALL_DATA_DIR} |
||||
COMPONENT hdfdocuments |
||||
) |
||||
|
||||
option (EXAMPLES_USE_RELEASE_NAME "Use the released examples artifact name" OFF) |
||||
option (EXAMPLES_DOWNLOAD "Download to use released examples files" OFF) |
||||
if (EXAMPLES_DOWNLOAD) |
||||
if (NOT EXAMPLES_USE_LOCALCONTENT) |
||||
set (EXAMPLES_URL ${EXAMPLES_TGZ_ORIGPATH}/${EXAMPLES_TGZ_ORIGNAME}) |
||||
else () |
||||
set (EXAMPLES_URL ${TGZPATH}/${EXAMPLES_TGZ_ORIGNAME}) |
||||
endif () |
||||
message (VERBOSE "Examples file is ${EXAMPLES_URL}") |
||||
file (DOWNLOAD ${EXAMPLES_URL} ${HDF5_BINARY_DIR}/${HDF5_EXAMPLES_COMPRESSED}) |
||||
if (EXISTS "${HDF5_BINARY_DIR}/${HDF5_EXAMPLES_COMPRESSED}") |
||||
execute_process( |
||||
COMMAND ${CMAKE_COMMAND} -E tar xzf ${HDF5_EXAMPLES_COMPRESSED} |
||||
WORKING_DIRECTORY ${HDF5_BINARY_DIR} |
||||
COMMAND_ECHO STDOUT |
||||
) |
||||
endif () |
||||
set (EXAMPLES_USE_RELEASE_NAME ON CACHE BOOL "" FORCE) |
||||
else () |
||||
if (EXISTS "${HDF5_EXAMPLES_COMPRESSED_DIR}/${HDF5_EXAMPLES_COMPRESSED}") |
||||
execute_process( |
||||
COMMAND ${CMAKE_COMMAND} -E tar xzf ${HDF5_EXAMPLES_COMPRESSED_DIR}/${HDF5_EXAMPLES_COMPRESSED} |
||||
WORKING_DIRECTORY ${HDF5_BINARY_DIR} |
||||
COMMAND_ECHO STDOUT |
||||
) |
||||
endif () |
||||
endif () |
||||
if (EXAMPLES_USE_RELEASE_NAME) |
||||
get_filename_component (EX_LAST_EXT ${HDF5_EXAMPLES_COMPRESSED} LAST_EXT) |
||||
if (${EX_LAST_EXT} STREQUAL ".zip") |
||||
get_filename_component (EX_DIR_NAME ${HDF5_EXAMPLES_COMPRESSED} NAME_WLE) |
||||
else () |
||||
get_filename_component (EX_DIR_NAME ${HDF5_EXAMPLES_COMPRESSED} NAME_WLE) |
||||
get_filename_component (EX_DIR_NAME ${EX_DIR_NAME} NAME_WLE) |
||||
endif () |
||||
execute_process( |
||||
COMMAND ${CMAKE_COMMAND} -E rename ${EX_DIR_NAME} HDF5Examples |
||||
WORKING_DIRECTORY ${HDF5_BINARY_DIR} |
||||
COMMAND_ECHO STDOUT |
||||
) |
||||
endif () |
||||
install ( |
||||
DIRECTORY ${HDF5_BINARY_DIR}/HDF5Examples |
||||
DESTINATION ${HDF5_INSTALL_DATA_DIR} |
||||
USE_SOURCE_PERMISSIONS |
||||
COMPONENT hdfdocuments |
||||
) |
||||
install ( |
||||
FILES |
||||
${HDF5_SOURCE_DIR}/release_docs/USING_CMake_Examples.txt |
||||
DESTINATION ${HDF5_INSTALL_DATA_DIR} |
||||
COMPONENT hdfdocuments |
||||
) |
||||
install ( |
||||
FILES |
||||
${HDF_RESOURCES_DIR}/examples/CTestScript.cmake |
||||
DESTINATION ${HDF5_INSTALL_DATA_DIR} |
||||
COMPONENT hdfdocuments |
||||
) |
||||
install ( |
||||
FILES |
||||
${HDF_RESOURCES_DIR}/examples/HDF5_Examples_options.cmake |
||||
DESTINATION ${HDF5_INSTALL_DATA_DIR} |
||||
COMPONENT hdfdocuments |
||||
) |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the README.md file for the binary package |
||||
#----------------------------------------------------------------------------- |
||||
HDF_README_PROPERTIES(HDF5_BUILD_FORTRAN) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the COPYING.txt file for the windows binary package |
||||
#----------------------------------------------------------------------------- |
||||
if (WIN32) |
||||
configure_file (${HDF5_SOURCE_DIR}/COPYING ${HDF5_BINARY_DIR}/COPYING.txt @ONLY) |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Add Document File(s) to CMake Install |
||||
#----------------------------------------------------------------------------- |
||||
if (NOT HDF5_EXTERNALLY_CONFIGURED) |
||||
install ( |
||||
FILES ${HDF5_SOURCE_DIR}/COPYING |
||||
DESTINATION ${HDF5_INSTALL_DATA_DIR} |
||||
COMPONENT hdfdocuments |
||||
) |
||||
if (EXISTS "${HDF5_SOURCE_DIR}/release_docs" AND IS_DIRECTORY "${HDF5_SOURCE_DIR}/release_docs") |
||||
set (release_files |
||||
${HDF5_SOURCE_DIR}/release_docs/USING_HDF5_CMake.txt |
||||
${HDF5_SOURCE_DIR}/release_docs/RELEASE.txt |
||||
) |
||||
if (WIN32) |
||||
set (release_files |
||||
${release_files} |
||||
${HDF5_SOURCE_DIR}/release_docs/USING_HDF5_VS.txt |
||||
) |
||||
endif () |
||||
if (HDF5_PACK_INSTALL_DOCS) |
||||
set (release_files |
||||
${release_files} |
||||
${HDF5_SOURCE_DIR}/release_docs/INSTALL_Warnings.txt |
||||
${HDF5_SOURCE_DIR}/release_docs/INSTALL_CMake.txt |
||||
${HDF5_SOURCE_DIR}/release_docs/HISTORY-1_8.txt |
||||
${HDF5_SOURCE_DIR}/release_docs/INSTALL |
||||
) |
||||
if (WIN32) |
||||
set (release_files |
||||
${release_files} |
||||
${HDF5_SOURCE_DIR}/release_docs/INSTALL_Windows.txt |
||||
) |
||||
endif () |
||||
if (CYGWIN) |
||||
set (release_files |
||||
${release_files} |
||||
${HDF5_SOURCE_DIR}/release_docs/INSTALL_Cygwin.txt |
||||
) |
||||
endif () |
||||
if (HDF5_ENABLE_PARALLEL) |
||||
set (release_files |
||||
${release_files} |
||||
${HDF5_SOURCE_DIR}/release_docs/INSTALL_parallel |
||||
) |
||||
endif () |
||||
endif () |
||||
install ( |
||||
FILES ${release_files} |
||||
DESTINATION ${HDF5_INSTALL_DOC_DIR} |
||||
COMPONENT hdfdocuments |
||||
) |
||||
endif () |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Set the cpack variables |
||||
#----------------------------------------------------------------------------- |
||||
if (NOT HDF5_EXTERNALLY_CONFIGURED AND NOT HDF5_NO_PACKAGES) |
||||
set (CPACK_PACKAGE_VENDOR "HDF_Group") |
||||
set (CPACK_PACKAGE_NAME "${HDF5_PACKAGE_NAME}") |
||||
if (CDASH_LOCAL) |
||||
set (CPACK_PACKAGE_VERSION "${HDF5_PACKAGE_VERSION}") |
||||
else () |
||||
set (CPACK_PACKAGE_VERSION "${HDF5_PACKAGE_VERSION_STRING}") |
||||
endif () |
||||
set (CPACK_PACKAGE_VERSION_MAJOR "${HDF5_PACKAGE_VERSION_MAJOR}") |
||||
set (CPACK_PACKAGE_VERSION_MINOR "${HDF5_PACKAGE_VERSION_MINOR}") |
||||
set (CPACK_PACKAGE_VERSION_PATCH "") |
||||
set (CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/COPYING") |
||||
if (EXISTS "${HDF5_SOURCE_DIR}/release_docs") |
||||
set (CPACK_PACKAGE_DESCRIPTION_FILE "${CMAKE_CURRENT_SOURCE_DIR}/release_docs/RELEASE.txt") |
||||
set (CPACK_RESOURCE_FILE_README "${CMAKE_CURRENT_SOURCE_DIR}/release_docs/RELEASE.txt") |
||||
endif () |
||||
set (CPACK_PACKAGE_RELOCATABLE TRUE) |
||||
if (OVERRIDE_INSTALL_VERSION) |
||||
set (CPACK_PACKAGE_INSTALL_DIRECTORY "${CPACK_PACKAGE_VENDOR}/${CPACK_PACKAGE_NAME}/${OVERRIDE_INSTALL_VERSION}") |
||||
else () |
||||
set (CPACK_PACKAGE_INSTALL_DIRECTORY "${CPACK_PACKAGE_VENDOR}/${CPACK_PACKAGE_NAME}/${CPACK_PACKAGE_VERSION}") |
||||
endif () |
||||
set (CPACK_PACKAGE_ICON "${HDF_RESOURCES_DIR}/hdf.bmp") |
||||
|
||||
set (CPACK_GENERATOR "TGZ") |
||||
if (WIN32) |
||||
set (CPACK_GENERATOR "ZIP") |
||||
|
||||
if (NSIS_EXECUTABLE) |
||||
list (APPEND CPACK_GENERATOR "NSIS") |
||||
endif () |
||||
# Installers for 32- vs. 64-bit CMake: |
||||
# - Root install directory (displayed to end user at installer-run time) |
||||
# - "NSIS package/display name" (text used in the installer GUI) |
||||
# - Registry key used to store info about the installation |
||||
set (CPACK_NSIS_PACKAGE_NAME "${HDF5_PACKAGE_STRING}") |
||||
if (CMAKE_CL_64) |
||||
set (CPACK_NSIS_INSTALL_ROOT "$PROGRAMFILES64") |
||||
set (CPACK_PACKAGE_INSTALL_REGISTRY_KEY "${CPACK_PACKAGE_NAME}-${CPACK_PACKAGE_VERSION} (Win64)") |
||||
else () |
||||
set (CPACK_NSIS_INSTALL_ROOT "$PROGRAMFILES") |
||||
set (CPACK_PACKAGE_INSTALL_REGISTRY_KEY "${CPACK_PACKAGE_NAME}-${CPACK_PACKAGE_VERSION}") |
||||
endif () |
||||
# set the install/unistall icon used for the installer itself |
||||
# There is a bug in NSI that does not handle full unix paths properly. |
||||
set (CPACK_NSIS_MUI_ICON "${HDF_RESOURCES_DIR}\\\\hdf.ico") |
||||
set (CPACK_NSIS_MUI_UNIICON "${HDF_RESOURCES_DIR}\\\\hdf.ico") |
||||
# set the package header icon for MUI |
||||
set (CPACK_PACKAGE_ICON "${HDF_RESOURCES_DIR}\\\\hdf.bmp") |
||||
set (CPACK_NSIS_DISPLAY_NAME "${CPACK_NSIS_PACKAGE_NAME}") |
||||
if (OVERRIDE_INSTALL_VERSION) |
||||
set (CPACK_PACKAGE_INSTALL_DIRECTORY "${CPACK_PACKAGE_VENDOR}\\\\${CPACK_PACKAGE_NAME}\\\\${OVERRIDE_INSTALL_VERSION}") |
||||
else () |
||||
set (CPACK_PACKAGE_INSTALL_DIRECTORY "${CPACK_PACKAGE_VENDOR}\\\\${CPACK_PACKAGE_NAME}\\\\${CPACK_PACKAGE_VERSION}") |
||||
endif () |
||||
set (CPACK_NSIS_CONTACT "${HDF5_PACKAGE_BUGREPORT}") |
||||
set (CPACK_NSIS_MODIFY_PATH ON) |
||||
|
||||
if (WIX_EXECUTABLE) |
||||
list (APPEND CPACK_GENERATOR "WIX") |
||||
endif () |
||||
#WiX variables |
||||
set (CPACK_WIX_UNINSTALL "1") |
||||
# .. variable:: CPACK_WIX_LICENSE_RTF |
||||
# RTF License File |
||||
# |
||||
# If CPACK_RESOURCE_FILE_LICENSE has an .rtf extension it is used as-is. |
||||
# |
||||
# If CPACK_RESOURCE_FILE_LICENSE has an .txt extension it is implicitly |
||||
# converted to RTF by the WiX Generator. |
||||
# The expected encoding of the .txt file is UTF-8. |
||||
# |
||||
# With CPACK_WIX_LICENSE_RTF you can override the license file used by the |
||||
# WiX Generator in case CPACK_RESOURCE_FILE_LICENSE is in an unsupported |
||||
# format or the .txt -> .rtf conversion does not work as expected. |
||||
set (CPACK_RESOURCE_FILE_LICENSE "${HDF5_BINARY_DIR}/COPYING.txt") |
||||
# .. variable:: CPACK_WIX_PRODUCT_ICON |
||||
# The Icon shown next to the program name in Add/Remove programs. |
||||
set(CPACK_WIX_PRODUCT_ICON "${HDF_RESOURCES_DIR}\\\\hdf.ico") |
||||
# |
||||
# .. variable:: CPACK_WIX_UI_BANNER |
||||
# |
||||
# The bitmap will appear at the top of all installer pages other than the |
||||
# welcome and completion dialogs. |
||||
# |
||||
# If set, this image will replace the default banner image. |
||||
# |
||||
# This image must be 493 by 58 pixels. |
||||
# |
||||
# .. variable:: CPACK_WIX_UI_DIALOG |
||||
# |
||||
# Background bitmap used on the welcome and completion dialogs. |
||||
# |
||||
# If this variable is set, the installer will replace the default dialog |
||||
# image. |
||||
# |
||||
# This image must be 493 by 312 pixels. |
||||
# |
||||
set(CPACK_WIX_PROPERTY_ARPCOMMENTS "HDF5 (Hierarchical Data Format 5) Software Library and Utilities") |
||||
set(CPACK_WIX_PROPERTY_ARPURLINFOABOUT "${HDF5_PACKAGE_URL}") |
||||
set(CPACK_WIX_PROPERTY_ARPHELPLINK "${HDF5_PACKAGE_BUGREPORT}") |
||||
if (BUILD_SHARED_LIBS) |
||||
set(CPACK_WIX_PATCH_FILE "${HDF_RESOURCES_DIR}/patch.xml") |
||||
endif () |
||||
elseif (APPLE) |
||||
list (APPEND CPACK_GENERATOR "STGZ") |
||||
list (APPEND CPACK_GENERATOR "DragNDrop") |
||||
set (CPACK_COMPONENTS_ALL_IN_ONE_PACKAGE ON) |
||||
set (CPACK_PACKAGING_INSTALL_PREFIX "/${CPACK_PACKAGE_INSTALL_DIRECTORY}") |
||||
set (CPACK_PACKAGE_ICON "${HDF_RESOURCES_DIR}/hdf.icns") |
||||
|
||||
option (HDF5_PACK_MACOSX_FRAMEWORK "Package the HDF5 Library in a Frameworks" OFF) |
||||
if (HDF5_PACK_MACOSX_FRAMEWORK AND HDF5_BUILD_FRAMEWORKS) |
||||
set (CPACK_BUNDLE_NAME "${HDF5_PACKAGE_STRING}") |
||||
set (CPACK_BUNDLE_LOCATION "/") # make sure CMAKE_INSTALL_PREFIX ends in / |
||||
set (CMAKE_INSTALL_PREFIX "/${CPACK_BUNDLE_NAME}.framework/Versions/${CPACK_PACKAGE_VERSION}/${CPACK_PACKAGE_NAME}/") |
||||
set (CPACK_BUNDLE_ICON "${HDF_RESOURCES_DIR}/hdf.icns") |
||||
set (CPACK_BUNDLE_PLIST "${HDF5_BINARY_DIR}/CMakeFiles/Info.plist") |
||||
set (CPACK_SHORT_VERSION_STRING "${CPACK_PACKAGE_VERSION}") |
||||
#----------------------------------------------------------------------------- |
||||
# Configure the Info.plist file for the install bundle |
||||
#----------------------------------------------------------------------------- |
||||
configure_file ( |
||||
${HDF_RESOURCES_DIR}/CPack.Info.plist.in |
||||
${HDF5_BINARY_DIR}/CMakeFiles/Info.plist @ONLY |
||||
) |
||||
configure_file ( |
||||
${HDF_RESOURCES_DIR}/PkgInfo.in |
||||
${HDF5_BINARY_DIR}/CMakeFiles/PkgInfo @ONLY |
||||
) |
||||
configure_file ( |
||||
${HDF_RESOURCES_DIR}/version.plist.in |
||||
${HDF5_BINARY_DIR}/CMakeFiles/version.plist @ONLY |
||||
) |
||||
install ( |
||||
FILES ${HDF5_BINARY_DIR}/CMakeFiles/PkgInfo |
||||
DESTINATION .. |
||||
) |
||||
endif () |
||||
else () |
||||
list (APPEND CPACK_GENERATOR "STGZ") |
||||
set (CPACK_PACKAGING_INSTALL_PREFIX "/${CPACK_PACKAGE_INSTALL_DIRECTORY}") |
||||
set (CPACK_COMPONENTS_ALL_IN_ONE_PACKAGE ON) |
||||
|
||||
find_program (DPKGSHLIB_EXE dpkg-shlibdeps) |
||||
if (DPKGSHLIB_EXE) |
||||
list (APPEND CPACK_GENERATOR "DEB") |
||||
set (CPACK_DEBIAN_PACKAGE_SECTION "Libraries") |
||||
set (CPACK_DEBIAN_PACKAGE_MAINTAINER "${HDF5_PACKAGE_BUGREPORT}") |
||||
endif () |
||||
|
||||
find_program (RPMBUILD_EXE rpmbuild) |
||||
if (RPMBUILD_EXE) |
||||
list (APPEND CPACK_GENERATOR "RPM") |
||||
set (CPACK_RPM_PACKAGE_RELEASE "1") |
||||
set (CPACK_RPM_PACKAGE_RELEASE_DIST ON) |
||||
set (CPACK_RPM_COMPONENT_INSTALL ON) |
||||
set (CPACK_RPM_PACKAGE_RELOCATABLE ON) |
||||
set (CPACK_RPM_FILE_NAME "RPM-DEFAULT") |
||||
set (CPACK_RPM_PACKAGE_NAME "${CPACK_PACKAGE_NAME}") |
||||
set (CPACK_RPM_PACKAGE_VERSION "${CPACK_PACKAGE_VERSION}") |
||||
set (CPACK_RPM_PACKAGE_VENDOR "${CPACK_PACKAGE_VENDOR}") |
||||
set (CPACK_RPM_PACKAGE_LICENSE "BSD-style") |
||||
set (CPACK_RPM_PACKAGE_GROUP "Development/Libraries") |
||||
set (CPACK_RPM_PACKAGE_URL "${HDF5_PACKAGE_URL}") |
||||
set (CPACK_RPM_PACKAGE_SUMMARY "HDF5 is a unique technology suite that makes possible the management of extremely large and complex data collections.") |
||||
set (CPACK_RPM_PACKAGE_DESCRIPTION |
||||
"The HDF5 technology suite includes: |
||||
|
||||
* A versatile data model that can represent very complex data objects and a wide variety of metadata. |
||||
|
||||
* A completely portable file format with no limit on the number or size of data objects in the collection. |
||||
|
||||
* A software library that runs on a range of computational platforms, from laptops to massively parallel systems, and implements a high-level API with C, C++, Fortran 90, and Java interfaces. |
||||
|
||||
* A rich set of integrated performance features that allow for access time and storage space optimizations. |
||||
|
||||
* Tools and applications for managing, manipulating, viewing, and analyzing the data in the collection. |
||||
|
||||
The HDF5 data model, file format, API, library, and tools are open and distributed without charge. |
||||
" |
||||
) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Configure the spec file for the install RPM |
||||
#----------------------------------------------------------------------------- |
||||
# configure_file ("${HDF5_RESOURCES_DIR}/hdf5.spec.in" "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_PACKAGE_NAME}.spec" @ONLY IMMEDIATE) |
||||
# set (CPACK_RPM_USER_BINARY_SPECFILE "${CMAKE_CURRENT_BINARY_DIR}/${HDF5_PACKAGE_NAME}.spec") |
||||
endif () |
||||
endif () |
||||
|
||||
# By default, do not warn when built on machines using only VS Express: |
||||
if (NOT DEFINED CMAKE_INSTALL_SYSTEM_RUNTIME_LIBS_NO_WARNINGS) |
||||
set (CMAKE_INSTALL_SYSTEM_RUNTIME_LIBS_NO_WARNINGS ON) |
||||
endif () |
||||
include (InstallRequiredSystemLibraries) |
||||
|
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${HDF5_BINARY_DIR};HDF5;ALL;/") |
||||
|
||||
if (HDF5_PACKAGE_EXTLIBS) |
||||
if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
if (ZLIB_FOUND AND ZLIB_USE_EXTERNAL) |
||||
if (WIN32) |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${ZLIB_INCLUDE_DIR_GEN};HDF5_ZLIB;ALL;/") |
||||
else () |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${ZLIB_INCLUDE_DIR_GEN};HDF5_ZLIB;libraries;/") |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${ZLIB_INCLUDE_DIR_GEN};HDF5_ZLIB;headers;/") |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${ZLIB_INCLUDE_DIR_GEN};HDF5_ZLIB;configinstall;/") |
||||
endif () |
||||
endif () |
||||
if (SZIP_FOUND AND SZIP_USE_EXTERNAL) |
||||
if (WIN32) |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${SZIP_INCLUDE_DIR_GEN};SZIP;ALL;/") |
||||
else () |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${SZIP_INCLUDE_DIR_GEN};SZIP;libraries;/") |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${SZIP_INCLUDE_DIR_GEN};SZIP;headers;/") |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${SZIP_INCLUDE_DIR_GEN};SZIP;configinstall;/") |
||||
endif () |
||||
endif () |
||||
if (PLUGIN_FOUND AND PLUGIN_USE_EXTERNAL) |
||||
if (WIN32) |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${PLUGIN_BINARY_DIR};PLUGIN;ALL;/") |
||||
else () |
||||
set (CPACK_INSTALL_CMAKE_PROJECTS "${CPACK_INSTALL_CMAKE_PROJECTS};${PLUGIN_BINARY_DIR};PLUGIN;libraries;/") |
||||
endif () |
||||
endif () |
||||
endif () |
||||
endif () |
||||
|
||||
include (CPack) |
||||
|
||||
cpack_add_install_type(Full DISPLAY_NAME "Everything") |
||||
cpack_add_install_type(Developer) |
||||
|
||||
cpack_add_component_group(Runtime) |
||||
|
||||
cpack_add_component_group(Documents |
||||
EXPANDED |
||||
DESCRIPTION "Release notes for developing HDF5 applications" |
||||
) |
||||
|
||||
cpack_add_component_group(Development |
||||
EXPANDED |
||||
DESCRIPTION "All of the tools you'll need to develop HDF5 applications" |
||||
) |
||||
|
||||
cpack_add_component_group(Applications |
||||
EXPANDED |
||||
DESCRIPTION "Tools for HDF5 files" |
||||
) |
||||
|
||||
#--------------------------------------------------------------------------- |
||||
# Now list the cpack commands |
||||
#--------------------------------------------------------------------------- |
||||
cpack_add_component (libraries |
||||
DISPLAY_NAME "HDF5 Libraries" |
||||
GROUP Runtime |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
cpack_add_component (headers |
||||
DISPLAY_NAME "HDF5 Headers" |
||||
DEPENDS libraries |
||||
GROUP Development |
||||
INSTALL_TYPES Full Developer |
||||
) |
||||
cpack_add_component (hdfdocuments |
||||
DISPLAY_NAME "HDF5 Documents" |
||||
GROUP Documents |
||||
INSTALL_TYPES Full Developer |
||||
) |
||||
cpack_add_component (configinstall |
||||
DISPLAY_NAME "HDF5 CMake files" |
||||
HIDDEN |
||||
DEPENDS libraries |
||||
GROUP Development |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
|
||||
if (HDF5_BUILD_FORTRAN) |
||||
cpack_add_component (fortlibraries |
||||
DISPLAY_NAME "HDF5 Fortran Libraries" |
||||
DEPENDS libraries |
||||
GROUP Runtime |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
cpack_add_component (fortheaders |
||||
DISPLAY_NAME "HDF5 Fortran Headers" |
||||
DEPENDS fortlibraries |
||||
GROUP Development |
||||
INSTALL_TYPES Full Developer |
||||
) |
||||
endif () |
||||
|
||||
if (HDF5_BUILD_CPP_LIB) |
||||
cpack_add_component (cpplibraries |
||||
DISPLAY_NAME "HDF5 C++ Libraries" |
||||
DEPENDS libraries |
||||
GROUP Runtime |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
cpack_add_component (cppheaders |
||||
DISPLAY_NAME "HDF5 C++ Headers" |
||||
DEPENDS cpplibraries |
||||
GROUP Development |
||||
INSTALL_TYPES Full Developer |
||||
) |
||||
endif () |
||||
|
||||
cpack_add_component (utilsapplications |
||||
DISPLAY_NAME "HDF5 Utility Applications" |
||||
DEPENDS libraries |
||||
GROUP Applications |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
|
||||
if (HDF5_BUILD_TOOLS) |
||||
cpack_add_component (toolsapplications |
||||
DISPLAY_NAME "HDF5 Tools Applications" |
||||
DEPENDS toolslibraries |
||||
GROUP Applications |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
cpack_add_component (toolslibraries |
||||
DISPLAY_NAME "HDF5 Tools Libraries" |
||||
DEPENDS libraries |
||||
GROUP Runtime |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
cpack_add_component (toolsheaders |
||||
DISPLAY_NAME "HDF5 Tools Headers" |
||||
DEPENDS toolslibraries |
||||
GROUP Development |
||||
INSTALL_TYPES Full Developer |
||||
) |
||||
endif () |
||||
|
||||
if (HDF5_BUILD_HL_LIB) |
||||
cpack_add_component (hllibraries |
||||
DISPLAY_NAME "HDF5 HL Libraries" |
||||
DEPENDS libraries |
||||
GROUP Runtime |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
cpack_add_component (hlheaders |
||||
DISPLAY_NAME "HDF5 HL Headers" |
||||
DEPENDS hllibraries |
||||
GROUP Development |
||||
INSTALL_TYPES Full Developer |
||||
) |
||||
cpack_add_component (hltoolsapplications |
||||
DISPLAY_NAME "HDF5 HL Tools Applications" |
||||
DEPENDS hllibraries |
||||
GROUP Applications |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
if (HDF5_BUILD_CPP_LIB) |
||||
cpack_add_component (hlcpplibraries |
||||
DISPLAY_NAME "HDF5 HL C++ Libraries" |
||||
DEPENDS hllibraries |
||||
GROUP Runtime |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
cpack_add_component (hlcppheaders |
||||
DISPLAY_NAME "HDF5 HL C++ Headers" |
||||
DEPENDS hlcpplibraries |
||||
GROUP Development |
||||
INSTALL_TYPES Full Developer |
||||
) |
||||
endif () |
||||
if (HDF5_BUILD_FORTRAN) |
||||
cpack_add_component (hlfortlibraries |
||||
DISPLAY_NAME "HDF5 HL Fortran Libraries" |
||||
DEPENDS fortlibraries |
||||
GROUP Runtime |
||||
INSTALL_TYPES Full Developer User |
||||
) |
||||
endif () |
||||
endif () |
||||
|
||||
endif () |
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,56 @@ |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
include (ExternalProject) |
||||
#option (HDF5_ALLOW_EXTERNAL_SUPPORT "Allow External Library Building (NO GIT TGZ)" "NO") |
||||
set (HDF5_ALLOW_EXTERNAL_SUPPORT "NO" CACHE STRING "Allow External Library Building (NO GIT TGZ)") |
||||
set_property (CACHE HDF5_ALLOW_EXTERNAL_SUPPORT PROPERTY STRINGS NO GIT TGZ) |
||||
if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
option (PLUGIN_USE_EXTERNAL "Use External Library Building for filter PLUGIN" 1) |
||||
if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT") |
||||
set (PLUGIN_URL ${PLUGIN_GIT_URL} CACHE STRING "Path to PLUGIN git repository") |
||||
set (PLUGIN_BRANCH ${PLUGIN_GIT_BRANCH}) |
||||
elseif (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
if (NOT TGZPATH) |
||||
set (TGZPATH ${HDF5_SOURCE_DIR}) |
||||
endif () |
||||
set (PLUGIN_URL ${TGZPATH}/${PLUGIN_TGZ_NAME}) |
||||
if (NOT EXISTS "${PLUGIN_URL}") |
||||
set (HDF5_ENABLE_PLUGIN_SUPPORT OFF CACHE BOOL "" FORCE) |
||||
message (STATUS "Filter PLUGIN file ${PLUGIN_URL} not found") |
||||
endif () |
||||
else () |
||||
set (PLUGIN_USE_EXTERNAL 0) |
||||
endif () |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Option for PLUGIN support |
||||
#----------------------------------------------------------------------------- |
||||
option (HDF5_ENABLE_PLUGIN_SUPPORT "Enable PLUGIN Filters" OFF) |
||||
if (HDF5_ENABLE_PLUGIN_SUPPORT) |
||||
if (NOT PLUGIN_USE_EXTERNAL) |
||||
find_package (PLUGIN NAMES ${PLUGIN_PACKAGE_NAME}${HDF_PACKAGE_EXT}) |
||||
if (NOT PLUGIN_FOUND) |
||||
find_package (PLUGIN) # Legacy find |
||||
endif () |
||||
endif () |
||||
if (NOT PLUGIN_FOUND) |
||||
if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") |
||||
EXTERNAL_PLUGIN_LIBRARY (${HDF5_ALLOW_EXTERNAL_SUPPORT}) |
||||
message (STATUS "Filter PLUGIN is built") |
||||
else () |
||||
message (FATAL_ERROR " PLUGIN is Required for PLUGIN support in HDF5") |
||||
endif () |
||||
endif () |
||||
message (STATUS "Filter PLUGIN is ON") |
||||
endif () |
||||
@ -0,0 +1,253 @@ |
||||
{ |
||||
"version": 6, |
||||
"include": [ |
||||
"config/cmake-presets/hidden-presets.json" |
||||
], |
||||
"configurePresets": [ |
||||
{ |
||||
"name": "ci-base-tgz", |
||||
"hidden": true, |
||||
"inherits": "ci-base", |
||||
"cacheVariables": { |
||||
"HDF5_ALLOW_EXTERNAL_SUPPORT": "NO", |
||||
"TGZPATH": {"type": "STRING", "value": "${sourceParentDir}/temp"} |
||||
} |
||||
}, |
||||
{ |
||||
"name": "ci-StdCompression", |
||||
"hidden": true, |
||||
"inherits": "ci-base-tgz", |
||||
"cacheVariables": { |
||||
"HDF5_ENABLE_Z_LIB_SUPPORT": "ON", |
||||
"HDF5_ENABLE_SZIP_SUPPORT": "ON", |
||||
"HDF5_ENABLE_SZIP_ENCODING": "ON", |
||||
"BUILD_ZLIB_WITH_FETCHCONTENT": "ON", |
||||
"ZLIB_PACKAGE_NAME": {"type": "STRING", "value": "zlib"}, |
||||
"ZLIB_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/madler/zlib/releases/download/v1.2.13"}, |
||||
"ZLIB_TGZ_ORIGNAME": {"type": "STRING", "value": "zlib-1.2.13.tar.gz"}, |
||||
"ZLIB_USE_LOCALCONTENT": "OFF", |
||||
"BUILD_SZIP_WITH_FETCHCONTENT": "ON", |
||||
"LIBAEC_PACKAGE_NAME": {"type": "STRING", "value": "libaec"}, |
||||
"LIBAEC_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/MathisRosenhauer/libaec/releases/download/v1.0.6"}, |
||||
"LIBAEC_TGZ_ORIGNAME": {"type": "STRING", "value": "libaec-1.0.6.tar.gz"}, |
||||
"LIBAEC_USE_LOCALCONTENT": "OFF" |
||||
} |
||||
}, |
||||
{ |
||||
"name": "ci-base-plugins", |
||||
"hidden": true, |
||||
"inherits": "ci-base-tgz", |
||||
"cacheVariables": { |
||||
"PLUGIN_TGZ_NAME": {"type": "STRING", "value": "hdf5_plugins-1.14.0.tar.gz"}, |
||||
"PLUGIN_PACKAGE_NAME": {"type": "STRING", "value": "pl"}, |
||||
"BSHUF_TGZ_NAME": {"type": "STRING", "value": "bitshuffle.tar.gz"}, |
||||
"BSHUF_PACKAGE_NAME": {"type": "STRING", "value": "bshuf"}, |
||||
"BLOSC_TGZ_NAME": {"type": "STRING", "value": "c-blosc.tar.gz"}, |
||||
"BLOSC_PACKAGE_NAME": {"type": "STRING", "value": "blosc"}, |
||||
"BLOSC_ZLIB_TGZ_NAME": {"type": "STRING", "value": "ZLib.tar.gz"}, |
||||
"BLOSC_ZLIB_PACKAGE_NAME": {"type": "STRING", "value": "zlib"}, |
||||
"BZ2_TGZ_NAME": {"type": "STRING", "value": "BZ2.tar.gz"}, |
||||
"BZ2_PACKAGE_NAME": {"type": "STRING", "value": "bz2"}, |
||||
"FPZIP_TGZ_NAME": {"type": "STRING", "value": "fpzip.tar.gz"}, |
||||
"FPZIP_PACKAGE_NAME": {"type": "STRING", "value": "fpzip"}, |
||||
"JPEG_TGZ_NAME": {"type": "STRING", "value": "JPEG.tar.gz"}, |
||||
"JPEG_PACKAGE_NAME": {"type": "STRING", "value": "jpeg"}, |
||||
"BUILD_LZ4_LIBRARY_SOURCE": "ON", |
||||
"LZ4_TGZ_NAME": {"type": "STRING", "value": "lz4.tar.gz"}, |
||||
"LZ4_PACKAGE_NAME": {"type": "STRING", "value": "lz4"}, |
||||
"LZF_TGZ_NAME": {"type": "STRING", "value": "lzf.tar.gz"}, |
||||
"LZF_PACKAGE_NAME": {"type": "STRING", "value": "lzf"}, |
||||
"SZ_TGZ_NAME": {"type": "STRING", "value": "szf.tar.gz"}, |
||||
"SZ_PACKAGE_NAME": {"type": "STRING", "value": "SZ"}, |
||||
"ZFP_TGZ_NAME": {"type": "STRING", "value": "zfp.tar.gz"}, |
||||
"ZFP_PACKAGE_NAME": {"type": "STRING", "value": "zfp"}, |
||||
"ZSTD_TGZ_NAME": {"type": "STRING", "value": "zstd.tar.gz"}, |
||||
"ZSTD_PACKAGE_NAME": {"type": "STRING", "value": "zstd"} |
||||
} |
||||
}, |
||||
{ |
||||
"name": "ci-StdPlugins", |
||||
"hidden": true, |
||||
"inherits": ["ci-base-plugins", "ci-base-tgz"], |
||||
"cacheVariables": { |
||||
"HDF5_ENABLE_PLUGIN_SUPPORT": "ON", |
||||
"PLUGIN_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/HDFGroup/hdf5_plugins/archive/refs/tags"}, |
||||
"PLUGIN_TGZ_ORIGNAME": {"type": "STRING", "value": "hdf5_plugins-1.14.0.tar.gz"} |
||||
} |
||||
}, |
||||
{ |
||||
"name": "ci-StdExamples", |
||||
"hidden": true, |
||||
"inherits": "ci-base", |
||||
"cacheVariables": { |
||||
"HDF5_PACK_EXAMPLES": "ON", |
||||
"HDF5_EXAMPLES_COMPRESSED": {"type": "STRING", "value": "hdf5-examples-2.0.3.tar.gz"}, |
||||
"HDF5_EXAMPLES_COMPRESSED_DIR": {"type": "STRING", "value": "${sourceParentDir}/temp"}, |
||||
"EXAMPLES_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/HDFGroup/hdf5-examples/archive/refs/tags/"}, |
||||
"EXAMPLES_TGZ_ORIGNAME": {"type": "STRING", "value": "2.0.3.tar.gz"}, |
||||
"EXAMPLES_DOWNLOAD": "ON" |
||||
} |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar", |
||||
"hidden": true, |
||||
"inherits": "ci-StdCompression", |
||||
"cacheVariables": { |
||||
"HDF_PACKAGE_NAMESPACE": {"type": "STRING", "value": "hdf5::"}, |
||||
"HDF5_INSTALL_MOD_FORTRAN": "NO", |
||||
"HDF5_BUILD_GENERATORS": "ON", |
||||
"HDF5_ENABLE_ALL_WARNINGS": "ON", |
||||
"HDF5_MINGW_STATIC_GCC_LIBS": "ON", |
||||
"HDF_TEST_EXPRESS": "2" |
||||
} |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-MSVC", |
||||
"description": "MSVC Standard Config for x64 (Release)", |
||||
"inherits": [ |
||||
"ci-x64-Release-MSVC", |
||||
"ci-CPP", |
||||
"ci-Java", |
||||
"ci-StdShar", |
||||
"ci-StdExamples" |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-MSVC-Fortran", |
||||
"description": "MSVC Standard Config for x64 (Release)", |
||||
"inherits": [ |
||||
"ci-x64-Release-MSVC", |
||||
"ci-CPP", |
||||
"ci-Fortran", |
||||
"ci-Java", |
||||
"ci-StdShar", |
||||
"ci-StdExamples" |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-Clang", |
||||
"description": "Clang Standard Config for x64 (Release)", |
||||
"inherits": [ |
||||
"ci-x64-Release-Clang", |
||||
"ci-CPP", |
||||
"ci-Fortran", |
||||
"ci-Java", |
||||
"ci-StdShar", |
||||
"ci-StdExamples" |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-GNUC", |
||||
"description": "GNUC Standard Config for x64 (Release)", |
||||
"inherits": [ |
||||
"ci-x64-Release-GNUC", |
||||
"ci-CPP", |
||||
"ci-Fortran", |
||||
"ci-Java", |
||||
"ci-StdShar", |
||||
"ci-StdExamples" |
||||
] |
||||
} |
||||
], |
||||
"buildPresets": [ |
||||
{ |
||||
"name": "ci-StdShar-MSVC", |
||||
"description": "MSVC Standard Build for x64 (Release)", |
||||
"configurePreset": "ci-StdShar-MSVC", |
||||
"inherits": [ |
||||
"ci-x64-Release-MSVC" |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-Clang", |
||||
"description": "Clang Standard Build for x64 (Release)", |
||||
"configurePreset": "ci-StdShar-Clang", |
||||
"inherits": [ |
||||
"ci-x64-Release-Clang" |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-GNUC", |
||||
"description": "GNUC Standard Build for x64 (Release)", |
||||
"configurePreset": "ci-StdShar-GNUC", |
||||
"verbose": false, |
||||
"inherits": [ |
||||
"ci-x64-Release-GNUC" |
||||
] |
||||
} |
||||
], |
||||
"testPresets": [ |
||||
{ |
||||
"name": "ci-StdShar-MSVC", |
||||
"configurePreset": "ci-StdShar-MSVC", |
||||
"inherits": [ |
||||
"ci-x64-Release-MSVC" |
||||
], |
||||
"filter": { |
||||
"exclude": { |
||||
"name": "H5DUMP-tfloatsattrs" |
||||
} |
||||
} |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-Clang", |
||||
"configurePreset": "ci-StdShar-Clang", |
||||
"inherits": [ |
||||
"ci-x64-Release-Clang" |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-GNUC", |
||||
"configurePreset": "ci-StdShar-GNUC", |
||||
"inherits": [ |
||||
"ci-x64-Release-GNUC" |
||||
] |
||||
} |
||||
], |
||||
"packagePresets": [ |
||||
{ |
||||
"name": "ci-StdShar-MSVC", |
||||
"configurePreset": "ci-StdShar-MSVC", |
||||
"inherits": "ci-x64-Release-MSVC" |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-Clang", |
||||
"configurePreset": "ci-StdShar-Clang", |
||||
"inherits": "ci-x64-Release-Clang" |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-GNUC", |
||||
"configurePreset": "ci-StdShar-GNUC", |
||||
"inherits": "ci-x64-Release-GNUC" |
||||
} |
||||
], |
||||
"workflowPresets": [ |
||||
{ |
||||
"name": "ci-StdShar-MSVC", |
||||
"steps": [ |
||||
{"type": "configure", "name": "ci-StdShar-MSVC"}, |
||||
{"type": "build", "name": "ci-StdShar-MSVC"}, |
||||
{"type": "test", "name": "ci-StdShar-MSVC"}, |
||||
{"type": "package", "name": "ci-StdShar-MSVC"} |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-Clang", |
||||
"steps": [ |
||||
{"type": "configure", "name": "ci-StdShar-Clang"}, |
||||
{"type": "build", "name": "ci-StdShar-Clang"}, |
||||
{"type": "test", "name": "ci-StdShar-Clang"}, |
||||
{"type": "package", "name": "ci-StdShar-Clang"} |
||||
] |
||||
}, |
||||
{ |
||||
"name": "ci-StdShar-GNUC", |
||||
"steps": [ |
||||
{"type": "configure", "name": "ci-StdShar-GNUC"}, |
||||
{"type": "build", "name": "ci-StdShar-GNUC"}, |
||||
{"type": "test", "name": "ci-StdShar-GNUC"}, |
||||
{"type": "package", "name": "ci-StdShar-GNUC"} |
||||
] |
||||
} |
||||
] |
||||
} |
||||
@ -0,0 +1,128 @@ |
||||
# Contributor Covenant Code of Conduct |
||||
|
||||
## Our Pledge |
||||
|
||||
We as members, contributors, and leaders pledge to make participation in our |
||||
community a harassment-free experience for everyone, regardless of age, body |
||||
size, visible or invisible disability, ethnicity, sex characteristics, gender |
||||
identity and expression, level of experience, education, socio-economic status, |
||||
nationality, personal appearance, race, religion, or sexual identity |
||||
and orientation. |
||||
|
||||
We pledge to act and interact in ways that contribute to an open, welcoming, |
||||
diverse, inclusive, and healthy community. |
||||
|
||||
## Our Standards |
||||
|
||||
Examples of behavior that contributes to a positive environment for our |
||||
community include: |
||||
|
||||
* Demonstrating empathy and kindness toward other people |
||||
* Being respectful of differing opinions, viewpoints, and experiences |
||||
* Giving and gracefully accepting constructive feedback |
||||
* Accepting responsibility and apologizing to those affected by our mistakes, |
||||
and learning from the experience |
||||
* Focusing on what is best not just for us as individuals, but for the |
||||
overall community |
||||
|
||||
Examples of unacceptable behavior include: |
||||
|
||||
* The use of sexualized language or imagery, and sexual attention or |
||||
advances of any kind |
||||
* Trolling, insulting or derogatory comments, and personal or political attacks |
||||
* Public or private harassment |
||||
* Publishing others' private information, such as a physical or email |
||||
address, without their explicit permission |
||||
* Other conduct which could reasonably be considered inappropriate in a |
||||
professional setting |
||||
|
||||
## Enforcement Responsibilities |
||||
|
||||
Community leaders are responsible for clarifying and enforcing our standards of |
||||
acceptable behavior and will take appropriate and fair corrective action in |
||||
response to any behavior that they deem inappropriate, threatening, offensive, |
||||
or harmful. |
||||
|
||||
Community leaders have the right and responsibility to remove, edit, or reject |
||||
comments, commits, code, wiki edits, issues, and other contributions that are |
||||
not aligned to this Code of Conduct, and will communicate reasons for moderation |
||||
decisions when appropriate. |
||||
|
||||
## Scope |
||||
|
||||
This Code of Conduct applies within all community spaces, and also applies when |
||||
an individual is officially representing the community in public spaces. |
||||
Examples of representing our community include using an official e-mail address, |
||||
posting via an official social media account, or acting as an appointed |
||||
representative at an online or offline event. |
||||
|
||||
## Enforcement |
||||
|
||||
Instances of abusive, harassing, or otherwise unacceptable behavior may be |
||||
reported to the community leaders responsible for enforcement at |
||||
help@hdfgroup.org. |
||||
All complaints will be reviewed and investigated promptly and fairly. |
||||
|
||||
All community leaders are obligated to respect the privacy and security of the |
||||
reporter of any incident. |
||||
|
||||
## Enforcement Guidelines |
||||
|
||||
Community leaders will follow these Community Impact Guidelines in determining |
||||
the consequences for any action they deem in violation of this Code of Conduct: |
||||
|
||||
### 1. Correction |
||||
|
||||
**Community Impact**: Use of inappropriate language or other behavior deemed |
||||
unprofessional or unwelcome in the community. |
||||
|
||||
**Consequence**: A private, written warning from community leaders, providing |
||||
clarity around the nature of the violation and an explanation of why the |
||||
behavior was inappropriate. A public apology may be requested. |
||||
|
||||
### 2. Warning |
||||
|
||||
**Community Impact**: A violation through a single incident or series |
||||
of actions. |
||||
|
||||
**Consequence**: A warning with consequences for continued behavior. No |
||||
interaction with the people involved, including unsolicited interaction with |
||||
those enforcing the Code of Conduct, for a specified period of time. This |
||||
includes avoiding interactions in community spaces as well as external channels |
||||
like social media. Violating these terms may lead to a temporary or |
||||
permanent ban. |
||||
|
||||
### 3. Temporary Ban |
||||
|
||||
**Community Impact**: A serious violation of community standards, including |
||||
sustained inappropriate behavior. |
||||
|
||||
**Consequence**: A temporary ban from any sort of interaction or public |
||||
communication with the community for a specified period of time. No public or |
||||
private interaction with the people involved, including unsolicited interaction |
||||
with those enforcing the Code of Conduct, is allowed during this period. |
||||
Violating these terms may lead to a permanent ban. |
||||
|
||||
### 4. Permanent Ban |
||||
|
||||
**Community Impact**: Demonstrating a pattern of violation of community |
||||
standards, including sustained inappropriate behavior, harassment of an |
||||
individual, or aggression toward or disparagement of classes of individuals. |
||||
|
||||
**Consequence**: A permanent ban from any sort of public interaction within |
||||
the community. |
||||
|
||||
## Attribution |
||||
|
||||
This Code of Conduct is adapted from the [Contributor Covenant][homepage], |
||||
version 2.0, available at |
||||
https://www.contributor-covenant.org/version/2/0/code_of_conduct.html. |
||||
|
||||
Community Impact Guidelines were inspired by [Mozilla's code of conduct |
||||
enforcement ladder](https://github.com/mozilla/diversity). |
||||
|
||||
[homepage]: https://www.contributor-covenant.org |
||||
|
||||
For answers to common questions about this code of conduct, see the FAQ at |
||||
https://www.contributor-covenant.org/faq. Translations are available at |
||||
https://www.contributor-covenant.org/translations. |
||||
@ -0,0 +1,136 @@ |
||||
# How to contribute to HDF5 |
||||
|
||||
The HDF Group encourages community members to contribute to the HDF5 project. We accept and are very grateful for any contributions, |
||||
from minor typos and bug fixes to new features. The HDF Group is committed to work with the code contributors and make contribution |
||||
process enjoyable and straightforward. |
||||
|
||||
This document describes guiding principles for the HDF5 code contributors and does not pretend to address any possible |
||||
contribution. If in doubt, please do not hesitate to ask us for guidance. |
||||
***Note that no contribution may be accepted unless the donor agrees with the HDF Group software license terms |
||||
found in the COPYING file in every branch's top source directory.*** |
||||
|
||||
|
||||
> We will assume that you are familiar with `git` and `GitHub`. If not, you may go through the GitHub tutorial found at |
||||
[https://guides.github.com/activities/hello-world/](https://guides.github.com/activities/hello-world/). This tutorial should only take |
||||
around 10 minutes. |
||||
|
||||
## Table of Contents |
||||
|
||||
* [Workflow](#workflow) |
||||
* [Acceptance criteria for a pull request](#criteria) |
||||
* [Release Note](#releasenote) |
||||
* [Check List](#checklist) |
||||
|
||||
# Workflow <A NAME="workflow"></A> |
||||
|
||||
The process for contributing code to HDF5 is as follows: |
||||
|
||||
* Open an issue on [HDF5 GitHub](https://github.com/HDFGroup/hdf5/issues). |
||||
|
||||
> This step is ***required*** unless the change is minor (e.g., typo fix). |
||||
|
||||
* Fork the [HDF5](https://github.com/HDFGroup/hdf5) repository. |
||||
* Make the desired changes to the HDF5 software. |
||||
* New features should always go to _develop_ branch first and later should be merged to the appropriate maintenance branches. |
||||
* Bug fixes should go to all appropriate branches (_develop_ and maintenance). |
||||
* Build and test your changes. Detailed instructions on building and testing HDF5 can be found in the `INSTALL*` files in the `release_docs` directory. |
||||
* Push your changes to GitHub. |
||||
* Issue a pull request and address any code formatting and testing issues reported. |
||||
|
||||
Once a pull request is correctly formatted and passes **ALL** CI tests, it will be reviewed and evaluated by The HDF Group developers and HDF5 |
||||
community members who can approve pull requests. The HDF Group developers will work with you to ensure that the pull request satisfies the acceptance |
||||
criteria described in the next section. |
||||
|
||||
# Acceptance criteria for a pull request <A NAME="criteria"></A> |
||||
|
||||
We appreciate every contribution we receive, but we may not accept them all. Those that we *do* satisfy the following criteria: |
||||
|
||||
* **The pull request has a clear purpose** - What does the pull request address? How does it benefit the HDF5 community? |
||||
If the pull request does not have a clear purpose and benefits, it will not be accepted. |
||||
|
||||
* **The pull request is documented** - The HDF5 developers must understand not only *what* a change is doing, but *how* it is doing it. |
||||
Documenting the code makes it easier for us to understand your patch and maintain the code in the future. |
||||
|
||||
* **The pull request passes HDF5 regression testing** - Any issue fixed or functionality added should be accompanied by the corresponding |
||||
tests and pass HDF5 regression testing run by The HDF Group. We do not expect you to perform comprehensive testing across multiple platforms |
||||
before we accept the pull request. If the pull request does not pass regression testing after the merge, The HDF Group developers will work |
||||
with you on the fixes. |
||||
|
||||
* **The pull request does not compromise the principles behind HDF5** - HDF5 has a 100% commitment to backward compatibility. |
||||
* Any file ever created with HDF5 must be readable by any future version of HDF5. |
||||
If your patch's purpose is to modify the HDF5 data model or file format, |
||||
**please** discuss this with us first. File format changes and features required by those changes can be introduced only in a new major release. |
||||
* HDF5 has a commitment to remaining *machine-independent*; data created on one platform/environment/architecture **must** remain readable by HDF5 on any other. |
||||
* For binary compatibility, no changes are allowed to public APIs and data structures in the maintenance releases; new APIs can be added. |
||||
|
||||
* **New features are documented** - Any new features should have proper documentation; talk to us if you have any questions. |
||||
|
||||
* **When to Write a Release Note** - Generally, a release note must be written for every change that is made to the code for which |
||||
users might see a change in the way the software works. In other words, if a user might see a difference in the way the software works, |
||||
a note should be written. By code we mean the text that will be compiled into one of the company's software products. The code includes |
||||
configuration changes and changes to tools users might work with to configure and build our software. |
||||
|
||||
* Notes should be added for known problems. Known problems are issues that we know about and have not yet been able to fix. |
||||
|
||||
* Any change made to address a user-reported problem should be described in a release note. |
||||
|
||||
* A release note does not need to be written for changes to the code that users will not see. Here are some examples. If you add a |
||||
comment, you do not need to write a release note describing the comment you added. If you rewrite some code to make it read more |
||||
clearly and if there is no change in functionality or performance, then you do not need to write a release note. If you change the |
||||
process by which user software is made, you may not need to write a release note since the change was not made to the code. |
||||
|
||||
* Users. We have different kinds of users. A release note may be written to be helpful to |
||||
application developers and not system administrators. Users who may find the RELEASE.txt file helpful include the following: |
||||
application developers, library developers, and system administrators. |
||||
|
||||
|
||||
# Release Note <A NAME="releasenote"></A> |
||||
|
||||
* **Entry Syntax** |
||||
The release note entry syntax is shown below. |
||||
|
||||
``` |
||||
- Title/Problem |
||||
|
||||
Problem/Solution |
||||
|
||||
``` |
||||
|
||||
* **Entry Elements** - The elements of the entry - title, problem, solution, and signature - are described in more detail in the table |
||||
below. Descriptions of the problem and the solution should be clear without any ambiguities and should be short without losing clarity or specifics. |
||||
|
||||
* **Title** - The title or tag should identify one or more categories that will help readers decide if the entry is something they need to study. Can be combined with the `Problem` element |
||||
* **Problem** - Describe the problem and how users might see the problem in a paragraph. |
||||
You might also consider the following as you describe the problem: |
||||
* Under what specific conditions does this issue arise? |
||||
* Under what specific conditions are we sure this issue will not arise? |
||||
* For a performance issue, instead of saying something is a performance issue, describe what the performance impact of issue is? |
||||
* **Solution** - Describe the solution in another paragraph. |
||||
You might also consider the following as you describe the solution: |
||||
* What was done to resolve the issue? |
||||
* What is the functional impact? |
||||
* Is there a workaround – a way for users design their software so as not to encounter the issue? If so, what is the workaround? |
||||
* For a performance fix, how has the performance improved? Links to published documentation would be good. |
||||
|
||||
# Checklist <A NAME="checklist"></A> |
||||
|
||||
Please make sure that you check the items applicable to your pull request: |
||||
|
||||
* Code |
||||
* [ ] Does the pull request have a corresponding GitHub issue and clear purpose? |
||||
* [ ] Does the pull request follow HDF5 best practices (naming conventions, code portability, code structure, etc.)? <<TODO: link to the document>> |
||||
* [ ] If changes were done to Autotools build, were they added to CMake and vice versa? |
||||
* [ ] Is the pull request applicable to any other branches? If yes, which ones? Please document it in the GitHub issue. |
||||
* [ ] Is the new code sufficiently documented for future maintenance? |
||||
* [ ] Does the new feature require a change to an existing API? See "API Compatibility Macros" document (https://portal.hdfgroup.org/display/HDF5/API+Compatibility+Macros) |
||||
* Documentation |
||||
* [ ] Was the change described in the release_docs/RELEASE.txt file? |
||||
* [ ] Was the new function documented in the corresponding public header file using [Doxygen](https://docs.hdfgroup.org/hdf5/develop/_r_m_t.html)? |
||||
* [ ] Was new functionality documented for the HDF5 community (the level of documentation depends on the feature; ask us what would be appropriate) |
||||
* Testing |
||||
* [ ] Does the pull request have tests? |
||||
* [ ] Does the pull request affect HDF5 library performance? |
||||
|
||||
We want as many contributions as we can get, and we are here to help. Feel free to reach out to us if you have any questions |
||||
|
||||
Thank you for your contribution! |
||||
@ -0,0 +1,106 @@ |
||||
Copyright Notice and License Terms for |
||||
HDF5 (Hierarchical Data Format 5) Software Library and Utilities |
||||
----------------------------------------------------------------------------- |
||||
|
||||
HDF5 (Hierarchical Data Format 5) Software Library and Utilities |
||||
Copyright 2006 by The HDF Group. |
||||
|
||||
NCSA HDF5 (Hierarchical Data Format 5) Software Library and Utilities |
||||
Copyright 1998-2006 by The Board of Trustees of the University of Illinois. |
||||
|
||||
All rights reserved. |
||||
|
||||
Redistribution and use in source and binary forms, with or without |
||||
modification, are permitted for any purpose (including commercial purposes) |
||||
provided that the following conditions are met: |
||||
|
||||
1. Redistributions of source code must retain the above copyright notice, |
||||
this list of conditions, and the following disclaimer. |
||||
|
||||
2. Redistributions in binary form must reproduce the above copyright notice, |
||||
this list of conditions, and the following disclaimer in the documentation |
||||
and/or materials provided with the distribution. |
||||
|
||||
3. Neither the name of The HDF Group, the name of the University, nor the |
||||
name of any Contributor may be used to endorse or promote products derived |
||||
from this software without specific prior written permission from |
||||
The HDF Group, the University, or the Contributor, respectively. |
||||
|
||||
DISCLAIMER: |
||||
THIS SOFTWARE IS PROVIDED BY THE HDF GROUP AND THE CONTRIBUTORS |
||||
"AS IS" WITH NO WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED. IN NO |
||||
EVENT SHALL THE HDF GROUP OR THE CONTRIBUTORS BE LIABLE FOR ANY DAMAGES |
||||
SUFFERED BY THE USERS ARISING OUT OF THE USE OF THIS SOFTWARE, EVEN IF |
||||
ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. |
||||
|
||||
You are under no obligation whatsoever to provide any bug fixes, patches, or |
||||
upgrades to the features, functionality or performance of the source code |
||||
("Enhancements") to anyone; however, if you choose to make your Enhancements |
||||
available either publicly, or directly to The HDF Group, without imposing a |
||||
separate written license agreement for such Enhancements, then you hereby |
||||
grant the following license: a non-exclusive, royalty-free perpetual license |
||||
to install, use, modify, prepare derivative works, incorporate into other |
||||
computer software, distribute, and sublicense such enhancements or derivative |
||||
works thereof, in binary and source code form. |
||||
|
||||
----------------------------------------------------------------------------- |
||||
----------------------------------------------------------------------------- |
||||
|
||||
Limited portions of HDF5 were developed by Lawrence Berkeley National |
||||
Laboratory (LBNL). LBNL's Copyright Notice and Licensing Terms can be |
||||
found here: COPYING_LBNL_HDF5 file in this directory or at |
||||
http://support.hdfgroup.org/ftp/HDF5/releases/COPYING_LBNL_HDF5. |
||||
|
||||
----------------------------------------------------------------------------- |
||||
----------------------------------------------------------------------------- |
||||
|
||||
Contributors: National Center for Supercomputing Applications (NCSA) at |
||||
the University of Illinois, Fortner Software, Unidata Program Center |
||||
(netCDF), The Independent JPEG Group (JPEG), Jean-loup Gailly and Mark Adler |
||||
(gzip), and Digital Equipment Corporation (DEC). |
||||
|
||||
----------------------------------------------------------------------------- |
||||
|
||||
Portions of HDF5 were developed with support from the Lawrence Berkeley |
||||
National Laboratory (LBNL) and the United States Department of Energy |
||||
under Prime Contract No. DE-AC02-05CH11231. |
||||
|
||||
----------------------------------------------------------------------------- |
||||
|
||||
Portions of HDF5 were developed with support from Lawrence Livermore |
||||
National Laboratory and the United States Department of Energy under |
||||
Prime Contract No. DE-AC52-07NA27344. |
||||
|
||||
----------------------------------------------------------------------------- |
||||
|
||||
Portions of HDF5 were developed with support from the University of |
||||
California, Lawrence Livermore National Laboratory (UC LLNL). |
||||
The following statement applies to those portions of the product and must |
||||
be retained in any redistribution of source code, binaries, documentation, |
||||
and/or accompanying materials: |
||||
|
||||
This work was partially produced at the University of California, |
||||
Lawrence Livermore National Laboratory (UC LLNL) under contract |
||||
no. W-7405-ENG-48 (Contract 48) between the U.S. Department of Energy |
||||
(DOE) and The Regents of the University of California (University) |
||||
for the operation of UC LLNL. |
||||
|
||||
DISCLAIMER: |
||||
THIS WORK WAS PREPARED AS AN ACCOUNT OF WORK SPONSORED BY AN AGENCY OF |
||||
THE UNITED STATES GOVERNMENT. NEITHER THE UNITED STATES GOVERNMENT NOR |
||||
THE UNIVERSITY OF CALIFORNIA NOR ANY OF THEIR EMPLOYEES, MAKES ANY |
||||
WARRANTY, EXPRESS OR IMPLIED, OR ASSUMES ANY LIABILITY OR RESPONSIBILITY |
||||
FOR THE ACCURACY, COMPLETENESS, OR USEFULNESS OF ANY INFORMATION, |
||||
APPARATUS, PRODUCT, OR PROCESS DISCLOSED, OR REPRESENTS THAT ITS USE |
||||
WOULD NOT INFRINGE PRIVATELY- OWNED RIGHTS. REFERENCE HEREIN TO ANY |
||||
SPECIFIC COMMERCIAL PRODUCTS, PROCESS, OR SERVICE BY TRADE NAME, |
||||
TRADEMARK, MANUFACTURER, OR OTHERWISE, DOES NOT NECESSARILY CONSTITUTE |
||||
OR IMPLY ITS ENDORSEMENT, RECOMMENDATION, OR FAVORING BY THE UNITED |
||||
STATES GOVERNMENT OR THE UNIVERSITY OF CALIFORNIA. THE VIEWS AND |
||||
OPINIONS OF AUTHORS EXPRESSED HEREIN DO NOT NECESSARILY STATE OR REFLECT |
||||
THOSE OF THE UNITED STATES GOVERNMENT OR THE UNIVERSITY OF CALIFORNIA, |
||||
AND SHALL NOT BE USED FOR ADVERTISING OR PRODUCT ENDORSEMENT PURPOSES. |
||||
|
||||
----------------------------------------------------------------------------- |
||||
|
||||
|
||||
@ -0,0 +1,61 @@ |
||||
**************************** |
||||
*** Copyright Notice *** |
||||
Hierarchical Data Format 5 (HDF5) v1.12.0 Copyright (c) 2020, HDF Group and The |
||||
Regents of the University of California, through Lawrence Berkeley National |
||||
Laboratory (subject to receipt of any required approvals from the U.S. Dept. of |
||||
Energy). All rights reserved. |
||||
|
||||
If you have questions about your rights to use or distribute this software, |
||||
please contact Berkeley Lab's Intellectual Property Office at IPO@lbl.gov. |
||||
|
||||
NOTICE. This Software was partially developed under funding from the U.S. |
||||
Department of Energy and the U.S. Government consequently retains certain |
||||
rights. As such, the U.S. Government has been granted for itself and others |
||||
acting on its behalf a paid-up, nonexclusive, irrevocable, worldwide license in |
||||
the Software to reproduce, distribute copies to the public, prepare derivative |
||||
works, and perform publicly and display publicly, and to permit others to do so. |
||||
|
||||
**************************** |
||||
*** License Agreement *** |
||||
|
||||
Hierarchical Data Format 5 (HDF5) v1.12.0 Copyright (c) 2020, HDF Group and The |
||||
Regents of the University of California, through Lawrence Berkeley National |
||||
Laboratory (subject to receipt of any required approvals from the U.S. Dept. of |
||||
Energy). All rights reserved. |
||||
|
||||
Redistribution and use in source and binary forms, with or without modification, |
||||
are permitted provided that the following conditions are met: |
||||
|
||||
(1) Redistributions of source code must retain the above copyright notice, this |
||||
list of conditions and the following disclaimer. |
||||
|
||||
(2) Redistributions in binary form must reproduce the above copyright notice, |
||||
this list of conditions and the following disclaimer in the documentation and/or |
||||
other materials provided with the distribution. |
||||
|
||||
(3) Neither the name of the HDF Group, University of California, Lawrence |
||||
Berkeley National Laboratory, U.S. Dept. of Energy, nor the names of its |
||||
contributors may be used to endorse or promote products derived from this |
||||
software without specific prior written permission. |
||||
|
||||
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND |
||||
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED |
||||
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE |
||||
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR |
||||
ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES |
||||
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; |
||||
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON |
||||
ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT |
||||
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS |
||||
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. |
||||
|
||||
You are under no obligation whatsoever to provide any bug fixes, patches, or |
||||
upgrades to the features, functionality or performance of the source code |
||||
("Enhancements") to anyone; however, if you choose to make your Enhancements |
||||
available either publicly, or directly to Lawrence Berkeley National Laboratory, |
||||
without imposing a separate written license agreement for such Enhancements, |
||||
then you hereby grant the following license: a non-exclusive, royalty-free |
||||
perpetual license to install, use, modify, prepare derivative works, incorporate |
||||
into other computer software, distribute, and sublicense such enhancements or |
||||
derivative works thereof, in binary and source code form. |
||||
|
||||
@ -0,0 +1,52 @@ |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
## This file should be placed in the root directory of your project. |
||||
## Then modify the CMakeLists.txt file in the root directory of your |
||||
## project to incorporate the testing dashboard. |
||||
## # The following are required to use Dart and the CDash dashboard |
||||
## ENABLE_TESTING() |
||||
## INCLUDE(CTest) |
||||
set (CTEST_PROJECT_NAME "HDF5") |
||||
set (CTEST_NIGHTLY_START_TIME "18:00:00 CST") |
||||
|
||||
set (CTEST_DROP_METHOD "https") |
||||
if (CTEST_DROP_SITE_INIT) |
||||
set (CTEST_DROP_SITE "${CTEST_DROP_SITE_INIT}") |
||||
else () |
||||
if (CDASH_LOCAL) |
||||
set (CTEST_DROP_SITE "cdash-internal.hdfgroup.org") |
||||
else () |
||||
set (CTEST_DROP_SITE "cdash.hdfgroup.org") |
||||
endif () |
||||
endif () |
||||
if (CTEST_DROP_LOCATION_INIT) |
||||
set (CTEST_DROP_LOCATION "${CTEST_DROP_LOCATION_INIT}") |
||||
else () |
||||
if (CDASH_LOCAL) |
||||
set (CTEST_DROP_LOCATION "/submit.php?project=HDF5114") |
||||
else () |
||||
set (CTEST_DROP_LOCATION "/submit.php?project=HDF5") |
||||
endif () |
||||
endif () |
||||
set (CTEST_DROP_SITE_CDASH TRUE) |
||||
|
||||
set (UPDATE_TYPE git) |
||||
set (VALGRIND_COMMAND "/usr/bin/valgrind") |
||||
set (VALGRIND_COMMAND_OPTIONS "-v --tool=memcheck --leak-check=full --track-fds=yes --num-callers=50 --show-reachable=yes --track-origins=yes --malloc-fill=0xff --free-fill=0xfe") |
||||
|
||||
set (CTEST_TEST_TIMEOUT 1200 CACHE STRING |
||||
"Maximum time allowed before CTest will kill the test.") |
||||
set (DART_TESTING_TIMEOUT 1200 CACHE STRING |
||||
"Maximum time allowed before CTest will kill the test." FORCE) |
||||
|
||||
set (CTEST_SUBMIT_RETRY_DELAY 20 CACHE STRING |
||||
"How long to wait between timed-out CTest submissions.") |
||||
@ -0,0 +1 @@ |
||||
zlib >= 1.1.2 |
||||
@ -0,0 +1,226 @@ |
||||
#
|
||||
# Copyright by The HDF Group.
|
||||
# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF5. The full HDF5 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the COPYING file, which can be found at the root of the source code
|
||||
# distribution tree, or in https://www.hdfgroup.org/licenses.
|
||||
# If you do not have access to either file, you may request a copy from
|
||||
# help@hdfgroup.org.
|
||||
##
|
||||
## Makefile.am
|
||||
## Run automake to generate a Makefile.in from this file.
|
||||
##
|
||||
#
|
||||
# This makefile mostly just reinvokes make in the various subdirectories
|
||||
# but does so in the correct order. You can alternatively invoke make from
|
||||
# each subdirectory manually.
|
||||
#
|
||||
# Top-level HDF5 Makefile(.in)
|
||||
|
||||
# pmake has issues if variables are undefined. Solve this problem in
|
||||
# top-level Makefile by defining .MAKEFLAGS target to -V before pmake can
|
||||
# encounter any undefined variables.
|
||||
# Automake resists putting anything but variable definitions first in
|
||||
# a Makefile.in, so we'll put a placebo comment here and use sed in
|
||||
# bin/reconfigure to turn it into the .MAKEFLAGS target. Sigh. -JL 2005
|
||||
# Configure should set AM_MAKEFLAGS to -V to solve this problem in
|
||||
# subdirectories.
|
||||
# NOTE: This means that invoking pmake in a subdirectory will not work.
|
||||
#xxx.MAKEFLAGS:@AM_MAKEFLAGS@
|
||||
#xxx $(MAKE) all
|
||||
#xxx
|
||||
|
||||
include $(top_srcdir)/config/commence.am |
||||
|
||||
# include Doxygen rules (requires autoconf-archive >2016-03-20)
|
||||
@DX_RULES@ |
||||
|
||||
# Define subdirectories to build.
|
||||
## Automake understands that `make distclean' should recurse into
|
||||
## conditional subdirectories even if `make all' does not.
|
||||
## We need to list the examples directory in the DIST_SUBDIRS variable
|
||||
## so that it will be visited by `make distclean'
|
||||
# Add this directory to SUBDIRS so that examples get built after tools
|
||||
# but before examples in extra interfaces (c++ and fortran).
|
||||
# Since we're explicitly listing DIST_SUBDIRS, we also need to list
|
||||
# directories that are only conditionally built (so that their Makefiles
|
||||
# are cleaned as well).
|
||||
# Note that `make clean' will not affect the examples or doc directories.
|
||||
|
||||
# Conditionals. These conditionals are defined during configure
|
||||
# Define each variable to empty if it is not used to placate pmake
|
||||
if BUILD_CXX_CONDITIONAL |
||||
CXX_DIR =c++
|
||||
else |
||||
CXX_DIR=
|
||||
endif |
||||
if BUILD_FORTRAN_CONDITIONAL |
||||
FORTRAN_DIR =fortran
|
||||
else |
||||
FORTRAN_DIR=
|
||||
endif |
||||
if BUILD_JAVA_CONDITIONAL |
||||
JAVA_DIR=java
|
||||
else |
||||
JAVA_DIR=
|
||||
endif |
||||
if BUILD_HDF5_HL_CONDITIONAL |
||||
HDF5_HL_DIR =hl
|
||||
else |
||||
HDF5_HL_DIR=
|
||||
endif |
||||
if BUILD_TESTS_CONDITIONAL |
||||
TESTSERIAL_DIR =test
|
||||
else |
||||
TESTSERIAL_DIR=
|
||||
endif |
||||
if BUILD_TESTS_PARALLEL_CONDITIONAL |
||||
TESTPARALLEL_DIR =testpar
|
||||
else |
||||
TESTPARALLEL_DIR=
|
||||
endif |
||||
if BUILD_TOOLS_CONDITIONAL |
||||
TOOLS_DIR =tools
|
||||
else |
||||
TOOLS_DIR=
|
||||
endif |
||||
|
||||
SUBDIRS = src $(TESTSERIAL_DIR) $(TESTPARALLEL_DIR) bin $(TOOLS_DIR) utils . \
|
||||
$(CXX_DIR) $(FORTRAN_DIR) $(JAVA_DIR) $(HDF5_HL_DIR)
|
||||
DIST_SUBDIRS = src test testpar bin tools utils . c++ fortran hl examples java
|
||||
|
||||
# Some files generated during configure that should be cleaned
|
||||
DISTCLEANFILES=config/stamp1 config/stamp2
|
||||
|
||||
# Some files/directories generated during check that should be cleaned
|
||||
CHECK_CLEANFILES+=*-tmp
|
||||
|
||||
# Define rules for lib, progs, check, and tests.
|
||||
# These simply involve recursing into subdirectories.
|
||||
test _test: check |
||||
|
||||
lib progs check-p check-s: |
||||
for d in $(SUBDIRS); do \
|
||||
if test $$d != .; then \
|
||||
(cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
|
||||
fi; \
|
||||
done
|
||||
|
||||
# Make all, tests, and (un)install
|
||||
tests: |
||||
for d in $(SUBDIRS); do \
|
||||
if test $$d != .; then \
|
||||
(cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
|
||||
fi; \
|
||||
done
|
||||
|
||||
# Check-clean also recurses into examples directory
|
||||
check-clean: |
||||
for d in $(SUBDIRS) examples; do \
|
||||
if test $$d != .; then \
|
||||
(cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
|
||||
fi; \
|
||||
done
|
||||
$(RM) -rf prefix-tmp destdir-tmp
|
||||
|
||||
# Some C++ compilers/linkers will create a directory named ii_files in
|
||||
# the root directory, which should be cleaned.
|
||||
mostlyclean-local: |
||||
if test -d ii_files; then \
|
||||
$(RM) -rf ii_files; \
|
||||
fi
|
||||
|
||||
# 'make install' will now install examples, the same as 'make install-all'.
|
||||
# 'make-install-all' will be redundant but will still work.
|
||||
install: install-recursive install-examples |
||||
uninstall: uninstall-recursive uninstall-examples |
||||
|
||||
# 'make install-all' also installs examples
|
||||
install-all: |
||||
@$(MAKE) $(AM_MAKEFLAGS) install
|
||||
uninstall-all: |
||||
@$(MAKE) $(AM_MAKEFLAGS) uninstall
|
||||
|
||||
# Install examples in this directory and recursively
|
||||
install-examples uninstall-examples: |
||||
for d in examples $(HDF5_INTERFACES) $(HL); do \
|
||||
(cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
|
||||
done
|
||||
|
||||
# Placeholder to remind users that docs are now in a separate repository.
|
||||
install-doc: |
||||
@echo "docs no longer live in this tree. Use install-examples to install examples."
|
||||
|
||||
uninstall-doc: |
||||
@echo "docs no longer live in this tree. Use install-examples to install examples."
|
||||
|
||||
# `make check-install' or `make installcheck' checks that examples can
|
||||
# be successfully built
|
||||
installcheck-local: |
||||
if test -n "${DESTDIR}"; then \
|
||||
(cd ${DESTDIR}$(bindir) && pwd && ./h5redeploy -force); \
|
||||
fi
|
||||
@(cd examples && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1;
|
||||
|
||||
# check-install is just a synonym for installcheck
|
||||
check-install: installcheck |
||||
|
||||
# check-all-install tests all installation methods.
|
||||
# Install via different mechanism and then compare against the default.
|
||||
# Fine if only libXXX.a files are different since they may have been ranlib'ed.
|
||||
check-all-install: |
||||
@echo Installing to default location
|
||||
$(MAKE) install
|
||||
@echo Installing to different prefix location
|
||||
$(MAKE) prefix=${ROOT}/prefix-tmp install
|
||||
@echo Compare against the default installation.
|
||||
@echo Fine if only libXXX.a files are different.
|
||||
-diff -r prefix-tmp ${prefix}
|
||||
@echo Installing to different $$\DESTDIR location
|
||||
env DESTDIR=${ROOT}/destdir-tmp $(MAKE) install
|
||||
@echo Compare against the default installation.
|
||||
@echo Fine if only libXXX.a files are different.
|
||||
-diff -r destdir-tmp${prefix} ${prefix}
|
||||
|
||||
# Only source files in the src directory include tracing information,
|
||||
# so 'make trace' only needs to recurse into that directory.
|
||||
trace: |
||||
@(cd src && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1;
|
||||
|
||||
# doxygen support
|
||||
if BUILD_DOXYGEN_CONDITIONAL |
||||
doxygen: doxygen-doc |
||||
endif |
||||
|
||||
# Run tests with different Virtual File Drivers.
|
||||
# Currently, only invoke check-vfd in the test directory.
|
||||
check-vfd: |
||||
for d in src utils test; do \
|
||||
if test $$d != .; then \
|
||||
(cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
|
||||
fi; \
|
||||
done
|
||||
|
||||
# Run tests with different passthrough Virtual Object Layer Connectors.
|
||||
# NOTE: Will only succeed with passthrough VOL connectors that use
|
||||
# the native VOL connector as the terminal connector.
|
||||
check-passthrough-vol: |
||||
for d in $(SUBDIRS); do \
|
||||
if test $$d != .; then \
|
||||
(cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
|
||||
fi; \
|
||||
done
|
||||
|
||||
# Automake wants to make config.status depend on configure. This
|
||||
# makes sense, but config.status can't always be regenerated
|
||||
# properly, which can cause builds to fail.
|
||||
# This is a problem for our Daily Tests, which need to be able to
|
||||
# 'make distclean' reliably before running configure.
|
||||
# The simple solution is to override the dependency Automake supplies
|
||||
# for config.status so that it will never be regenerated.
|
||||
$(top_builddir)/config.status: |
||||
|
||||
# Don't include conclude.am in root Makefile; tests target needs to
|
||||
# recurse into reguar subdirs.
|
||||
@ -0,0 +1,34 @@ |
||||
# Top-level distributed Makefile -*- makefile -*-
|
||||
|
||||
# Copyright by The HDF Group.
|
||||
# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF5. The full HDF5 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the COPYING file, which can be found at the root of the source code
|
||||
# distribution tree, or in https://www.hdfgroup.org/licenses.
|
||||
# If you do not have access to either file, you may request a copy from
|
||||
# help@hdfgroup.org.
|
||||
|
||||
# This Makefile is a stub (copied from Makefile.dist) which will run
|
||||
# configure and then invoke the same target in the new Makefile created
|
||||
# by configure.
|
||||
|
||||
# Uncomment this variable if your make(1) doesn't set it automatically.
|
||||
#
|
||||
#MAKE=make
|
||||
|
||||
|
||||
SHELL=/bin/sh
|
||||
|
||||
all lib progs check test _test install uninstall dep depend: _config |
||||
$(MAKE) $@
|
||||
|
||||
clean mostlyclean distclean maintainer-clean TAGS: _config |
||||
$(MAKE) $@
|
||||
|
||||
_config: |
||||
sh configure
|
||||
|
||||
.PHONY: all lib progs test install uninstall dep depend clean mostlyclean \
|
||||
distclean maintainer-clean _config
|
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,88 @@ |
||||
HDF5 version 1.14.1-2 released on 2023-05-11 |
||||
|
||||
 |
||||
|
||||
[](https://github.com/HDFGroup/hdf5/actions?query=branch%3Ahdf5_1_14) |
||||
[](https://github.com/HDFGroup/hdf5/blob/develop/COPYING) |
||||
|
||||
*Please refer to the release_docs/INSTALL file for installation instructions.* |
||||
|
||||
This repository contains a high-performance library's source code and a file format |
||||
specification that implement the HDF5® data model. The model has been adopted across |
||||
many industries and this implementation has become a de facto data management standard |
||||
in science, engineering, and research communities worldwide. |
||||
|
||||
The HDF Group is the developer, maintainer, and steward of HDF5 software. Find more |
||||
information about The HDF Group, the HDF5 Community, and other HDF5 software projects, |
||||
tools, and services at The HDF Group's website. |
||||
|
||||
https://www.hdfgroup.org/ |
||||
|
||||
|
||||
DOCUMENTATION |
||||
------------- |
||||
This release is fully functional for the API described in the documentation. |
||||
|
||||
https://portal.hdfgroup.org/display/HDF5/The+HDF5+API |
||||
|
||||
Full Documentation and Programming Resources for this release can be found at |
||||
|
||||
https://portal.hdfgroup.org/display/HDF5 |
||||
|
||||
See the RELEASE.txt file in the release_docs/ directory for information specific |
||||
to the features and updates included in this release of the library. |
||||
|
||||
Several more files are located within the release_docs/ directory with specific |
||||
details for several common platforms and configurations. |
||||
|
||||
INSTALL - Start Here. General instructions for compiling and installing the library |
||||
INSTALL_CMAKE - instructions for building with CMake (Kitware.com) |
||||
INSTALL_parallel - instructions for building and configuring Parallel HDF5 |
||||
INSTALL_Windows and INSTALL_Cygwin - MS Windows installations. |
||||
|
||||
|
||||
|
||||
HELP AND SUPPORT |
||||
---------------- |
||||
Information regarding Help Desk and Support services is available at |
||||
|
||||
https://portal.hdfgroup.org/display/support/The+HDF+Help+Desk |
||||
|
||||
|
||||
|
||||
FORUM and NEWS |
||||
-------------- |
||||
The following public forums are provided for public announcements and discussions |
||||
of interest to the general HDF5 Community. |
||||
|
||||
- Homepage of the Forum |
||||
https://forum.hdfgroup.org |
||||
|
||||
- News and Announcement |
||||
https://forum.hdfgroup.org/c/news-and-announcements-from-the-hdf-group |
||||
|
||||
- HDF5 and HDF4 Topics |
||||
https://forum.hdfgroup.org/c/hdf5 |
||||
|
||||
These forums are provided as an open and public service for searching and reading. |
||||
Posting requires completing a simple registration and allows one to join in the |
||||
conversation. Please read the following instructions pertaining to the Forum's |
||||
use and configuration |
||||
https://forum.hdfgroup.org/t/quickstart-guide-welcome-to-the-new-hdf-forum |
||||
|
||||
|
||||
|
||||
SNAPSHOTS, PREVIOUS RELEASES AND SOURCE CODE |
||||
-------------------------------------------- |
||||
Periodically development code snapshots are provided at the following URL: |
||||
|
||||
https://gamma.hdfgroup.org/ftp/pub/outgoing/hdf5/snapshots/ |
||||
|
||||
Source packages for current and previous releases are located at: |
||||
|
||||
https://portal.hdfgroup.org/display/support/Downloads |
||||
|
||||
Development code is available at our Github location: |
||||
|
||||
https://github.com/HDFGroup/hdf5.git |
||||
|
||||
@ -0,0 +1,14 @@ |
||||
#!/usr/bin/env bash |
||||
|
||||
if [ -z "$1" ] |
||||
then |
||||
printf "Usage: setup.sh install_directory [dependencies].\n" |
||||
exit |
||||
fi |
||||
|
||||
cd $(dirname $0) |
||||
libname=$(basename $(pwd)) |
||||
./configure --prefix="$1" --with-zlib="$2" |
||||
make |
||||
make check -j8 |
||||
make install |
||||
@ -0,0 +1,32 @@ |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
######################################################## |
||||
# Include file for user options |
||||
######################################################## |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
#------------------- E X A M P L E B E G I N-------------------------------- |
||||
#----------------------------------------------------------------------------- |
||||
# Option to Build with User Defined Values |
||||
#----------------------------------------------------------------------------- |
||||
macro (MACRO_USER_DEFINED_LIBS) |
||||
set (USER_DEFINED_VALUE "FALSE") |
||||
endmacro () |
||||
|
||||
#------------------------------------------------------------------------------- |
||||
option (BUILD_USER_DEFINED_LIBS "Build With User Defined Values" OFF) |
||||
if (BUILD_USER_DEFINED_LIBS) |
||||
MACRO_USER_DEFINED_LIBS () |
||||
endif () |
||||
#----------------------------------------------------------------------------- |
||||
#------------------- E X A M P L E E N D ----------------------------------- |
||||
#----------------------------------------------------------------------------- |
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,53 @@ |
||||
dnl ------------------------------------------------------------------------- |
||||
dnl ------------------------------------------------------------------------- |
||||
dnl |
||||
dnl Copyright by The HDF Group. |
||||
dnl All rights reserved. |
||||
dnl |
||||
dnl This file is part of HDF5. The full HDF5 copyright notice, including |
||||
dnl terms governing use, modification, and redistribution, is contained in |
||||
dnl the COPYING file, which can be found at the root of the source code |
||||
dnl dnl distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
dnl dnl If you do not have access to either file, you may request a copy from |
||||
dnl dnl help@hdfgroup.org. |
||||
dnl |
||||
dnl Macros for HDF5 Fortran |
||||
dnl |
||||
dnl ------------------------------------------------------------------------- |
||||
dnl ------------------------------------------------------------------------- |
||||
|
||||
dnl ------------------------------------------------------------------------- |
||||
dnl _AC_SYS_LARGEFILE_MACRO_VALUE |
||||
dnl |
||||
dnl The following macro overrides the autoconf macro of the same name |
||||
dnl with this custom definition. This macro performs the same checks as |
||||
dnl autoconf's native _AC_SYS_LARGEFILE_MACRO_VALUE, but will also set |
||||
dnl AM_CPPFLAGS with the appropriate -D defines so additional configure |
||||
dnl sizeof checks do not fail. |
||||
dnl |
||||
# _AC_SYS_LARGEFILE_MACRO_VALUE(C-MACRO, VALUE, |
||||
# CACHE-VAR, |
||||
# DESCRIPTION, |
||||
# PROLOGUE, [FUNCTION-BODY]) |
||||
# ---------------------------------------------------------- |
||||
m4_define([_AC_SYS_LARGEFILE_MACRO_VALUE], |
||||
[AC_CACHE_CHECK([for $1 value needed for large files], [$3], |
||||
[while :; do |
||||
m4_ifval([$6], [AC_LINK_IFELSE], [AC_COMPILE_IFELSE])( |
||||
[AC_LANG_PROGRAM([$5], [$6])], |
||||
[$3=no; break]) |
||||
m4_ifval([$6], [AC_LINK_IFELSE], [AC_COMPILE_IFELSE])( |
||||
[AC_LANG_PROGRAM([@%:@define $1 $2 |
||||
$5], [$6])], |
||||
[$3=$2; break]) |
||||
$3=unknown |
||||
break |
||||
done]) |
||||
case $$3 in #( |
||||
no | unknown) ;; |
||||
*) AC_DEFINE_UNQUOTED([$1], [$$3], [$4]) |
||||
AM_CPPFLAGS="-D$1=$$3 $AM_CPPFLAGS";; |
||||
esac |
||||
rm -rf conftest*[]dnl |
||||
])# _AC_SYS_LARGEFILE_MACRO_VALUE |
||||
|
||||
@ -0,0 +1,254 @@ |
||||
#!/bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# A script to reconfigure autotools for HDF5, and to recreate other |
||||
# generated files specific to HDF5. |
||||
# |
||||
# IMPORTANT OS X NOTE |
||||
# |
||||
# If you are using OS X, you will probably not have the autotools |
||||
# installed, even if you have the Xcode command-line tools. |
||||
# |
||||
# The easiest way to fix this is to install everything via Homebrew: |
||||
# |
||||
# http://brew.sh/ |
||||
# |
||||
# After you install the base packages, install autoconf, automake, |
||||
# and libtool. |
||||
# |
||||
# brew install autoconf |
||||
# brew install automake |
||||
# brew install libtool |
||||
# |
||||
# This only takes a few minutes. Note that libtool and libtoolize will |
||||
# be glibtool and glibtoolize so as not to conflict with Apple's non-gnu |
||||
# tools. This autogen.sh script handles this for you. |
||||
# |
||||
# END IMPORTANT OS X NOTE |
||||
# |
||||
# If you want to use a particular version of the autotools, the paths |
||||
# to each tool can be overridden using the following environment |
||||
# variables: |
||||
# |
||||
# HDF5_ACLOCAL |
||||
# HDF5_AUTOHEADER |
||||
# HDF5_AUTOMAKE |
||||
# HDF5_AUTOCONF |
||||
# HDF5_LIBTOOL |
||||
# HDF5_M4 |
||||
# |
||||
# Note that aclocal will attempt to include libtool's share/aclocal |
||||
# directory. |
||||
# |
||||
# Aside from -h for help, this script takes one potential option: |
||||
# |
||||
# -v |
||||
# |
||||
# This emits some extra information, mainly tool versions. |
||||
|
||||
echo |
||||
echo "**************************" |
||||
echo "* HDF5 autogen.sh script *" |
||||
echo "**************************" |
||||
echo |
||||
|
||||
# Default is not verbose output |
||||
verbose=false |
||||
|
||||
optspec=":hpv-" |
||||
while getopts "$optspec" optchar; do |
||||
case "${optchar}" in |
||||
h) |
||||
echo "usage: $0 [OPTIONS]" |
||||
echo |
||||
echo " -h Print this help message." |
||||
echo |
||||
echo " -v Show more verbose output." |
||||
echo |
||||
echo " NOTE: Each tool can be set via an environment variable." |
||||
echo " These are documented inside this autogen.sh script." |
||||
echo |
||||
exit 0 |
||||
;; |
||||
v) |
||||
echo "Setting verbosity: high" |
||||
echo |
||||
verbose=true |
||||
;; |
||||
*) |
||||
if [ "$OPTERR" != 1 ] || case $optspec in :*) ;; *) false; esac; then |
||||
echo "ERROR: non-option argument: '-${OPTARG}'" >&2 |
||||
echo "Quitting" |
||||
exit 1 |
||||
fi |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# If paths to autotools are not specified, use whatever the system |
||||
# has installed as the default. We use 'command -v <tool>' to |
||||
# show exactly what's being used (shellcheck complains that 'which' |
||||
# is non-standard and deprecated). |
||||
if test -z "${HDF5_AUTOCONF}"; then |
||||
HDF5_AUTOCONF="$(command -v autoconf)" |
||||
fi |
||||
if test -z "${HDF5_AUTOMAKE}"; then |
||||
HDF5_AUTOMAKE="$(command -v automake)" |
||||
fi |
||||
if test -z "${HDF5_AUTOHEADER}"; then |
||||
HDF5_AUTOHEADER="$(command -v autoheader)" |
||||
fi |
||||
if test -z "${HDF5_ACLOCAL}"; then |
||||
HDF5_ACLOCAL="$(command -v aclocal)" |
||||
fi |
||||
if test -z "${HDF5_LIBTOOL}"; then |
||||
case "$(uname)" in |
||||
Darwin*) |
||||
# libtool on OS-X is non-gnu |
||||
HDF5_LIBTOOL="$(command -v glibtool)" |
||||
;; |
||||
*) |
||||
HDF5_LIBTOOL="$(command -v libtool)" |
||||
;; |
||||
esac |
||||
fi |
||||
if test -z "${HDF5_M4}"; then |
||||
HDF5_M4="$(command -v m4)" |
||||
fi |
||||
|
||||
|
||||
# Make sure that these versions of the autotools are in the path |
||||
AUTOCONF_DIR=$(dirname "${HDF5_AUTOCONF}") |
||||
LIBTOOL_DIR=$(dirname "${HDF5_LIBTOOL}") |
||||
M4_DIR=$(dirname "${HDF5_M4}") |
||||
PATH=${AUTOCONF_DIR}:${LIBTOOL_DIR}:${M4_DIR}:$PATH |
||||
|
||||
# Make libtoolize match the specified libtool |
||||
case "$(uname)" in |
||||
Darwin*) |
||||
# On OS X, libtoolize could be named glibtoolize or |
||||
# libtoolize. Try the former first, then fall back |
||||
# to the latter if it's not found. |
||||
HDF5_LIBTOOLIZE="${LIBTOOL_DIR}/glibtoolize" |
||||
if [ ! -f "$HDF5_LIBTOOLIZE" ] ; then |
||||
HDF5_LIBTOOLIZE="${LIBTOOL_DIR}/libtoolize" |
||||
fi |
||||
;; |
||||
*) |
||||
HDF5_LIBTOOLIZE="${LIBTOOL_DIR}/libtoolize" |
||||
;; |
||||
esac |
||||
|
||||
# Run scripts that process source. |
||||
# |
||||
# These should be run before the autotools so that failures here block |
||||
# compilation. |
||||
|
||||
# Run trace script |
||||
# The trace script adds H5TRACE macros to library source files. It should |
||||
# have no effect on files that don't have HDF5 API macros in them. |
||||
echo "Running trace script:" |
||||
bin/trace src/H5*.c || exit 1 |
||||
echo |
||||
|
||||
# Run make_err |
||||
# make_err automatically generates the H5E headers that create error message |
||||
# types for HDF5. |
||||
echo "Running error generation script:" |
||||
bin/make_err src/H5err.txt || exit 1 |
||||
echo |
||||
|
||||
# Run make_vers |
||||
# make_vers automatically generates the public headers that define the API version |
||||
# macros for HDF5. |
||||
echo "Running API version generation script:" |
||||
bin/make_vers src/H5vers.txt || exit 1 |
||||
echo |
||||
|
||||
# Run make_overflow |
||||
# make_overflow automatically generates macros for detecting overflows for type |
||||
# conversion. |
||||
echo "Running overflow macro generation script:" |
||||
bin/make_overflow src/H5overflow.txt || exit 1 |
||||
echo |
||||
|
||||
# Run autotools in order |
||||
# |
||||
# When available, we use the --force option to ensure all files are |
||||
# updated. This prevents the autotools from re-running to fix dependencies |
||||
# during the 'make' step, which can be a problem if environment variables |
||||
# were set on the command line during autogen invocation. |
||||
|
||||
# Some versions of libtoolize will suggest that we add ACLOCAL_AMFLAGS |
||||
# = '-I m4'. This is already done in commence.am, which is included |
||||
# in Makefile.am. You can ignore this suggestion. |
||||
|
||||
# LIBTOOLIZE |
||||
libtoolize_cmd="${HDF5_LIBTOOLIZE} --copy --force" |
||||
echo "${libtoolize_cmd}" |
||||
if [ "$verbose" = true ] ; then |
||||
${HDF5_LIBTOOLIZE} --version |
||||
fi |
||||
${libtoolize_cmd} || exit 1 |
||||
echo |
||||
echo "NOTE: You can ignore the warning about adding -I m4." |
||||
echo " We already do this in an included file." |
||||
echo |
||||
|
||||
# ACLOCAL |
||||
if test -e "${LIBTOOL_DIR}/../share/aclocal" ; then |
||||
aclocal_include="-I ${LIBTOOL_DIR}/../share/aclocal" |
||||
fi |
||||
aclocal_cmd="${HDF5_ACLOCAL} --force -I m4 ${aclocal_include}" |
||||
echo "${aclocal_cmd}" |
||||
if [ "$verbose" = true ] ; then |
||||
${HDF5_ACLOCAL} --version |
||||
fi |
||||
${aclocal_cmd} || exit 1 |
||||
echo |
||||
|
||||
# AUTOHEADER |
||||
autoheader_cmd="${HDF5_AUTOHEADER} --force" |
||||
echo "${autoheader_cmd}" |
||||
if [ "$verbose" = true ] ; then |
||||
${HDF5_AUTOHEADER} --version |
||||
fi |
||||
${autoheader_cmd} || exit 1 |
||||
echo |
||||
|
||||
# AUTOMAKE |
||||
automake_cmd="${HDF5_AUTOMAKE} --copy --add-missing --force-missing" |
||||
echo "${automake_cmd}" |
||||
if [ "$verbose" = true ] ; then |
||||
${HDF5_AUTOMAKE} --version |
||||
fi |
||||
${automake_cmd} || exit 1 |
||||
echo |
||||
|
||||
# AUTOCONF |
||||
# The "obsolete" warnings category flags our Java macros as obsolete. |
||||
# Since there is no clear way to upgrade them (Java support in the Autotools |
||||
# is not great) and they work well enough for now, we suppress those warnings. |
||||
autoconf_cmd="${HDF5_AUTOCONF} --force --warnings=no-obsolete" |
||||
echo "${autoconf_cmd}" |
||||
if [ "$verbose" = true ] ; then |
||||
${HDF5_AUTOCONF} --version |
||||
fi |
||||
${autoconf_cmd} || exit 1 |
||||
echo |
||||
|
||||
echo "*** SUCCESS ***" |
||||
|
||||
echo |
||||
exit 0 |
||||
|
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,56 @@ |
||||
#
|
||||
# Copyright by The HDF Group.
|
||||
# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF5. The full HDF5 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the COPYING file, which can be found at the root of the source code
|
||||
# distribution tree, or in https://www.hdfgroup.org/licenses.
|
||||
# If you do not have access to either file, you may request a copy from
|
||||
# help@hdfgroup.org.
|
||||
##
|
||||
## Makefile.am
|
||||
## Run automake to generate a Makefile.in from this file.
|
||||
#
|
||||
# HDF5 Library Makefile(.in)
|
||||
#
|
||||
|
||||
include $(top_srcdir)/config/commence.am |
||||
|
||||
# Include src directory
|
||||
AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/tools/lib
|
||||
|
||||
# These are our main targets
|
||||
bin_SCRIPTS=h5redeploy
|
||||
|
||||
# Tell automake to clean h5redeploy script
|
||||
CLEANFILES=h5redeploy
|
||||
|
||||
# These were generated by configure. Remove them only when distclean.
|
||||
DISTCLEANFILES=h5cc
|
||||
|
||||
# All programs rely on hdf5 library and h5tools library
|
||||
LDADD=$(LIBH5TOOLS) $(LIBHDF5)
|
||||
|
||||
# How to build h5redeploy script
|
||||
h5redeploy: h5redeploy.in |
||||
@cp $(srcdir)/$@.in $@
|
||||
|
||||
# h5cc needs custom install and uninstall rules, since it may be
|
||||
# named h5pcc if hdf5 is being built in parallel mode.
|
||||
if BUILD_PARALLEL_CONDITIONAL |
||||
H5CC_NAME=h5pcc
|
||||
else |
||||
H5CC_NAME=h5cc
|
||||
endif |
||||
|
||||
$(DESTDIR)$(bindir): |
||||
echo " $(MKDIR_P) '$(DESTDIR)$(bindir)'"; \
|
||||
$(MKDIR_P) "$(DESTDIR)$(bindir)" || exit 1;
|
||||
|
||||
install-exec-local: $(DESTDIR)$(bindir) |
||||
@$(INSTALL) h5cc $(DESTDIR)$(bindir)/$(H5CC_NAME)
|
||||
uninstall-local: |
||||
@$(RM) $(DESTDIR)$(bindir)/$(H5CC_NAME)
|
||||
|
||||
include $(top_srcdir)/config/conclude.am |
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,31 @@ |
||||
# Scripts in `bin` and their purpose |
||||
|
||||
Programs run via `autogen.sh` (or the equivalent in CMake) are indicated. |
||||
|
||||
|Program|Purpose| |
||||
|-------|-------| |
||||
|`buildhdf5`|Convenience script to build HDF5 using the Autotools| |
||||
|`checkapi`|Checks if public API calls are used in internal functions| |
||||
|`checkposix`|Checks if C/POSIX calls are prefixed with `HD`| |
||||
|`chkcopyright`|Checks if files have appropriate copyright statements| |
||||
|`cmakehdf5`|Convenience script to build HDF5 using CMake| |
||||
|`debug-ohdr`|Examines debug output from `H5O_open/close` to look for open objects| |
||||
|`format_source`|Runs `clang-format` over the source files, applying our rules| |
||||
|`genparser`|Creates the flex/bison-based parser files in the high-level library| |
||||
|`h5cc.in`|Input file from which h5cc is created| |
||||
|`h5redeploy.in`|Input file from which h5redeploy is created| |
||||
|`h5vers`|Updates the library version number| |
||||
|`make_err`|Generates the H5E header files (called in `autogen.sh`)| |
||||
|`make_vers`|Generates H5version.h (called in `autogen.sh`)| |
||||
|`make_overflow`|Generates H5overflow.h (called in `autogen.sh`)| |
||||
|`output_filter`|Used in the tools test code to strip extraneous output before we diff files| |
||||
|`restore.sh`|Removes files generated by `autogen.sh`| |
||||
|`runbkprog`|Used by CMake to run test programs in the background| |
||||
|`switch_maint_mode`|Switches maintainer mode on/off in `configure.ac`| |
||||
|`trace`|Adds `TRACE` macros to HDF5 C library source files (run by `autogen.sh`)| |
||||
|`warnhist`|Generates compiler warning statistics for gcc/clang when fed output of make| |
||||
|
||||
## TODO |
||||
|
||||
* chkcopyright is currently semi-broken as it doesn't handle the full variety of copyright headers we need. We're leaving it in place, though, in the hopes that someone will update it in the future. |
||||
* Extending warnhist to better understand the output of additional compilers/languages would be nice. |
||||
@ -0,0 +1,23 @@ |
||||
#!/bin/bash -l |
||||
if [ $# -gt 0 ]; then |
||||
SUMMARY_FILE=$1 |
||||
fi |
||||
ACCOUNT_ID=@ACCOUNT_ID@ |
||||
|
||||
echo "Run parallel test command. Test output will be in build/${SUMMARY_FILE}" |
||||
CTEST_CMD=`which ctest` |
||||
|
||||
#SKIPTESTS <<KEYWORD:script inserts list of skips tests here -- don't remove>> |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
if [[ $SUMMARY_FILE == *"ctestS"* ]]; then |
||||
CMD="${CTEST_CMD} -S ctest_serial.cmake" |
||||
qsub -t 60 -n 1 -q debug-flat-quad -A ${ACCOUNT_ID} ${CMD} >& ${SUMMARY_FILE} |
||||
echo "Done running ctest serial command." |
||||
touch ctestS.done |
||||
else |
||||
CMD="${CTEST_CMD} -S ctest_parallel.cmake" |
||||
qsub -t 60 -n 1 -q debug-flat-quad -A ${ACCOUNT_ID} ${CMD} >& ${SUMMARY_FILE} |
||||
echo "Done running ctest parallel command." |
||||
touch ctestP.done |
||||
fi |
||||
@ -0,0 +1,20 @@ |
||||
#!/bin/tcsh |
||||
### LSF syntax |
||||
#BSUB -nnodes 1 #number of nodes |
||||
#BSUB -W 30 #walltime in minutes |
||||
#BSUB -G guests #account |
||||
#BSUB -e ctestPerrors.txt #stderr |
||||
#BSUB -o ctestPoutput.txt #stdout |
||||
#BSUB -J hdf5_ctestP #job |
||||
##BSUB -q pbatch #queue to use |
||||
#BSUB -q pdebug |
||||
|
||||
##date; hostname |
||||
##echo -n 'JobID is '; echo $LSB_JOBID |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run parallel test command. Test output will be in build/ctestP.out" |
||||
ctest -S ctest_parallel.cmake >& ctestP.out |
||||
|
||||
echo "Done running ctest parallel command." |
||||
touch ctestP.done |
||||
@ -0,0 +1,15 @@ |
||||
#!/bin/bash |
||||
|
||||
#SBATCH --nodes=1 |
||||
#SBATCH -t 00:30:00 |
||||
#SBATCH --mail-type=BEGIN,END,FAIL |
||||
##SBATCH --mail-user=<username>@sandia.gov |
||||
#SBATCH --export=ALL |
||||
#SBATCH --job-name=h5_ctestP |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run parallel test command. Test output will be in build/ctestP.out" |
||||
ctest -S ctest_parallel.cmake >& ctestP.out |
||||
|
||||
echo "Done running ctest parallel command." |
||||
touch ctestP.done |
||||
@ -0,0 +1,17 @@ |
||||
#!/bin/tcsh |
||||
### LSF syntax |
||||
#BSUB -nnodes 1 #number of nodes |
||||
#BSUB -W 29 #walltime in minutes |
||||
#BSUB -G guests #account |
||||
#BSUB -e ctestSerrors.txt #stderr |
||||
#BSUB -o ctestSoutput.txt #stdout |
||||
#BSUB -J hdf5_ctestS #job |
||||
##BSUB -q pbatch #queue to use |
||||
#BSUB -q pdebug |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run command. Test output will be in build/ctestS.out" |
||||
ctest -S ctest_serial.cmake >& ctestS.out |
||||
|
||||
echo "Done running command." |
||||
touch ctestS.done |
||||
@ -0,0 +1,15 @@ |
||||
#!/bin/bash |
||||
|
||||
#SBATCH --nodes=1 |
||||
#SBATCH -t 00:30:00 |
||||
#SBATCH --mail-type=BEGIN,END,FAIL |
||||
##SBATCH --mail-user=<username>@sandia.gov |
||||
#SBATCH --export=ALL |
||||
#SBATCH --job-name=h5_ctestS |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run command. Test output will be in build/ctestS.out" |
||||
ctest -S ctest_serial.cmake >& ctestS.out |
||||
|
||||
echo "Done running command." |
||||
touch ctestS.done |
||||
@ -0,0 +1,12 @@ |
||||
if(NOT "$ENV{CI_SITE_NAME}" STREQUAL "") |
||||
set(CTEST_SITE "$ENV{CI_SITE_NAME}") |
||||
endif() |
||||
if(NOT "$ENV{CI_BUILD_NAME}" STREQUAL "") |
||||
set(CTEST_BUILD_NAME "$ENV{CI_BUILD_NAME}") |
||||
endif() |
||||
|
||||
ctest_start ("$ENV{CI_MODEL}" "@HDF5_SOURCE_DIR@" "@HDF5_BINARY_DIR@" APPEND) |
||||
ctest_test (BUILD "@HDF5_BINARY_DIR@" APPEND INCLUDE MPI_TEST_ RETURN_VALUE res) |
||||
if (${res} LESS 0 OR ${res} GREATER 0) |
||||
file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed Tests: ${res}\n") |
||||
endif () |
||||
@ -0,0 +1,12 @@ |
||||
if(NOT "$ENV{CI_SITE_NAME}" STREQUAL "") |
||||
set(CTEST_SITE "$ENV{CI_SITE_NAME}") |
||||
endif() |
||||
if(NOT "$ENV{CI_BUILD_NAME}" STREQUAL "") |
||||
set(CTEST_BUILD_NAME "$ENV{CI_BUILD_NAME}") |
||||
endif() |
||||
|
||||
ctest_start ("$ENV{CI_MODEL}" "@HDF5_SOURCE_DIR@" "@HDF5_BINARY_DIR@" APPEND) |
||||
ctest_test (BUILD "@HDF5_BINARY_DIR@" APPEND EXCLUDE MPI_TEST_ PARALLEL_LEVEL 32 RETURN_VALUE res) |
||||
if (${res} LESS 0 OR ${res} GREATER 0) |
||||
file (APPEND ${CTEST_SCRIPT_DIRECTORY}/FailedCTest.txt "Failed Tests: ${res}\n") |
||||
endif () |
||||
@ -0,0 +1,20 @@ |
||||
#!/bin/bash |
||||
|
||||
#SBATCH -p knl -C quad |
||||
#SBATCH --nodes=1 |
||||
#SBATCH -t 00:10:00 |
||||
#SBATCH --mail-type=BEGIN,END,FAIL |
||||
#SBATCH --mail-user=<username>@sandia.gov |
||||
#SBATCH --export=ALL |
||||
#SBATCH --job-name=knl_h5detect |
||||
|
||||
|
||||
# Inputs: Build directory, output file name, executable file name (username/email if available). |
||||
PROGNAME=H5detect |
||||
OUTPUT=H5Tinit.c |
||||
|
||||
CMD="@HDF5_BINARY_DIR@/bin/${PROGNAME} @HDF5_GENERATED_SOURCE_DIR@/${OUTPUT}" |
||||
echo "Run $CMD" |
||||
srun -n 1 $CMD |
||||
echo "Done running $CMD" |
||||
|
||||
@ -0,0 +1,16 @@ |
||||
#!/bin/bash |
||||
|
||||
#SBATCH -p knl -C quad,cache |
||||
#SBATCH --nodes=1 |
||||
#SBATCH -t 00:30:00 |
||||
#SBATCH --mail-type=BEGIN,END,FAIL |
||||
##SBATCH --mail-user=<username>@sandia.gov |
||||
#SBATCH --export=ALL |
||||
#SBATCH --job-name=h5_ctestP |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run parallel test command. Test output will be in build/ctestP.out" |
||||
ctest -S ctest_parallel.cmake >& ctestP.out |
||||
|
||||
echo "Done running ctest parallel command." |
||||
touch ctestP.done |
||||
@ -0,0 +1,16 @@ |
||||
#!/bin/bash |
||||
|
||||
#SBATCH -p knl -C quad,cache |
||||
#SBATCH --nodes=1 |
||||
#SBATCH -t 00:30:00 |
||||
#SBATCH --mail-type=BEGIN,END,FAIL |
||||
##SBATCH --mail-user=<username>@sandia.gov |
||||
#SBATCH --export=ALL |
||||
#SBATCH --job-name=h5_ctestS |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run command. Test output will be in build/ctestS.out" |
||||
ctest -S ctest_serial.cmake >& ctestS.out |
||||
|
||||
echo "Done running command." |
||||
touch ctestS.done |
||||
@ -0,0 +1,22 @@ |
||||
#!/bin/tcsh |
||||
### LSF syntax |
||||
#BSUB -n 6 #number of nodes |
||||
#BSUB -R "span[ptile=6]" |
||||
#BSUB -W 30 #walltime in minutes |
||||
#BSUB -G guests #account |
||||
#BSUB -e ctestPerrors.txt #stderr |
||||
#BSUB -o ctestPoutput.txt #stdout |
||||
#BSUB -J hdf5_ctestP #job |
||||
##BSUB -q pbatch #queue to use |
||||
#BSUB -q pdebug |
||||
|
||||
##date; hostname |
||||
##echo -n 'JobID is '; echo $LSB_JOBID |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run parallel test command. Test output will be in build/ctestP.out" |
||||
ctest -S ctest_parallel.cmake >& ctestP.out |
||||
|
||||
echo "Done running ctest parallel command." |
||||
touch ctestP.done |
||||
~ |
||||
@ -0,0 +1,17 @@ |
||||
#!/bin/tcsh |
||||
### LSF syntax |
||||
#BSUB -n 1 #number of nodes |
||||
#BSUB -W 29 #walltime in minutes |
||||
#BSUB -G guests #account |
||||
#BSUB -e ctestSerrors.txt #stderr |
||||
#BSUB -o ctestSoutput.txt #stdout |
||||
#BSUB -J hdf5_ctestS #job |
||||
##BSUB -q pbatch #queue to use |
||||
#BSUB -q pdebug |
||||
|
||||
cd @HDF5_BINARY_DIR@ |
||||
echo "Run command. Test output will be in build/ctestS.out" |
||||
ctest -S ctest_serial.cmake >& ctestS.out |
||||
|
||||
echo "Done running command." |
||||
touch ctestS.done |
||||
@ -0,0 +1,7 @@ |
||||
#!/bin/tcsh |
||||
|
||||
# ray.llnl.gov requires a '<' with bsub for submitting .lsf batch jobs. |
||||
# CMake is reluctant to pass the '<', so we put it in this script and use |
||||
# the script to submit the bsub command on ray. |
||||
|
||||
bsub < $1 |
||||
@ -0,0 +1,339 @@ |
||||
#!/bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# Make a release of hdf5. |
||||
# |
||||
# NOTE: |
||||
# This script differs from bin/release in that this has an added |
||||
# --revision option to create private releases with the code revision |
||||
# hash in the version strings. |
||||
# |
||||
# This script can probably be merged into the original release script in |
||||
# the future. |
||||
|
||||
# Function definitions |
||||
# |
||||
# Print Usage page |
||||
USAGE() |
||||
{ |
||||
cat << EOF |
||||
Usage: $0 -d <dir> [-h] [--private] [--revision [--branch BRANCHNAME]] <methods> ... |
||||
-d DIR The name of the directory where the release(s) should be |
||||
placed. |
||||
--branch BRANCHNAME This is to get the correct version of the branch name from the |
||||
repository. BRANCHNAME for v1.8 should be hdf5_1_8. |
||||
-h print the help page. |
||||
--private Make a private release with today's date in version information. |
||||
--revision Make a private release with the code revision number in version information. |
||||
This allows --branch to be used for the file name. |
||||
--branch BRANCHNAME This is to get the correct version of the branch name from the |
||||
repository. BRANCHNAME for v1.8 should be hdf5_1_8. |
||||
|
||||
This must be run at the top level of the source directory. |
||||
The other command-line options are the names of the programs to use |
||||
for compressing the resulting tar archive (if none are given then |
||||
"tar" is assumed): |
||||
|
||||
tar -- use tar and don't do any compressing. |
||||
gzip -- use gzip with "-9" and append ".gz" to the output name. |
||||
bzip2 -- use bzip2 with "-9" and append ".bz2" to the output name. |
||||
zip -- convert all text files to DOS style and form a zip file for Windows use. |
||||
|
||||
An md5 checksum is produced for each archive created and stored in the md5 file. |
||||
|
||||
Examples: |
||||
|
||||
$ bin/release -d /tmp |
||||
/tmp/hdf5-1.8.13-RELEASE.txt |
||||
/tmp/hdf5-1.8.13.md5 |
||||
/tmp/hdf5-1.8.13.tar |
||||
|
||||
$ bin/release -d /tmp gzip |
||||
/tmp/hdf5-1.8.13-RELEASE.txt |
||||
/tmp/hdf5-1.8.13.md5 |
||||
/tmp/hdf5-1.8.13.tar.gz |
||||
|
||||
$ bin/release -d /tmp tar gzip zip |
||||
/tmp/hdf5-1.8.13-RELEASE.txt |
||||
/tmp/hdf5-1.8.13.md5 |
||||
/tmp/hdf5-1.8.13.tar |
||||
/tmp/hdf5-1.8.13.tar.gz |
||||
/tmp/hdf5-1.8.13.tar.zip |
||||
|
||||
EOF |
||||
|
||||
} |
||||
|
||||
# Function name: tar2zip |
||||
# Convert the release tarball to a Windows zipball. |
||||
# |
||||
# Steps: |
||||
# 1. untar the tarball in a temporary directory; |
||||
# Note: do this in a temporary directory to avoid changing |
||||
# the original source directory which may be around. |
||||
# 2. convert all its text files to DOS (LF-CR) style; |
||||
# 3. form a zip file which is usable by Windows users. |
||||
# |
||||
# Parameters: |
||||
# $1 version |
||||
# $2 release tarball |
||||
# $3 output zipball file name |
||||
# |
||||
# Returns 0 if successful; 1 otherwise |
||||
# |
||||
tar2zip() |
||||
{ |
||||
if [ $# -ne 3 ]; then |
||||
echo "usage: tar2zip <tarfilename> <zipfilename>" |
||||
return 1 |
||||
fi |
||||
ztmpdir=/tmp/tmpdir$$ |
||||
mkdir -p $ztmpdir |
||||
version=$1 |
||||
tarfile=$2 |
||||
zipfile=$3 |
||||
|
||||
# step 1: untar tarball in ztmpdir |
||||
(cd $ztmpdir; tar xf -) < $tarfile |
||||
# sanity check |
||||
if [ ! -d $ztmpdir/$version ]; then |
||||
echo "untar did not create $ztmpdir/$version source dir" |
||||
# cleanup |
||||
rm -rf $ztmpdir |
||||
return 1 |
||||
fi |
||||
# step 2: convert text files |
||||
# There maybe a simpler way to do this. |
||||
# options used in unix2dos: |
||||
# -k Keep the date stamp |
||||
# -q quiet mode |
||||
# grep redirect output to /dev/null because -q or -s are not portable. |
||||
find $ztmpdir/$version | \ |
||||
while read inf; do \ |
||||
if file $inf | grep "$inf\: .*text" > /dev/null 2>&1 ; then \ |
||||
unix2dos -q -k $inf; \ |
||||
fi\ |
||||
done |
||||
# step 3: make zipball |
||||
# -9 maximum compression |
||||
# -y Store symbolic links as such in the zip archive |
||||
# -r recursive |
||||
# -q quiet |
||||
(cd $ztmpdir; zip -9 -y -r -q $version.zip $version) |
||||
mv $ztmpdir/$version.zip $zipfile |
||||
|
||||
# cleanup |
||||
rm -rf $ztmpdir |
||||
} |
||||
|
||||
# This command must be run at the top level of the hdf5 source directory. |
||||
# Verify this requirement. |
||||
if [ ! \( -f configure.ac -a -f bin/bbrelease \) ]; then |
||||
echo "$0 must be run at the top level of the hdf5 source directory" |
||||
exit 1 |
||||
fi |
||||
|
||||
# Defaults |
||||
DEST=releases |
||||
VERS=`perl bin/h5vers` |
||||
VERS_OLD= |
||||
test "$VERS" || exit 1 |
||||
verbose=yes |
||||
release_date=`date +%F` |
||||
today=`date +%Y%m%d` |
||||
pmode='no' |
||||
revmode='no' |
||||
tmpdir="../#release_tmp.$$" # tmp work directory |
||||
CPPLUS_RM_NAME=cpplus_RM |
||||
|
||||
# Restore previous Version information |
||||
RESTORE_VERSION() |
||||
{ |
||||
if [ X-${VERS_OLD} != X- ]; then |
||||
echo restoring version information back to $VERS_OLD |
||||
rm -f config/lt_vers.am |
||||
cp $tmpdir/lt_vers.am config/lt_vers.am |
||||
bin/h5vers -s $VERS_OLD |
||||
VERS_OLD= |
||||
fi |
||||
} |
||||
|
||||
|
||||
# Command-line arguments |
||||
while [ -n "$1" ]; do |
||||
arg=$1 |
||||
shift |
||||
case "$arg" in |
||||
-d) |
||||
DEST=$1 |
||||
shift |
||||
;; |
||||
-h) |
||||
USAGE |
||||
exit 0 |
||||
;; |
||||
--private) |
||||
pmode=yes |
||||
;; |
||||
--revision) |
||||
revmode=yes |
||||
;; |
||||
--branch) |
||||
BRANCHNAME=$1 |
||||
shift |
||||
;; |
||||
-*) |
||||
echo "Unknown switch: $arg" 1>&2 |
||||
USAGE |
||||
exit 1 |
||||
;; |
||||
*) |
||||
methods="$methods $arg" |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# Default method is tar |
||||
if [ "X$methods" = "X" ]; then |
||||
methods="tar" |
||||
fi |
||||
|
||||
# Create the temporary work directory. |
||||
if mkdir $tmpdir; then |
||||
echo "temporary work directory for release. "\ |
||||
"Can be deleted after release completes." > $tmpdir/README |
||||
else |
||||
echo "Failed to mkdir tmpdir($tmpdir)" |
||||
exit 1 |
||||
fi |
||||
|
||||
# setup restoration in case of abort. |
||||
trap RESTORE_VERSION 0 |
||||
|
||||
if [ X$pmode = Xyes ]; then |
||||
VERS_OLD=$VERS |
||||
# Copy old version of config/lt_vers.am, since it's hard to |
||||
# "undo" changes to it. |
||||
cp config/lt_vers.am $tmpdir |
||||
# Set version information to m.n.r-of$today. |
||||
# (h5vers does not correctly handle just m.n.r-$today.) |
||||
VERS=`echo $VERS | sed -e s/-.*//`-of$today |
||||
echo Private release of $VERS |
||||
bin/h5vers -s $VERS |
||||
fi |
||||
|
||||
if [ X$revmode = Xyes ]; then |
||||
VERS_OLD=$VERS |
||||
echo "Save old version $VERS_OLD for restoration later." |
||||
# Copy old version of config/lt_vers.am, since it's hard to |
||||
# "undo" changes to it. |
||||
cp config/lt_vers.am $tmpdir |
||||
if [ "${BRANCHNAME}" = "" ]; then |
||||
BRANCHNAME=`git symbolic-ref -q --short HEAD` |
||||
fi |
||||
revision=`git rev-parse --short HEAD` |
||||
# Set version information to m.n.r-r$revision. |
||||
# (h5vers does not correctly handle just m.n.r-$today.) |
||||
VERS=`echo $VERS | sed -e s/-.*//`-$revision |
||||
echo Private release of $VERS |
||||
HDF5_VERS=hdf5-$BRANCHNAME-$revision |
||||
echo file base of $HDF5_VERS |
||||
bin/h5vers -s $VERS |
||||
# use a generic directory name for revision releases |
||||
HDF5_IN_VERS=hdfsrc |
||||
else |
||||
# Store hdf5-$VERS ("hdf5-1.7.51", e.g.) to a variable to avoid typos |
||||
HDF5_VERS=hdf5-$VERS |
||||
# directory name matches tar file name for non-revision releases |
||||
HDF5_IN_VERS=$HDF5_VERS |
||||
fi |
||||
|
||||
test "$verbose" && echo "Releasing $HDF5_VERS to $DEST" 1>&2 |
||||
if [ ! -d $DEST ]; then |
||||
echo " Destination directory $DEST does not exist" 1>&2 |
||||
exit 1 |
||||
fi |
||||
|
||||
# Create a symlink to the source so files in the tarball have the prefix |
||||
# we want (gnu's --transform isn't portable) |
||||
ln -s `pwd` $tmpdir/$HDF5_IN_VERS || exit 1 |
||||
|
||||
# Save a backup copy of Makefile if exists. |
||||
test -f Makefile && mv Makefile $tmpdir/Makefile.x |
||||
cp -p Makefile.dist Makefile |
||||
|
||||
# Update README.md and release_docs/RELEASE.txt with release information in |
||||
# line 1. |
||||
for f in README.md release_docs/RELEASE.txt; do |
||||
echo "HDF5 version $VERS released on $release_date" >$f.x |
||||
sed -e 1d $f >>$f.x |
||||
mv $f.x $f |
||||
# Make sure new files are of the right access mode |
||||
chmod 644 $f |
||||
done |
||||
|
||||
# Create the tar file |
||||
test "$verbose" && echo " Running tar..." 1>&2 |
||||
(cd "$tmpdir" && exec tar -ch --exclude-vcs -f "$HDF5_VERS.tar" "./$HDF5_IN_VERS" || exit 1 ) |
||||
|
||||
# Compress |
||||
MD5file=$HDF5_VERS.md5 |
||||
cp /dev/null $DEST/$MD5file |
||||
for comp in $methods; do |
||||
case $comp in |
||||
tar) |
||||
cp -p $tmpdir/$HDF5_VERS.tar $DEST/$HDF5_VERS.tar |
||||
(cd $DEST; md5sum $HDF5_VERS.tar >> $MD5file) |
||||
;; |
||||
gzip) |
||||
test "$verbose" && echo " Running gzip..." 1>&2 |
||||
gzip -9 <$tmpdir/$HDF5_VERS.tar >$DEST/$HDF5_VERS.tar.gz |
||||
(cd $DEST; md5sum $HDF5_VERS.tar.gz >> $MD5file) |
||||
;; |
||||
bzip2) |
||||
test "$verbose" && echo " Running bzip2..." 1>&2 |
||||
bzip2 -9 <$tmpdir/$HDF5_VERS.tar >$DEST/$HDF5_VERS.tar.bz2 |
||||
(cd $DEST; md5sum $HDF5_VERS.tar.bz2 >> $MD5file) |
||||
;; |
||||
zip) |
||||
test "$verbose" && echo " Creating zip ball..." 1>&2 |
||||
tar2zip $HDF5_IN_VERS $tmpdir/$HDF5_VERS.tar $DEST/$HDF5_VERS.zip 1>&2 |
||||
(cd $DEST; md5sum $HDF5_VERS.zip >> $MD5file) |
||||
;; |
||||
*) |
||||
echo "***Error*** Unknown method $comp" |
||||
exit 1 |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# Copy the RELEASE.txt to the release area. |
||||
cp release_docs/RELEASE.txt $DEST/$HDF5_VERS-RELEASE.txt |
||||
|
||||
# Remove distributed Makefile and restore previous Makefile if existed. |
||||
rm -f Makefile |
||||
test -f $tmpdir/Makefile.x && mv $tmpdir/Makefile.x Makefile |
||||
|
||||
# Restore OLD version information, then no need for trap. |
||||
if [ X$pmode = Xyes ] || [ X$revmode = Xyes ]; then |
||||
echo "Restore the original version $VERS_OLD" |
||||
RESTORE_VERSION |
||||
trap 0 |
||||
fi |
||||
|
||||
# Remove temporary things |
||||
rm -rf $tmpdir |
||||
|
||||
echo "DONE" |
||||
|
||||
exit 0 |
||||
@ -0,0 +1,308 @@ |
||||
#!/bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
# Build HDF5 library by doing configure, make, and tests. |
||||
# Usage: See USAGE() |
||||
# Programmer: Albert Cheng |
||||
# Creation date: Jul 9, 2003 |
||||
|
||||
# Some handy definitions |
||||
USAGE() |
||||
{ |
||||
cat <<EOF |
||||
Buildhdf5 builds the HDF5 library by running configure, make and make check. |
||||
It skips the configure part if one has been done already. In effect, one |
||||
can continue from a previous build. |
||||
|
||||
Command Syntax |
||||
============== |
||||
buildhdf5 [-config] [-szlib] [-help] [-n] [-srcdir dir] [-fortran] [-cxx] [-pp] config-arguments ... |
||||
-config: run configure only. [default to do build too] |
||||
-szlib: configure in the szlib option |
||||
-help: show this help page |
||||
-n: no execution, just show commands |
||||
-srcdir: use dir as the source directory |
||||
[Note: this is different from --srcdir |
||||
which will be passed to configure] |
||||
-fortran: add --enable-fortran |
||||
-cxx: add --enable-cxx |
||||
-pp: add --enable-parallel |
||||
all other arguments are passed to configure |
||||
|
||||
|
||||
Configure in place or by srcdir |
||||
=============================== |
||||
By default, the command looks for the configure command in |
||||
'.' and then '../hdf5'. When it finds it, it uses it to do |
||||
the configure part. In effect, if ./configure is found, it |
||||
does the build in place. If it finds ../hdf5/configure, it |
||||
does the --srcdir (that is separated source) build. Therefore, |
||||
if you have the following structure setup, you can run multiple |
||||
hosts building simultantously using a common source code. |
||||
hdf5_v1.7/hdf5 # holds the source |
||||
.../sunbox # for SunOS |
||||
.../linux # for Linux |
||||
.../linuxpp # for Linux parallel |
||||
EOF |
||||
} |
||||
|
||||
|
||||
TIMESTAMP() |
||||
{ |
||||
echo "=====" "`date`" "=====" |
||||
} |
||||
|
||||
|
||||
QUIT() |
||||
{ |
||||
# print the closing time |
||||
TIMESTAMP |
||||
} |
||||
|
||||
|
||||
# Do one step bracketed with time stamps |
||||
# The '< /dev/null' is needed to prevent some applications like MPI |
||||
# jobs blocked for reading when they read stdin unnecessary. |
||||
STEP() |
||||
{ |
||||
banner="$1" |
||||
command="$2" |
||||
resultfile="$3" |
||||
|
||||
echo "$banner" |
||||
(TIMESTAMP; nerror=0 ; |
||||
echo "eval $command" |
||||
eval $command || nerror=1 ; |
||||
TIMESTAMP; exit $nerror) < /dev/null >> "$resultfile" 2>&1 |
||||
if [ $? -ne 0 ]; then |
||||
echo "error in '$banner'. buildhdf5 aborted." |
||||
exit 1 |
||||
fi |
||||
} |
||||
|
||||
|
||||
# Try locate the SZLIB. |
||||
# This is a hack because there is no consistent szlib pathname. |
||||
LOCATE_SZLIB() |
||||
{ |
||||
# Try to guess what domain I am in. |
||||
if [ -d /usr/hdf/bin ]; then |
||||
# I am in an THG host. |
||||
mydomain=thg |
||||
elif [ -d /afs/ncsa/projects/hdf/packages ]; then |
||||
# I am in an NCSA host that has AFS. |
||||
mydomain=ncsa |
||||
else |
||||
mydomain=unknown |
||||
fi |
||||
|
||||
case $mydomain in |
||||
thg) |
||||
# THG hosts |
||||
OS=`uname -s` |
||||
echo OS=$OS |
||||
case "$OS" in |
||||
Linux) |
||||
case `uname -m` in |
||||
i686) # 32 bits |
||||
szlibpaths="/home/packages/szip/static/encoder/Linux2.6-gcc" |
||||
;; |
||||
x86_64) # 64 bits |
||||
szlibpaths="/home/packages/szip/static/encoder/Linux2.6-x86_64-gcc" |
||||
;; |
||||
*) |
||||
# Don't know. Give a shot at standard places. |
||||
szlibpaths="/usr/hdf /usr/local" |
||||
;; |
||||
esac |
||||
;; |
||||
SunOS) |
||||
szlibpaths="/home/packages/szip/static/encoder/SunOS-5.10" |
||||
;; |
||||
FreeBSD) |
||||
case `uname -m` in |
||||
i386) # 32 bits |
||||
szlibpaths="/home/packages/szip/static/encoder/FreeBSD" |
||||
;; |
||||
amd64) # 64 bits |
||||
szlibpaths="/home/packages/szip/static/encoder/FreeBSD-64" |
||||
;; |
||||
*) |
||||
# Don't know. Give a shot at standard places. |
||||
szlibpaths="/usr/hdf /usr/local" |
||||
;; |
||||
esac |
||||
;; |
||||
*) |
||||
# Don't know. Give a shot at standard places. |
||||
szlibpaths="/usr/hdf /usr/local" |
||||
;; |
||||
esac |
||||
;; # end of case thg |
||||
ncsa) |
||||
# ncsa hosts |
||||
OS=`uname -s` |
||||
echo OS=$OS |
||||
case "$OS" in |
||||
HP-UX) |
||||
szlibpaths="/afs/ncsa/projects/hdf/packages/szip_new/HPUX-11.00" |
||||
;; |
||||
Linux) |
||||
case `uname -m` in |
||||
i686) |
||||
szlibpaths="/afs/ncsa/projects/hdf/packages/szip_new/Linux2.4" |
||||
;; |
||||
*) |
||||
# Don't know. Give a shot at standard places. |
||||
szlibpaths="/usr/ncsa /usr/sdt" |
||||
;; |
||||
esac |
||||
;; |
||||
SunOS) |
||||
szlibpaths="/afs/ncsa/projects/hdf/packages/szip_new/SunOS_5.8" |
||||
;; |
||||
*) |
||||
# Don't know. Give a shot at standard places. |
||||
szlibpaths="/usr/ncsa /usr/sdt" |
||||
;; |
||||
esac |
||||
;; # end of case ncsa |
||||
unknown) |
||||
# Unknown domain. Give a shot at the some standard places. |
||||
szlibpaths="/usr/local" |
||||
;; |
||||
esac # end of case $mydomain |
||||
|
||||
|
||||
|
||||
|
||||
|
||||
echo szlibpaths=$szlibpaths |
||||
for x in $szlibpaths dummy; do |
||||
if [ $x != dummy -a -f $x/include/szlib.h -a -f $x/lib/libsz.a ]; then |
||||
WITH_SZLIB="--with-szlib=$x" |
||||
break |
||||
fi |
||||
done |
||||
|
||||
echo WITH_SZLIB="$WITH_SZLIB" |
||||
} |
||||
|
||||
|
||||
# Configure. Default to do --srcdir. |
||||
CONFIG() |
||||
{ |
||||
CMD="$SRCDIR/configure $*" |
||||
echo $CMD |
||||
if [ "$NOEXEC" != 'noexec' ]; then |
||||
$CMD |
||||
else |
||||
true # set exit code as 0 |
||||
fi |
||||
} |
||||
|
||||
# Main body |
||||
TIMESTAMP |
||||
trap QUIT 0 |
||||
|
||||
# |
||||
# setup |
||||
# |
||||
MAKE=${MAKE:-'gmake'} |
||||
export MAKE |
||||
CONFIG_CMD="CONFIG" |
||||
CONFIG_OP= # configure options |
||||
CONFIG_ONLY=no # default is configure and build |
||||
NOEXEC= # default to execute commands |
||||
SRCDIRLIST=". ../hdf5" # places to look for configure |
||||
nerror=0 |
||||
|
||||
# parse some options |
||||
while [ $# -gt 0 ]; do |
||||
case "$1" in |
||||
-config) |
||||
# do configure only |
||||
CONFIG_ONLY=yes |
||||
;; |
||||
-szlib) |
||||
LOCATE_SZLIB |
||||
CONFIG_OP="$CONFIG_OP $WITH_SZLIB" |
||||
;; |
||||
-help) |
||||
USAGE |
||||
exit 0 |
||||
;; |
||||
-n) |
||||
NOEXEC='noexec' |
||||
;; |
||||
-srcdir) |
||||
shift |
||||
SRCDIRLIST="$1" |
||||
;; |
||||
-cxx) |
||||
CONFIG_OP="$CONFIG_OP --enable-cxx" |
||||
;; |
||||
-fortran) |
||||
CONFIG_OP="$CONFIG_OP --enable-fortran" |
||||
;; |
||||
-pp) |
||||
CONFIG_OP="$CONFIG_OP --enable-parallel" |
||||
;; |
||||
*) # pass it as a configure option |
||||
CONFIG_OP="$CONFIG_OP $1" |
||||
;; |
||||
esac |
||||
shift |
||||
done |
||||
|
||||
# Figure out if srcdir is wished. |
||||
# Make sure we are at the library root level |
||||
# by checking couple typical files. Not bullet-proof. |
||||
for SRCDIR in $SRCDIRLIST dummy; do |
||||
if [ x-$SRCDIR = x-dummy ]; then |
||||
break |
||||
fi |
||||
if [ -d $SRCDIR/src -a -d $SRCDIR/config -a -f $SRCDIR/configure ] |
||||
then |
||||
break |
||||
fi |
||||
done |
||||
|
||||
if [ x-$SRCDIR = x-dummy ]; then |
||||
echo "Could not find the source dir or configure script. Abort." |
||||
exit 1 |
||||
fi |
||||
|
||||
# Configure |
||||
# no configure if already done. |
||||
if [ ! -f config.status ]; then |
||||
STEP "Configure HDF5..." "$CONFIG_CMD $CONFIG_OP" "#config" |
||||
else |
||||
STEP "Configure Skipped" "echo Configure Skipped" "#config" |
||||
fi |
||||
|
||||
if [ x-$CONFIG_ONLY = x-yes ]; then |
||||
exit 0 |
||||
fi |
||||
|
||||
|
||||
# Compile |
||||
STEP "Make HDF5..." "$MAKE" "#make" |
||||
|
||||
# Serial tests |
||||
STEP "Testing HDF5 serial parts..." "$MAKE check-s" "#test-s" |
||||
|
||||
# Parallel tests |
||||
STEP "Testing HDF5 parallel parts..." "$MAKE check-p" "#test-p" |
||||
|
||||
# all done |
||||
echo "No Errors encountered" |
||||
@ -0,0 +1,66 @@ |
||||
#!/usr/bin/env perl |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
require 5.003; |
||||
|
||||
use warnings; |
||||
|
||||
# Purpose: insures that API functions aren't called internally. |
||||
# Usage: checkapi H5*.c |
||||
my $filename = ""; |
||||
my $lastname = ""; |
||||
|
||||
if(<>) { |
||||
while (<>) { |
||||
if($ARGV =~ /\//) { |
||||
($filename) = ($ARGV =~ /^.*\/([A-Za-z0-9_]*)\.c$/); |
||||
} else { |
||||
($filename) = ($ARGV =~ /([A-Za-z0-9_]*)\.c$/); |
||||
} |
||||
|
||||
if($filename =~ /H5FDmulti|H5FDstdio/) { |
||||
if($filename ne $lastname) { |
||||
print "$ARGV is exempt from checking\n"; |
||||
$lastname = $filename; |
||||
} |
||||
} else { |
||||
# Get rid of comments by removing the inside part. |
||||
s|/\*.*?\*/||g; |
||||
if ($in_comment) { |
||||
if (/\*\//) { |
||||
s|.*?\*/||; |
||||
$in_comment = 0; |
||||
} else { |
||||
$_="\n"; |
||||
} |
||||
} elsif (m|/\*|) { |
||||
s|/\*.*||; |
||||
$in_comment = 1; |
||||
} |
||||
|
||||
# Remove character strings |
||||
s/\\.//g; # remove escaped characters |
||||
s/\".*?\"//g; # remove string constants |
||||
|
||||
# Disregard the following hits |
||||
next if /^H5/; |
||||
next if /^\#/; |
||||
next if /FUNC_ENTER(_NOINIT)*/; |
||||
|
||||
next unless /(H5[A-Z]{1,2}[a-z]\w*)/; |
||||
print "$ARGV:$.: $1\n"; |
||||
} |
||||
} continue { |
||||
close ARGV if eof; # reset line number |
||||
} |
||||
} |
||||
|
||||
@ -0,0 +1,263 @@ |
||||
#!/usr/bin/env perl |
||||
require 5.003; |
||||
use warnings; |
||||
|
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
# Dana Robinson |
||||
# Spring 2019 |
||||
# (Original by Robb Matzke) |
||||
# |
||||
# Purpose: Given the names of C source files this script will print the |
||||
# file name, line number, and function name of any function that |
||||
# doesn't begin with the letter 'h' or 'H' as stipulated by the |
||||
# HDF5 programming style guide. |
||||
# |
||||
# Emacs users can run this script as the compile command and |
||||
# use 'next-error' (usually bound to M-`) to find each name |
||||
# violation. |
||||
|
||||
use File::Basename; |
||||
|
||||
# Loop over all files passed to the function |
||||
foreach $arg (@ARGV) { |
||||
|
||||
# Get the filename from the path |
||||
$filename = fileparse($arg); |
||||
|
||||
# Skip files that don't include H5private.h |
||||
# H5system. has to be inspected by hand since it wraps POSIX files |
||||
# |
||||
# H5detect and H5make_libsettings are created before the library exists |
||||
# so calls that link to function replacements won't work. We'll ignore |
||||
# it here. |
||||
# |
||||
# If a user specifies one file, process it no matter what so people |
||||
# can inspect files we normally skip (like H5system.c). |
||||
|
||||
$ignore = 0; |
||||
|
||||
# Ignored files in src/ |
||||
if($#ARGV gt 0 and $filename =~ /H5FDmulti|H5FDstdio|H5VLpassthru|H5system|H5detect|H5make_libsettings/) { |
||||
$ignore = 1; |
||||
} |
||||
# Ignored atomic test files in test/ |
||||
if($#ARGV gt 0 and $filename =~ /atomic_reader|atomic_writer/) { |
||||
$ignore = 1; |
||||
} |
||||
# Ignored filter plugins in test/ |
||||
if($#ARGV gt 0 and $filename =~ /^filter_plugin\d_/) { |
||||
$ignore = 1; |
||||
} |
||||
# Ignored generators in test/ |
||||
if($#ARGV gt 0 and $filename =~ /^gen_/) { |
||||
$ignore = 1; |
||||
} |
||||
|
||||
if($ignore) { |
||||
print "$filename is exempt from using Standard library macro wrappers\n"; |
||||
next; |
||||
} |
||||
|
||||
# Open the file |
||||
open(my $fh, "<", $arg) or do { |
||||
warn "NOTE: Unable to open $arg: !$\n"; |
||||
next; |
||||
}; |
||||
|
||||
# Loop over all lines in the file to find undecorated functions |
||||
while (<$fh>) { |
||||
|
||||
# Get rid of comments by removing the inside part. |
||||
s|/\*.*?\*/||g; |
||||
if ($in_comment) { |
||||
if (/\*\//) { |
||||
s|.*?\*/||; |
||||
$in_comment = 0; |
||||
} else { |
||||
$_="\n"; |
||||
} |
||||
} elsif (m|/\*|) { |
||||
s|/\*.*||; |
||||
$in_comment = 1; |
||||
} |
||||
|
||||
# Get rid of string constants if they begin and end on this line. |
||||
s/([\'\"])([^\1]|\\\1)*?\1/$1$1/g; |
||||
|
||||
# Get rid of preprocessor directives |
||||
s/^\#.*//; |
||||
|
||||
# Skip callbacks invoked as methods in a struct |
||||
next if $_ =~ /\b(\)?]?->|\.)\(?([a-z_A-Z]\w*)\s*\(/; |
||||
|
||||
# Now find all function calls on this line which don't start with 'H' |
||||
while (($name)=/\b([a-z_A-GI-Z]\w*)\s*\(/) { |
||||
$_ = $'; |
||||
|
||||
# Ignore C statements that look sort of like function |
||||
# calls. |
||||
next if $name =~ /^(if|for|offsetof|return|sizeof|switch|while|void)$/; |
||||
|
||||
# Ignore things that get misdetected because of the simplified |
||||
# parsing that takes place here. |
||||
next if $name =~ /^(int|herr_t|_term_interface|_term_package)$/; |
||||
|
||||
# These are really HDF5 functions/macros even though they don't |
||||
# start with `h' or `H'. |
||||
next if $name =~ /^FUNC_(ENTER|LEAVE)(_(NO)?API|_PACKAGE|_STATIC)?(_NAMECHECK_ONLY|_NOFS|_NOCLEAR|_NOINIT|_NOPUSH)?(_NOFUNC|_TAG)?$/; |
||||
next if $name =~ /^(BEGIN|END)_FUNC$/; |
||||
next if $name =~ /^U?INT(8|16|32|64)(ENCODE|DECODE)(_VAR)?$/; |
||||
next if $name =~ /^CI_(PRINT_STATS|INC_SRC|INC_DST)$/; |
||||
next if $name =~ /^(ABS|ADDR_OVERFLOW|ALL_MEMBERS|BOUND|CONSTR|DETECT_[I|F|M]|DOWN)$/; |
||||
next if $name =~ /^(MIN3?|MAX3?|NELMTS|POWER_OF_TWO|REGION_OVERFLOW)$/; |
||||
next if $name =~ /^(SIZE_OVERFLOW|UNIQUE_MEMBERS|S_ISDIR)$/; |
||||
next if $name =~ /^addr_defined$/; |
||||
next if $name =~ /^TERMINATOR$/; |
||||
|
||||
# Ignore callback invocation |
||||
next if $name =~ /^(op|cb|OP|iter_op|func)$/; |
||||
|
||||
# Ignore main |
||||
next if $name =~ /^main$/; |
||||
|
||||
# This often appears in preprocessor lines that span multiple lines |
||||
next if $name =~ /^(defined)$/; |
||||
|
||||
# These are Windows system calls. Ignore them. |
||||
next if $name =~ /^(_get_osfhandle|GetFileInformationByHandle|SetFilePointer|GetLastError|SetEndOfFile)$/; |
||||
next if $name =~ /^(FindNextFile|FindClose|_tzset|Wgettimeofday|GetSystemTimeAsFileTime|GetUserName)$/; |
||||
next if $name =~ /^(DeleteCriticalSection|TlsFree|TlsGetValue|CreateThread)$/; |
||||
next if $name =~ /^(ExpandEnvironmentStringsA|LockFileEx|UnlockFileEx)$/; |
||||
next if $name =~ /^(DllMain|LocalAlloc|LocalFree)$/; |
||||
next if $name =~ /^(FindFirstFileA|FindNextFileA)$/; |
||||
next if $name =~ /^(_beginthread|(Initialize|Enter|Leave)CriticalSection|TlsAlloc)$/; |
||||
|
||||
# These are MPI function calls. Ignore them. |
||||
next if $name =~ /^(MPI_)/; |
||||
|
||||
# These are POSIX threads function calls. Ignore them. |
||||
next if $name =~ /^pthread_/; |
||||
|
||||
# These are zlib & szlib function calls. Ignore them. |
||||
next if $name =~ /^(inflate|SZ_)/; |
||||
next if $name =~ /^compress2$/; |
||||
|
||||
# These is an H5Dfill function. Ignore it in this file. |
||||
if($filename =~ /H5Dfill/) { |
||||
next if $name =~ /^(alloc_func)$/; |
||||
} |
||||
|
||||
# These are H5Zscaleoffset functions. Ignore them in this file. |
||||
if($filename =~ /H5Zscaleoffset/) { |
||||
next if $name =~ /^(pow_fun|round_fun|abs_fun|lround_fun|llround_fun)$/; |
||||
} |
||||
|
||||
# This is a macro parameter in H5Rint.c. Ignore it in this file. |
||||
if($filename =~ /H5Rint/) { |
||||
next if $name =~ /^(func)$/; |
||||
} |
||||
|
||||
# Internal calls in the HDFS VFD (H5FDhdfs.c). Ignore it in this file. |
||||
if($filename =~ /H5FDhdfs/) { |
||||
next if $name =~ /^(hdfs)/; |
||||
} |
||||
|
||||
# Macros, etc. from the mirror VFD (H5FDmirror.c). Ignore in this file. |
||||
if($filename =~ /H5FDmirror/) { |
||||
next if $name =~ /^(LOG)/; |
||||
next if $name =~ /^(BSWAP_64|is_host_little_endian)$/; |
||||
} |
||||
|
||||
# These are things in H5FDs3comms.c and H5FDros3.c. Ignore them in these files. |
||||
if($filename =~ /H5FDs3comms|H5FDros3/) { |
||||
next if $name =~ /^(curl_|curlwritecallback|gmnow)/; |
||||
next if $name =~ /^(ros3_|ROS3_|S3COMMS_)/; |
||||
next if $name =~ /^(EVP_sha256|SHA256|ISO8601NOW)$/; |
||||
} |
||||
|
||||
# TESTING (not comprehensive - just noise reduction) |
||||
|
||||
# Test macros and functions (testhdf5.h) |
||||
next if $name =~ /^(AddTest|TestErrPrintf|TestSummary|TestCleanup|TestShutdown)$/; |
||||
next if $name =~ /^(CHECK|CHECK_PTR|CHECK_PTR_NULL|CHECK_PTR_EQ|CHECK_I)$/; |
||||
next if $name =~ /^(VERIFY|VERIFY_STR|VERIFY_TYPE|MESSAGE|ERROR)$/; |
||||
|
||||
# Test macros and functions (h5test.h) |
||||
next if $name =~ /^(TESTING|PASSED|SKIPPED|PUTS_ERROR|FAIL_PUTS_ERROR|FAIL_STACK_ERROR|TEST_ERROR|AT)$/; |
||||
next if $name =~ /^(GetTestExpress)$/; |
||||
|
||||
# Ignore functions that start with test_ or check_ |
||||
next if $name =~ /^test_/; |
||||
next if $name =~ /^check_/; |
||||
|
||||
# Ignore functions that start with h5_ |
||||
next if $name =~ /^h5_/; |
||||
|
||||
# Ignore process completed status |
||||
next if $name =~ /(WIFEXITED|WEXITSTATUS|WIFSIGNALED|WTERMSIG|WCOREDUMP|WIFSTOPPED|WSTOPSIG)/; |
||||
|
||||
# Ignore usage functions |
||||
next if $name =~ /^usage$/; |
||||
|
||||
# Ignore callbacks |
||||
next if $name =~ /(_cb\d?)$/; |
||||
|
||||
# Specific tests (not even remotely comprehensive) |
||||
|
||||
# accum test code |
||||
if($filename =~ /accum/) { |
||||
next if $name =~ /^(accum_)/; |
||||
} |
||||
|
||||
# cache test code |
||||
if($filename =~ /cache/) { |
||||
next if $name =~ /(_entry|_entries|_cache|_check|_dependency|_status|_op)$/; |
||||
next if $name =~ /^(verify_|smoke_check_|row_major_|col_major_)/; |
||||
next if $name =~ /^(resize_configs_are_equal|CACHE_ERROR)$/ |
||||
} |
||||
|
||||
# Splitter VFD test code. Ignore in vfd.c. |
||||
if($filename =~ /vfd/) { |
||||
next if $name =~ /^(SPLITTER_|splitter_)/; |
||||
next if $name =~ /(_splitter_)/; |
||||
next if $name =~ /^(file_exists)$/; |
||||
} |
||||
|
||||
# S3 VFD test code. Ignore in ros3.c and s3comms.c. |
||||
# HDFS VFD test code. Ignore in hdfs.c. |
||||
if($filename =~ /ros3|s3comms|hdfs/) { |
||||
next if $name =~ /^(JSVERIFY|JSFAILED_|JSERR_|jserr_|FAIL_)/; |
||||
next if $name =~ /^(curl_)/; |
||||
next if $name =~ /^(S3COMMS_FORMAT_CREDENTIAL|ISO8601NOW|gmnow)$/; |
||||
} |
||||
|
||||
# VDS test code. Ignore in vds.c. |
||||
if($filename =~ /vds/) { |
||||
next if $name =~ /^(vds_)/; |
||||
} |
||||
|
||||
print "$filename:$.: $name\n"; |
||||
} |
||||
|
||||
} |
||||
|
||||
# Close the file |
||||
close($fh); |
||||
} |
||||
|
||||
if($#ARGV gt 0) { |
||||
print "\n"; |
||||
print "NOTE:\n"; |
||||
print "If any files were skipped due to being exempt, you can inspect them manually\n"; |
||||
print "by using this script on them one at a time, which will always process the file.\n"; |
||||
} |
||||
@ -0,0 +1,848 @@ |
||||
#! /bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
|
||||
# Check Copyright notice. |
||||
# Check that all the files have the proper copyright notice. |
||||
# It goes down directories recursively. |
||||
# |
||||
# Programmer: Albert Cheng |
||||
# Created Data: 2003/07/22 |
||||
# Modification: |
||||
# Rewrote most of it. Albert Cheng, 2005/10/10. |
||||
|
||||
# Setup |
||||
# |
||||
PROGNAME=$0 |
||||
DIFF="diff" |
||||
INITFILE=.h5chkright.ini |
||||
EXCEPTIONS=/tmp/h5chkright.except.$$ |
||||
tmpfile=/tmp/h5chkright_tmp.$$ |
||||
EXCEPTIONDIRS="-name .git" # at least skip .git directories. |
||||
EXTRACTEDFILE=/tmp/h5chkright.extracted.$$ |
||||
VERBOSE= # default no |
||||
FIXIT= # default no |
||||
DIRS=. # default current directory |
||||
NFAILEDFILES=0 # Number of failed files found. |
||||
NPASSEDFILES=0 # Number of passed files found. |
||||
NFIXEDFILES=0 # Number of files fixed. |
||||
NFIXFAILEDFILES=0 # Number of files fix failed. |
||||
NUMBEGINLINES=60 # Copyright notice should be located within the |
||||
# this number of lines at the beginning of the file. |
||||
THGCOPYRIGHTSTR="Copyright by The HDF Group." |
||||
UICOPYRIGHTSTR="Copyright by the Board of Trustees of the University of Illinois" |
||||
|
||||
PASSEDLOG=/tmp/h5chkright_passed.$$ |
||||
SKIPPEDLOG=/tmp/h5chkright_skipped.$$ |
||||
FAILEDLOG=/tmp/h5chkright_failed.$$ |
||||
FIXEDLOG=/tmp/h5chkright_fixed.$$ |
||||
FIXFAILEDLOG=/tmp/h5chkright_fixfailed.$$ |
||||
|
||||
C_COPYRIGHT=/tmp/h5chkright_C.$$ # C style copyright |
||||
FTN_COPYRIGHT=/tmp/h5chkright_FTN.$$ # Fortran style copyright |
||||
HTM_COPYRIGHT=/tmp/h5chkright_HTM.$$ # HTML style copyright |
||||
SH_COPYRIGHT=/tmp/h5chkright_SH.$$ # SHELL style copyright |
||||
SH_COPYRIGHT2=/tmp/h5chkright_SH2.$$ # SHELL style copyright, 2nd style. |
||||
WINBAT_COPYRIGHT=/tmp/h5chkright_WINBAT.$$ # Windows Batch file Copyright notice |
||||
CONFIGURE_AC_COPYRIGHT=/tmp/h5chkright_CONFIGURE_AC.$$ # configure.ac file Copyright notice |
||||
|
||||
tmpfixfile=/tmp/h5chkright_fix.$$ # Temporary fixed copy of file |
||||
|
||||
|
||||
# Caution message of the fix feature. |
||||
FIXCAUTIONMSG() |
||||
{ |
||||
cat <<EOF |
||||
**CAUTION** |
||||
The fix is a best attempt. Check the changes before committing them. |
||||
EOF |
||||
} |
||||
|
||||
|
||||
# Help page |
||||
# |
||||
USAGE() |
||||
{ |
||||
cat <<EOF |
||||
Usage: $PROGNAME [-h | -help] [-fname name-patter] [-v | -v9] [dir1 dir2 ...] |
||||
Check copyright notices of files in [dir1 dir2 ...}. |
||||
Default is to check files in current directory. |
||||
-h | -help |
||||
show this page. |
||||
-fname name-pattern |
||||
limit to files of name-pattern |
||||
-v |
||||
verbose mode |
||||
-v9 |
||||
highly verbose |
||||
-fix |
||||
fix failed files if possible. |
||||
EOF |
||||
FIXCAUTIONMSG |
||||
} |
||||
|
||||
|
||||
# Print Debug output |
||||
# |
||||
PRINTDEBUG() |
||||
{ |
||||
if [ -n "$VERBOSE" ]; then |
||||
echo $* |
||||
else |
||||
: # noop |
||||
fi |
||||
} |
||||
|
||||
|
||||
# Generate various styles of Copyright notices |
||||
# |
||||
BUILDCOPYRIGHT() |
||||
{ |
||||
# C and C++ source Copyright notice |
||||
cat > ${C_COPYRIGHT} << \EOF |
||||
* Copyright by The HDF Group. * |
||||
* All rights reserved. * |
||||
* * |
||||
* This file is part of HDF5. The full HDF5 copyright notice, including * |
||||
* terms governing use, modification, and redistribution, is contained in * |
||||
* the COPYING file, which can be found at the root of the source code * |
||||
* distribution tree, or in https://www.hdfgroup.org/licenses. * |
||||
* If you do not have access to either file, you may request a copy from * |
||||
* help@hdfgroup.org. * |
||||
EOF |
||||
|
||||
# Fortran9X source Copyright notice |
||||
cat > ${FTN_COPYRIGHT} << \EOF |
||||
! Copyright by The HDF Group. * |
||||
! All rights reserved. * |
||||
! * |
||||
! This file is part of HDF5. The full HDF5 copyright notice, including * |
||||
! terms governing use, modification, and redistribution, is contained in * |
||||
! the COPYING file, which can be found at the root of the source code * |
||||
! distribution tree, or in https://www.hdfgroup.org/licenses. * |
||||
! If you do not have access to either file, you may request a copy from * |
||||
! help@hdfgroup.org. * |
||||
EOF |
||||
|
||||
# HTML file Copyright notice |
||||
cat > ${HTM_COPYRIGHT} << \EOF |
||||
* Copyright by The HDF Group. * |
||||
* All rights reserved. * |
||||
* * |
||||
* This file is part of HDF5. The full HDF5 copyright notice, including * |
||||
* terms governing use, modification, and redistribution, is contained in * |
||||
* the COPYING file, which can be found at the root of the source code * |
||||
* distribution tree, or in https://www.hdfgroup.org/licenses. * |
||||
* If you do not have access to either file, you may request a copy from * |
||||
* help@hdfgroup.org. * |
||||
EOF |
||||
|
||||
# Shell style Copyright notice |
||||
cat > ${SH_COPYRIGHT} << \EOF |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
EOF |
||||
|
||||
# Shell style Copyright notice (2nd type) |
||||
cat > ${SH_COPYRIGHT2} << \EOF |
||||
## Copyright by The HDF Group. |
||||
## All rights reserved. |
||||
## |
||||
## This file is part of HDF5. The full HDF5 copyright notice, including |
||||
## terms governing use, modification, and redistribution, is contained in |
||||
## the COPYING file, which can be found at the root of the source code |
||||
## distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
## If you do not have access to either file, you may request a copy from |
||||
## help@hdfgroup.org. |
||||
EOF |
||||
|
||||
# Windows Batch file Copyright notice |
||||
cat > ${WINBAT_COPYRIGHT} << \EOF |
||||
@REM Copyright by The HDF Group. |
||||
@REM All rights reserved. |
||||
@REM |
||||
@REM This file is part of HDF5. The full HDF5 copyright notice, including |
||||
@REM terms governing use, modification, and redistribution, is contained in |
||||
@REM the COPYING file, which can be found at the root of the source code |
||||
@REM distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
@REM If you do not have access to either file, you may request a copy from |
||||
@REM help@hdfgroup.org. |
||||
EOF |
||||
|
||||
# configure.ac file Copyright notice |
||||
cat > ${CONFIGURE_AC_COPYRIGHT} << \EOF |
||||
dnl Copyright by The HDF Group. |
||||
dnl All rights reserved. |
||||
dnl |
||||
dnl This file is part of HDF5. The full HDF5 copyright notice, including |
||||
dnl terms governing use, modification, and redistribution, is contained in |
||||
dnl the COPYING file, which can be found at the root of the source code |
||||
dnl distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
dnl If you do not have access to either file, you may request a copy from |
||||
dnl help@hdfgroup.org. |
||||
EOF |
||||
|
||||
} |
||||
|
||||
# Initialization |
||||
# |
||||
# Initialize file format: |
||||
# Each line is a keyword for action and the rest are values. |
||||
# Keywords: |
||||
# '#' Comments |
||||
# skip Files to be skipped |
||||
# prune Directories to be skipped. Notice this prunes all directories |
||||
# with the same name. E.g., |
||||
# "prune test" skips test, fortran/test, c++/test, ... |
||||
# (See -name option in the find command.) |
||||
# prunepath Directory or file to be skipped. Notice this is different from |
||||
# prunes since it matches the exact pathname. E.g., |
||||
# "prunepath ./tools/testfiles" skips the directory/file matching |
||||
# exactly that path but NOT tools/h5dump/testfiles nor |
||||
# tools/h5dump/testfiles. |
||||
# (See -path option in the find command.) |
||||
# |
||||
INITIALIZATION() |
||||
{ |
||||
# clean up log files |
||||
rm -f $PASSEDLOG $SKIPPEDLOG $FAILEDLOG $FIXEDLOG $FIXFAILEDLOG |
||||
|
||||
# Generate various styles of copyright notice. |
||||
BUILDCOPYRIGHT |
||||
|
||||
echo Initialization... |
||||
# setup exceptions. |
||||
cp /dev/null $EXCEPTIONS |
||||
|
||||
# Process Initial setting file if exists |
||||
if [ -r $INITFILE ]; then |
||||
while read key value; do |
||||
case "$key" in |
||||
\#* | '') # Comment or blank line, skip it |
||||
continue |
||||
;; |
||||
skip) |
||||
echo $key $value |
||||
echo $value >> $EXCEPTIONS |
||||
;; |
||||
prune) |
||||
echo $key $value |
||||
EXCEPTIONDIRS="$EXCEPTIONDIRS -o -name $value" |
||||
;; |
||||
prunepath) |
||||
echo $key $value |
||||
EXCEPTIONDIRS="$EXCEPTIONDIRS -o -path $value" |
||||
;; |
||||
*) |
||||
echo unknown setting input in file $INITFILE |
||||
echo $key $value |
||||
;; |
||||
esac |
||||
done < $INITFILE |
||||
fi |
||||
|
||||
# Change EXCEPTIONDIRS to be compatible with find command. |
||||
EXCEPTIONDIRS="( $EXCEPTIONDIRS ) -prune -o" |
||||
echo Initialization done |
||||
} |
||||
|
||||
|
||||
# Parse Options |
||||
# |
||||
PARSE_OPTION() |
||||
{ |
||||
while test $# -gt 0 ; do |
||||
case "$1" in |
||||
-h | -help ) |
||||
USAGE |
||||
exit 0 |
||||
;; |
||||
-fname ) |
||||
shift |
||||
FNAME="$1" |
||||
;; |
||||
-fix ) |
||||
FIXIT=yes |
||||
;; |
||||
-v* ) |
||||
VERBOSE=yes |
||||
if test X$1 = X-v9; then |
||||
set -x |
||||
fi |
||||
;; |
||||
-* ) |
||||
echo "***Unknown option ($1)" |
||||
USAGE |
||||
exit 1 |
||||
;; |
||||
* ) |
||||
DIRS=$* |
||||
break |
||||
;; |
||||
esac |
||||
shift |
||||
done |
||||
} |
||||
|
||||
|
||||
# Rinse the file by, |
||||
# removing all \r which is often present in Windows files; |
||||
# replace tabs with equivalent spaces; |
||||
# removing all trailing spaces. |
||||
# $1 is the file to be rinsed. |
||||
RINSE() |
||||
{ |
||||
rf=$1 |
||||
cp $rf $tmpfile |
||||
dos2unix < $tmpfile | expand | sed -e 's/ *$//' > $rf |
||||
} |
||||
|
||||
# Locate a line in the file and print the line number. |
||||
# Print 0 if not found; -1 if error. |
||||
# $1 The line. |
||||
# $2 The file. |
||||
# |
||||
FindLineInFile() |
||||
{ |
||||
if [ $# -ne 2 ]; then |
||||
# expect two arguments |
||||
echo -1 |
||||
return |
||||
fi |
||||
xline=$1 |
||||
xf=$2 |
||||
xpos=`grep -n "${xline}" $xf` |
||||
if [ "$?" -ne 0 ] ; then |
||||
# Not found, return 0 |
||||
xpos=0 |
||||
else |
||||
xpos=`echo $xpos | cut -f1 -d:` |
||||
fi |
||||
echo $xpos |
||||
} |
||||
|
||||
|
||||
# Match Copyright notice. |
||||
# $1 file which contains the expected copyright notice. |
||||
# $2 file in which to look for the copyright notice. |
||||
# Copyright notice must be found within the beginning $NUMBEGINLINES of lines. |
||||
# Hunt for the particular string $THGCOPYRIGHTSTR which signifies the beginning |
||||
# of the copyright notice. |
||||
# |
||||
MATCH_COPYRIGHT() |
||||
{ |
||||
if [ $# -ne 2 ]; then |
||||
# expect two arguments |
||||
echo FAILED |
||||
return |
||||
fi |
||||
COPYRIGHTFILE=$1 |
||||
f=$2 |
||||
nlines=`wc -l ${COPYRIGHTFILE} | cut -f1 -d' '` |
||||
# Find a line that contains the copyright string and its line number in |
||||
# the file. |
||||
begin=`FindLineInFile "${THGCOPYRIGHTSTR}" $f` |
||||
if [ "$begin" -le 0 ] ; then |
||||
# Not found, generate an empty dummy file |
||||
cp /dev/null ${EXTRACTEDFILE} |
||||
false |
||||
else |
||||
if [ $begin -gt 1 ]; then |
||||
begin=`expr $begin - 1` |
||||
fi |
||||
end=`expr $begin + $nlines - 1` |
||||
sed -n -e "${begin},${end}p" < $f > ${EXTRACTEDFILE} |
||||
RINSE ${EXTRACTEDFILE} |
||||
$DIFF ${EXTRACTEDFILE} ${COPYRIGHTFILE} >/dev/null 2>&1 |
||||
fi |
||||
if test $? -eq 0; then |
||||
echo PASSED |
||||
else |
||||
echo FAILED |
||||
fi |
||||
} |
||||
|
||||
# Fix Copyright notice. |
||||
# $1 file which contains the expected copyright notice. |
||||
# $2 file in which to look for the copyright notice. |
||||
# Copyright notice must be found within the beginning $NUMBEGINLINES of lines. |
||||
# Hunt for the particular string $THGCOPYRIGHTSTR which signifies the beginning |
||||
# of the copyright notice. |
||||
# |
||||
FIX_COPYRIGHT() |
||||
{ |
||||
if [ $# -ne 2 ]; then |
||||
# expect two arguments |
||||
echo FAILED |
||||
return |
||||
fi |
||||
COPYRIGHTFILE=$1 |
||||
f=$2 |
||||
nlines=`wc -l ${COPYRIGHTFILE} | cut -f1 -d' '` |
||||
# If the file has UICOPYRIGHTSTR but not THGCOPYRIGHTSTR, then replace the lines |
||||
# starting at UICOPYRIGHTSTR and down. |
||||
# If the file has THGCOPYRIGHTSTR, then replace the lines starting at the |
||||
# THGCOPYRIGHTSTR and down. |
||||
# If neither found, abort it. |
||||
|
||||
# Find a line that contains the THG copyright string and its line number in |
||||
# the file. |
||||
insertbegin=`FindLineInFile "${THGCOPYRIGHTSTR}" $f` |
||||
if [ $insertbegin -gt 0 ]; then |
||||
insertUIbegin=`FindLineInFile "${UICOPYRIGHTSTR}" $f` |
||||
if [ $insertUIbegin -gt 0 ]; then |
||||
insertend=`expr $insertbegin + $nlines + 1` |
||||
else |
||||
insertend=`expr $insertbegin + $nlines` |
||||
fi |
||||
else |
||||
insertbegin=`FindLineInFile "${UICOPYRIGHTSTR}" $f` |
||||
if [ $insertbegin -gt 0 ]; then |
||||
insertend=`expr $insertbegin + $nlines - 1` # no need to -2. See below. |
||||
else |
||||
FIXFAILED |
||||
return |
||||
fi |
||||
fi |
||||
|
||||
# Copy line 1 up to insertbegin from original file |
||||
xbegin=`expr $insertbegin - 1` |
||||
if [ $xbegin -gt 0 ]; then |
||||
sed -n -e "1,${xbegin}p" $f > $tmpfixfile |
||||
else |
||||
cp /dev/null $tmpfixfile # make it empty. |
||||
fi |
||||
|
||||
# now the correct copyright file |
||||
cat $COPYRIGHTFILE >> $tmpfixfile |
||||
|
||||
# the rest of the original file |
||||
sed -n -e "${insertend},"'$p' $f >> $tmpfixfile |
||||
|
||||
# copy them all back to the original file |
||||
cp $tmpfixfile $f |
||||
FIXED |
||||
rm -f $tmpfixfile |
||||
} |
||||
|
||||
# Check C and C++ source files |
||||
# |
||||
C_SOURCE() |
||||
{ |
||||
f=$1 |
||||
case `MATCH_COPYRIGHT $C_COPYRIGHT $f` in |
||||
PASSED) |
||||
PASSED $f |
||||
return |
||||
;; |
||||
FAILED) |
||||
# show the difference |
||||
FAILED $f |
||||
$DIFF ${EXTRACTEDFILE} ${C_COPYRIGHT} |
||||
if [ -n "$FIXIT" ]; then |
||||
FIX_COPYRIGHT $C_COPYRIGHT $f |
||||
fi |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Check Fortran90 source files |
||||
# |
||||
FORTRAN_SOURCE() |
||||
{ |
||||
f=$1 |
||||
case `MATCH_COPYRIGHT $FTN_COPYRIGHT $f` in |
||||
PASSED) |
||||
PASSED $f |
||||
return |
||||
;; |
||||
FAILED) |
||||
# show the difference |
||||
FAILED $f |
||||
$DIFF ${EXTRACTEDFILE} ${FTN_COPYRIGHT} |
||||
if [ -n "$FIXIT" ]; then |
||||
FIX_COPYRIGHT $FTN_COPYRIGHT $f |
||||
fi |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Check HTML Files |
||||
# |
||||
HTML_FILE() |
||||
{ |
||||
f=$1 |
||||
case `MATCH_COPYRIGHT $HTM_COPYRIGHT $f` in |
||||
PASSED) |
||||
PASSED $f |
||||
return |
||||
;; |
||||
FAILED) |
||||
# show the difference |
||||
FAILED $f |
||||
$DIFF ${EXTRACTEDFILE} ${HTM_COPYRIGHT} |
||||
if [ -n "$FIXIT" ]; then |
||||
FIX_COPYRIGHT $HTM_COPYRIGHT $f |
||||
fi |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Check Shell script files which use the style of copyright notice of leading #'s. |
||||
# |
||||
SHELL_FILE() |
||||
{ |
||||
f=$1 |
||||
case `MATCH_COPYRIGHT $SH_COPYRIGHT $f` in |
||||
PASSED) |
||||
PASSED $f |
||||
return |
||||
;; |
||||
FAILED) |
||||
# show the difference |
||||
FAILED $f |
||||
$DIFF ${EXTRACTEDFILE} ${SH_COPYRIGHT} |
||||
if [ -n "$FIXIT" ]; then |
||||
FIX_COPYRIGHT $SH_COPYRIGHT $f |
||||
fi |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Check files that use #'s as comments such as Makefile. |
||||
# The Copyright body of text happen to be the same as used by Shell script |
||||
# files. |
||||
# |
||||
MAKE_FILE() |
||||
{ |
||||
f=$1 |
||||
case `MATCH_COPYRIGHT $SH_COPYRIGHT $f` in |
||||
PASSED) |
||||
PASSED $f |
||||
return |
||||
;; |
||||
FAILED) |
||||
# show the difference |
||||
FAILED $f |
||||
$DIFF ${EXTRACTEDFILE} ${SH_COPYRIGHT} |
||||
if [ -n "$FIXIT" ]; then |
||||
FIX_COPYRIGHT $SH_COPYRIGHT $f |
||||
fi |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Check Windows Batch files |
||||
# |
||||
BATCH_FILE() |
||||
{ |
||||
f=$1 |
||||
case `MATCH_COPYRIGHT $WINBAT_COPYRIGHT $f` in |
||||
PASSED) |
||||
PASSED $f |
||||
return |
||||
;; |
||||
FAILED) |
||||
# show the difference |
||||
FAILED $f |
||||
$DIFF ${EXTRACTEDFILE} ${WINBAT_COPYRIGHT} |
||||
if [ -n "$FIXIT" ]; then |
||||
FIX_COPYRIGHT $WINBAT_COPYRIGHT $f |
||||
fi |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Check Configure.in type files |
||||
# |
||||
CONFIGURE_AC_FILE() |
||||
{ |
||||
f=$1 |
||||
case `MATCH_COPYRIGHT $CONFIGURE_AC_COPYRIGHT $f` in |
||||
PASSED) |
||||
PASSED $f |
||||
return |
||||
;; |
||||
FAILED) |
||||
# show the difference |
||||
FAILED $f |
||||
$DIFF ${EXTRACTEDFILE} ${CONFIGURE_AC_COPYRIGHT} |
||||
if [ -n "$FIXIT" ]; then |
||||
FIX_COPYRIGHT $CONFIGURE_AC_COPYRIGHT $f |
||||
fi |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Guess the type of file. |
||||
# Inspect the first 5 lines to guess what type of file it is. |
||||
# |
||||
GUESS_File_Type() |
||||
{ |
||||
if [ $# -ne 1 ]; then |
||||
echo "wrong number of arguments($#)" |
||||
return |
||||
fi |
||||
f=$1 |
||||
# Now guess the file type. |
||||
head -5 < $f > $tmpfile |
||||
if head -1 < $tmpfile | grep '^#!' > /dev/null; then |
||||
# First line is "#!". It is likely a shell script or similar type. |
||||
echo SHELL_FILE |
||||
elif grep '\/\*' < $tmpfile > /dev/null; then |
||||
# Found some lines containing '/*'. It may be a C/C++ style file. |
||||
echo C_SOURCE |
||||
elif grep '^!' < $tmpfile > /dev/null; then |
||||
# Some lines start with a "!". It may be a Fortran 9X style file. |
||||
echo FORTRAN_SOURCE |
||||
elif grep '^#' < $tmpfile > /dev/null; then |
||||
# Some lines start with a "#". It may be a shell like type. |
||||
# Put this after C_SOURCE which may have #define and such lines. |
||||
echo SHELL_FILE |
||||
elif grep '^dnl' < $tmpfile > /dev/null; then |
||||
# Some lines start with a "dnl". It may be a configure.ac type file. |
||||
echo CONFIGURE_AC_FILE |
||||
elif grep -i '^<html>' < $tmpfile > /dev/null || \ |
||||
grep '^<!--' < $tmpfile > /dev/null ; then |
||||
# Some lines start with a "<html>" or having an html comment tag. |
||||
# It may be an HTML file. |
||||
echo HTML_FILE |
||||
else |
||||
# Unknown type. |
||||
echo UNKNOWN_TYPE |
||||
fi |
||||
} |
||||
|
||||
|
||||
# Check Unknown type file. |
||||
# First check if there is something that resemble a copyright notice in |
||||
# the first "page". If so, then inspect the first 5 lines to guess what |
||||
# type of file it is. Then try verify Copyright notice according to |
||||
# guessed type. |
||||
# |
||||
UNKNOWN_FILE() |
||||
{ |
||||
f=$1 |
||||
if head -$NUMBEGINLINES < $f | grep "${COPYRIGHTSTR}" > /dev/null; then |
||||
xftype=`GUESS_File_Type $f` |
||||
PRINTDEBUG f=$f xftype=$xftype > /dev/tty |
||||
case $xftype in |
||||
SHELL_FILE) SHELL_FILE $f;; |
||||
C_SOURCE) C_SOURCE $f;; |
||||
FORTRAN_SOURCE) FORTRAN_SOURCE $f;; |
||||
SHELL_FILE) SHELL_FILE $f;; |
||||
HTML_FILE) HTML_FILE $f;; |
||||
UNKNOWN_TYPE) UNKNOWN_TYPE $f;; |
||||
esac |
||||
else |
||||
# Unknown type. |
||||
UNKNOWN_TYPE $f |
||||
fi |
||||
} |
||||
|
||||
|
||||
# Passed checking. |
||||
# $1 file that has passed. |
||||
# |
||||
PASSED() |
||||
{ |
||||
if test X-$VERBOSE = X-yes; then |
||||
echo " PASSED" |
||||
fi |
||||
echo $1 >> $PASSEDLOG |
||||
} |
||||
|
||||
|
||||
# Unknown file type. Considered a fail. |
||||
# $1 name of unknown file. |
||||
# |
||||
UNKNOWN_TYPE() |
||||
{ |
||||
echo "UNKNOWN type: $1" | tee -a $FAILEDLOG |
||||
} |
||||
|
||||
|
||||
# Skip checking. |
||||
# $1 file that is skipped. |
||||
# |
||||
SKIP() |
||||
{ |
||||
if test X-$VERBOSE = X-yes; then |
||||
echo " SKIPPED" |
||||
fi |
||||
echo $1 >> $SKIPPEDLOG |
||||
} |
||||
|
||||
|
||||
# Failed checking. |
||||
# $1 file that has failed. |
||||
# |
||||
FAILED() |
||||
{ |
||||
echo "FAILED: $1" |
||||
echo $1 >> $FAILEDLOG |
||||
} |
||||
|
||||
|
||||
# Copyright fixed. |
||||
# $1 file that has been fixed. |
||||
# |
||||
FIXED() |
||||
{ |
||||
if test X-$VERBOSE = X-yes; then |
||||
echo " FIXED" |
||||
fi |
||||
echo $1 >> $FIXEDLOG |
||||
} |
||||
|
||||
|
||||
# Copyright fix failed. |
||||
# $1 file that has failed. |
||||
# |
||||
FIXFAILED() |
||||
{ |
||||
echo "FIX FAILED: $1" |
||||
echo $1 >> $FIXFAILEDLOG |
||||
} |
||||
|
||||
|
||||
# |
||||
# Main body |
||||
|
||||
PARSE_OPTION "$@" |
||||
INITIALIZATION |
||||
|
||||
# use find to list all those file names and process them |
||||
# one by one. |
||||
if test -z "$FNAME" ; then |
||||
find $DIRS $EXCEPTIONDIRS -type f -print |
||||
else |
||||
find $DIRS -type f -name "${FNAME}" -print |
||||
fi | |
||||
while read file; do |
||||
if test X-$VERBOSE = X-yes; then |
||||
echo checking ${file}... |
||||
fi |
||||
if echo $file | egrep -f $EXCEPTIONS > /dev/null; then |
||||
SKIP ${file} |
||||
else |
||||
case ${file} in |
||||
*.c | *.h | *.cpp ) |
||||
C_SOURCE ${file} |
||||
;; |
||||
*.f90 ) |
||||
FORTRAN_SOURCE ${file} |
||||
;; |
||||
*.htm | *.html ) |
||||
HTML_FILE ${file} |
||||
;; |
||||
*.sh | *.sh.in ) |
||||
SHELL_FILE ${file} |
||||
;; |
||||
*.pl ) |
||||
# Perl script files are similar to Shell files |
||||
SHELL_FILE ${file} |
||||
;; |
||||
*Makefile | *Makefile.in | *Makefile.am | Makefile.dist ) |
||||
MAKE_FILE ${file} |
||||
;; |
||||
configure.ac ) |
||||
CONFIGURE_AC_FILE ${file} |
||||
;; |
||||
*.bat | *.BAT ) |
||||
# Windows Batch files |
||||
BATCH_FILE ${file} |
||||
;; |
||||
*.h5 | *.hdf5 ) |
||||
# Ignore HDF5 data files |
||||
continue |
||||
;; |
||||
*.jpg | *.obj | *.gif | *.png | *.pdf | \ |
||||
*.JPG | *.OBJ | *.GIF | *.PNG | *.PDF ) |
||||
# Ignore binary data files |
||||
continue |
||||
;; |
||||
*.zip | *.dsp | *.dsw | *.js | *.sln ) |
||||
# Ignore Windows binary or special files. |
||||
# .dsp & .dsw are Visual Studio project files. |
||||
# .sln are .NET solution files. |
||||
# .js are Microsoft Java Script files. |
||||
continue |
||||
;; |
||||
*CVS/* ) |
||||
# Ignore CVS control files. |
||||
continue |
||||
;; |
||||
*.txt | *.TXT ) |
||||
# Ignore text files. |
||||
continue |
||||
;; |
||||
*) |
||||
UNKNOWN_FILE $file |
||||
;; |
||||
esac |
||||
fi |
||||
done |
||||
|
||||
# check results |
||||
if [ -f $PASSEDLOG ]; then |
||||
NPASSEDFILES=`wc -l < $PASSEDLOG` |
||||
fi |
||||
if [ -f $FAILEDLOG ]; then |
||||
NFAILEDFILES=`wc -l < $FAILEDLOG` |
||||
fi |
||||
if [ -f $FIXEDLOG ]; then |
||||
NFIXEDFILES=`wc -l < $FIXEDLOG` |
||||
fi |
||||
if [ -f $FIXFAILEDLOG ]; then |
||||
NFIXFAILEDFILES=`wc -l < $FIXFAILEDLOG` |
||||
fi |
||||
|
||||
# Cleanup |
||||
rm -f $C_COPYRIGHT $FTN_COPYRIGHT $HTM_COPYRIGHT $SH_COPYRIGHT $SH_COPYRIGHT2 |
||||
rm -f $EXCEPTIONS $EXTRACTEDFILE |
||||
rm -f $PASSEDLOG $SKIPPEDLOG $FAILEDLOG $FIXEDLOG $FIXFAILEDLOG |
||||
|
||||
# Report Results |
||||
# Results are not total accurate--e.g., Skipped are not counted, thus not |
||||
# reported. |
||||
# |
||||
echo "*******************" |
||||
echo " REPORT" |
||||
echo "*******************" |
||||
echo Number of passed files = $NPASSEDFILES |
||||
echo Number of failed files = $NFAILEDFILES |
||||
echo Number of fixed files = $NFIXEDFILES |
||||
echo Number of fix failed files = $NFIXFAILEDFILES |
||||
if [ $NFIXEDFILES -gt 0 ]; then |
||||
FIXCAUTIONMSG |
||||
fi |
||||
|
||||
if [ $NFAILEDFILES -gt 0 ]; then |
||||
exitcode=1 |
||||
else |
||||
exitcode=0 |
||||
fi |
||||
exit $exitcode |
||||
@ -0,0 +1,380 @@ |
||||
#! /bin/sh |
||||
# Build and Test HDF5 using cmake. |
||||
# Author: Allen Byrne |
||||
# Albert Cheng |
||||
# Creation Date: Nov 2012 |
||||
# Modified: |
||||
# Changed to use the quick steps described in INSTALL_CMake.txt. (AKC 2014/1/1) |
||||
|
||||
# Copyright: The HDF Group, 2012-14 |
||||
|
||||
# Debug Print: remove the comment hash if you want DPRINT to do echo |
||||
DPRINT=: |
||||
#DPRINT=echo |
||||
|
||||
# variable names |
||||
# The "extra" number is the step number and easier to see all logfiles in |
||||
# the sorted order of steps |
||||
progname=`basename $0` # program name |
||||
configlog="#${progname}_1config.log" |
||||
makelog="#${progname}_2build.log" |
||||
testlog="#${progname}_3test.log" |
||||
packlog="#${progname}_4pack.log" |
||||
installlog="#${progname}_5install.log" |
||||
vflag=1 # verbose flag default to on. |
||||
config_summary=libhdf5.settings |
||||
exit_code=0 |
||||
|
||||
# This command should be in the source directory's bin/ |
||||
# and should have invoked as "$srcdir/bin/$progname" or |
||||
# "bin/$progname". So, by striping bin/$program from $0, |
||||
# we can find $srcdir. |
||||
if [ "$0" = "bin/${progname}" ]; then |
||||
srcdir="." # current directory |
||||
else |
||||
# $0 is $srdir/bin/$progname |
||||
srcdir=`echo $0 | sed -e s%/bin/$progname\$%%` |
||||
fi |
||||
# Sanity check |
||||
if [ ! -r $srcdir/bin/$progname ]; then |
||||
echo "encountered error while trying to find srcdir($srdir)" |
||||
exit 1 |
||||
fi |
||||
|
||||
# Cmake build options |
||||
cacheinit=$srcdir/config/cmake/cacheinit.cmake |
||||
build_cpp_lib=-DHDF5_BUILD_CPP_LIB:BOOL=OFF # C++ interface default off |
||||
build_fortran=-DHDF5_BUILD_FORTRAN:BOOL=OFF # Fortran interface default off |
||||
build_hl_lib=-DHDF5_BUILD_HL_LIB:BOOL=ON # High Level interface default on |
||||
build_threadsafe=-DHDF5_ENABLE_THREADSAFE:BOOL=OFF # Threadsafe feature default off |
||||
build_testing=-DBUILD_TESTING:BOOL=ON # Build tests default on |
||||
build_test_shell=-DTEST_SHELL_SCRIPTS:BOOL=ON # Run shell script tests default on |
||||
build_tools=-DHDF5_BUILD_TOOLS:BOOL=ON # Build tools default on |
||||
with_zlib=-DHDF5_ENABLE_Z_LIB_SUPPORT=ON # enable zlib filter default on |
||||
with_szlib=-DHDF5_ENABLE_SZIP_SUPPORT=OFF # enables szip filter default off |
||||
szlib_path="" # szip lib path default off |
||||
shared_lib=-DBUILD_SHARED_LIBS:BOOL=ON # enables shared lib; default on |
||||
njobs="" # number of jobs (commands) to |
||||
# run simultaneously; default is |
||||
# value from $MAKE if defined, |
||||
# otherwise none (1) |
||||
|
||||
#============= |
||||
# Function definitions |
||||
#============= |
||||
|
||||
# Show user brief help page |
||||
HELP_BRIEF() |
||||
{ |
||||
cat << EOF |
||||
Usage: $progname [options] |
||||
--help: shows details help page |
||||
EOF |
||||
} |
||||
|
||||
# Show user detail help page |
||||
HELP() |
||||
{ |
||||
cat << EOF |
||||
Usage: $progname [<options>] |
||||
where options are: |
||||
--enable-fortran | --disable-fortran: |
||||
enable or disable fortran API. Default is off. |
||||
--enable-cxx | --disable-cxx: |
||||
enable or disable c++ API. Default is off. |
||||
--enable-hl | --disable-hl: |
||||
enable or disable high level API. Default is on. |
||||
--enable-threadsafe | --disable-threadsafe: |
||||
enable or disable threadsafe feature. Default is off |
||||
--enable-shared | --disable-shared: |
||||
enable or disable shared lib. Default is on. |
||||
--enable-tools | --disable-tools: |
||||
enable or disable building tools. Default is on. |
||||
--enable-testing | --disable-testing: |
||||
enable or disable building tests. Default is on. |
||||
--with-zlib | --with-zlib=<libpath> | --without-zlib: |
||||
Use zlib library for external deflate I/O filter. Default is on. |
||||
--with-szlib | --with-szlib=<libpath> | --without-szlib: |
||||
Use szlib library for external deflate I/O filter. Default is on. |
||||
--njobs=<-j N>: |
||||
number of jobs (commands) to run simultaneously; default is value from |
||||
$MAKE if defined, otherwise none |
||||
--enable-verbose | --disable-verbose: |
||||
enable or disable verbose output. Default is on. |
||||
--help: shows details help page |
||||
|
||||
<libpath>: the file path to the library, expect <libpath>/lib and <libpath>/include. |
||||
EOF |
||||
} |
||||
|
||||
# Display a time stamp |
||||
TIMESTAMP() |
||||
{ |
||||
echo "=====" "`date`" "=====" |
||||
} |
||||
|
||||
|
||||
# Do one step bracketed with time stamps |
||||
# The '< /dev/null' is needed to prevent some applications like MPI |
||||
# jobs blocked for reading when they read stdin unnecessary. |
||||
# $1 is banner message to be displayed. |
||||
# $2 is command to run |
||||
# $3 is logfile name for saving output from the command |
||||
STEP() |
||||
{ |
||||
banner="$1" |
||||
command="$2" |
||||
logfile="$3" |
||||
|
||||
echo "$banner" with output saved in $logfile |
||||
(TIMESTAMP; nerror=0 ; |
||||
echo "eval $command" |
||||
eval $command || nerror=1 ; |
||||
TIMESTAMP; exit $nerror) < /dev/null > "$logfile" 2>&1 |
||||
if [ $? -ne 0 ]; then |
||||
echo "error in '$banner'. $progname aborted." |
||||
exit 1 |
||||
fi |
||||
} |
||||
|
||||
|
||||
# Install the generated installation image file. Different platform uses |
||||
# different image files. |
||||
# Linux: HDF5-<version>-Linux.sh file |
||||
# Mac OS X: Not implemented yet |
||||
# Others: Not implemented yet |
||||
INSTALL_HDF5() |
||||
{ |
||||
myos="`uname -s`" |
||||
case "$myos" in |
||||
Linux) |
||||
install_file=./HDF5-${version}-Linux.sh |
||||
$install_file --skip-license $* |
||||
;; |
||||
Darwin) # Mac OSX DMG file |
||||
# These steps were a kludge. Need proper support from Cmake engineering. |
||||
echo Darwin install step needs proper implementation. Quit. |
||||
return 1 |
||||
# |
||||
install_file=HDF5-${version}-Darwin.dmg |
||||
test -d hdf5 || mkdir hdf5 |
||||
basename=`basename $install_file .dmg` |
||||
# mount the DMG file as /Volumes/$basename |
||||
# echo 'Y' as yes for license. |
||||
echo Y | hdiutil mount $install_file |
||||
# copy the contents to the install location |
||||
cp -R "/Volumes/$basename/HDF_Group" hdf5 |
||||
# unmount the DMG file |
||||
hdiutil unmount /Volumes/$basename |
||||
;; |
||||
*) # unknown/unsupported OS. |
||||
echo "INSTALL_HDF5: Error--unknown/unsupported OS($myos)" |
||||
return 1 |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
|
||||
# Print logfiles. |
||||
# $*: logfiles |
||||
DUMP_LOGFILE() |
||||
{ |
||||
for x in $*; do |
||||
if [ -f $x ]; then |
||||
echo "==================================" |
||||
echo "Dumping $x" |
||||
echo "==================================" |
||||
cat $x |
||||
echo "==== END $x =====" |
||||
echo |
||||
fi |
||||
done |
||||
} |
||||
|
||||
|
||||
#========== |
||||
# main |
||||
#========== |
||||
|
||||
# Show a start time stamp |
||||
TIMESTAMP |
||||
|
||||
# Initialize njobs if $MAKE is defined |
||||
if [ -n "$MAKE" ]; then |
||||
# assume all arguments are for --jobs |
||||
njobs=`echo $MAKE | cut -s -d' ' -f2-` |
||||
fi |
||||
|
||||
# Parse Cmake configure options |
||||
# --enable-XXX or --disable-XXX will enable or disable feature XXX. |
||||
# XXX can be: |
||||
# fortran Fortran interface |
||||
# cxx C++ interface |
||||
# hl Highlevel interface |
||||
# testing Build tests |
||||
# tools Build tools |
||||
while [ $# -gt 0 ]; do |
||||
case "$1" in |
||||
--enable-fortran) |
||||
build_fortran=-DHDF5_BUILD_FORTRAN:BOOL=ON |
||||
;; |
||||
--disable-fortran) |
||||
build_fortran=-DHDF5_BUILD_FORTRAN:BOOL=OFF |
||||
;; |
||||
--enable-cxx) |
||||
build_cpp_lib=-DHDF5_BUILD_CPP_LIB:BOOL=ON |
||||
;; |
||||
--disable-cxx) |
||||
build_cpp_lib=-DHDF5_BUILD_CPP_LIB:BOOL=OFF |
||||
;; |
||||
--enable-hl) |
||||
build_hl_lib=-DHDF5_BUILD_HL_LIB:BOOL=ON |
||||
;; |
||||
--disable-hl) |
||||
build_hl_lib=-DHDF5_BUILD_HL_LIB:BOOL=OFF |
||||
;; |
||||
--enable-threadsafe) |
||||
build_threadsafe=-DHDF5_ENABLE_THREADSAFE:BOOL=ON |
||||
;; |
||||
--disable-threadsafe) |
||||
build_threadsafe=-DHDF5_ENABLE_THREADSAFE:BOOL=OFF |
||||
;; |
||||
--enable-shared) |
||||
shared_lib=-DBUILD_SHARED_LIBS:BOOL=ON |
||||
;; |
||||
--disable-shared) |
||||
shared_lib=-DBUILD_SHARED_LIBS:BOOL=OFF |
||||
;; |
||||
--enable-tools) |
||||
build_tools=-DHDF5_BUILD_TOOLS:BOOL=ON |
||||
;; |
||||
--disable-tools) |
||||
build_tools=-DHDF5_BUILD_TOOLS:BOOL=OFF |
||||
;; |
||||
--enable-testing) |
||||
build_testing=-DBUILD_TESTING:BOOL=ON |
||||
;; |
||||
--disable-testing) |
||||
build_testing=-DBUILD_TESTING:BOOL=OFF |
||||
;; |
||||
--enable-shell-testing) |
||||
build_test_shell=-DTEST_SHELL_SCRIPTS:BOOL=ON |
||||
;; |
||||
--disable-shell-testing) |
||||
build_test_shell=-DTEST_SHELL_SCRIPTS:BOOL=OFF |
||||
;; |
||||
--with-zlib) |
||||
with_zlib=-DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON |
||||
;; |
||||
--with-zlib=*) |
||||
xarg=`echo $1 | cut -d= -f2-` |
||||
with_zlib="-DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON -DZLIB_ROOT=$xarg" |
||||
;; |
||||
--without-zlib) |
||||
with_zlib=-DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=OFF |
||||
;; |
||||
--with-szlib) |
||||
with_szlib=-DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON |
||||
szlib_path="" # szlib is in default paths |
||||
;; |
||||
--with-szlib=*) |
||||
xarg=`echo $1 | cut -d= -f2-` |
||||
with_szlib="-DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON" |
||||
szlib_path="SZIP_INSTALL=$xarg" |
||||
;; |
||||
--without-szlib) |
||||
with_szlib=-DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF |
||||
szlib_path="" # reset the path |
||||
;; |
||||
--njobs=*) |
||||
njobs=`echo $1 | cut -d= -f2-` |
||||
;; |
||||
--enable-verbose) |
||||
vflag=1 |
||||
;; |
||||
--disable-verbose) |
||||
vflag=0 |
||||
;; |
||||
--help) |
||||
# print the detail help page and exit |
||||
HELP |
||||
exit 0 |
||||
;; |
||||
*) |
||||
echo "Unknown options: $1" |
||||
HELP |
||||
exit 1 |
||||
;; |
||||
esac |
||||
shift |
||||
done |
||||
$DPRINT after option parsing vflag=$vflag |
||||
|
||||
# Always display the brief help page |
||||
HELP_BRIEF |
||||
|
||||
# Verify there is a valid hdf5 source directory present |
||||
if [ ! -d $srcdir ]; then |
||||
echo $srcdir not found. Aborted. |
||||
exit 1 |
||||
fi |
||||
|
||||
# figure out version information |
||||
vers=bin/h5vers |
||||
if [ ! -x $srcdir/$vers ]; then |
||||
echo $srcdir/$vers not found or not executable. Aborted. |
||||
exit 1 |
||||
fi |
||||
version=`cd $srcdir; $vers` |
||||
if [ $? != 0 ]; then |
||||
echo $vers failed. Aborted. |
||||
exit 1 |
||||
fi |
||||
|
||||
# setup output of all the log files if verbose is on upon exit |
||||
trap \ |
||||
"if [ $vflag -ne 0 ]; then DUMP_LOGFILE \$configlog \$makelog \$testlog \$packlog \$installlog; fi" \ |
||||
0 |
||||
|
||||
echo Running Cmake for HDF5-${version} ... |
||||
# 4. Configure the C library, tools and tests with this command: |
||||
# If successful, append the configure summary to the configure logfile. |
||||
STEP "Configure..." \ |
||||
"env ${szlib_path} \ |
||||
cmake \ |
||||
-C $cacheinit \ |
||||
$build_cpp_lib \ |
||||
$build_fortran \ |
||||
$build_hl_lib \ |
||||
$build_threadsafe \ |
||||
$shared_lib \ |
||||
$build_testing \ |
||||
$build_test_shell \ |
||||
$build_tools \ |
||||
$with_zlib \ |
||||
$with_szlib \ |
||||
$srcdir" $configlog &&\ |
||||
cat $config_summary >> $configlog |
||||
|
||||
# 5. Build the C library, tools and tests with this command: |
||||
STEP "Build the library, tools and tests, ..." "cmake --build . --config Release -- $njobs" $makelog |
||||
|
||||
# 6. Test the C library and tools with this command: |
||||
STEP "Test the library and tools..." "ctest . -C Release $njobs" $testlog |
||||
|
||||
# 7. Create an install image with this command: |
||||
STEP "Create an install image..." "cpack -C Release CPackConfig.cmake" $packlog |
||||
|
||||
# The implementation of installation is incomplete (only works for linux). |
||||
# Screen it out for now till it is completed. |
||||
if false; then |
||||
# 8. Install with this command: |
||||
STEP "Install..." "INSTALL_HDF5" $installlog |
||||
fi |
||||
|
||||
# save the last exit code |
||||
exit_code=$? |
||||
|
||||
# Show a closing time stamp |
||||
TIMESTAMP |
||||
exit $exit_code |
||||
@ -0,0 +1,348 @@ |
||||
#! /bin/sh |
||||
# Wrapper for compilers which do not understand '-c -o'. |
||||
|
||||
scriptversion=2018-03-07.03; # UTC |
||||
|
||||
# Copyright (C) 1999-2020 Free Software Foundation, Inc. |
||||
# Written by Tom Tromey <tromey@cygnus.com>. |
||||
# |
||||
# This program is free software; you can redistribute it and/or modify |
||||
# it under the terms of the GNU General Public License as published by |
||||
# the Free Software Foundation; either version 2, or (at your option) |
||||
# any later version. |
||||
# |
||||
# This program is distributed in the hope that it will be useful, |
||||
# but WITHOUT ANY WARRANTY; without even the implied warranty of |
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
||||
# GNU General Public License for more details. |
||||
# |
||||
# You should have received a copy of the GNU General Public License |
||||
# along with this program. If not, see <https://www.gnu.org/licenses/>. |
||||
|
||||
# As a special exception to the GNU General Public License, if you |
||||
# distribute this file as part of a program that contains a |
||||
# configuration script generated by Autoconf, you may include it under |
||||
# the same distribution terms that you use for the rest of that program. |
||||
|
||||
# This file is maintained in Automake, please report |
||||
# bugs to <bug-automake@gnu.org> or send patches to |
||||
# <automake-patches@gnu.org>. |
||||
|
||||
nl=' |
||||
' |
||||
|
||||
# We need space, tab and new line, in precisely that order. Quoting is |
||||
# there to prevent tools from complaining about whitespace usage. |
||||
IFS=" "" $nl" |
||||
|
||||
file_conv= |
||||
|
||||
# func_file_conv build_file lazy |
||||
# Convert a $build file to $host form and store it in $file |
||||
# Currently only supports Windows hosts. If the determined conversion |
||||
# type is listed in (the comma separated) LAZY, no conversion will |
||||
# take place. |
||||
func_file_conv () |
||||
{ |
||||
file=$1 |
||||
case $file in |
||||
/ | /[!/]*) # absolute file, and not a UNC file |
||||
if test -z "$file_conv"; then |
||||
# lazily determine how to convert abs files |
||||
case `uname -s` in |
||||
MINGW*) |
||||
file_conv=mingw |
||||
;; |
||||
CYGWIN* | MSYS*) |
||||
file_conv=cygwin |
||||
;; |
||||
*) |
||||
file_conv=wine |
||||
;; |
||||
esac |
||||
fi |
||||
case $file_conv/,$2, in |
||||
*,$file_conv,*) |
||||
;; |
||||
mingw/*) |
||||
file=`cmd //C echo "$file " | sed -e 's/"\(.*\) " *$/\1/'` |
||||
;; |
||||
cygwin/* | msys/*) |
||||
file=`cygpath -m "$file" || echo "$file"` |
||||
;; |
||||
wine/*) |
||||
file=`winepath -w "$file" || echo "$file"` |
||||
;; |
||||
esac |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
# func_cl_dashL linkdir |
||||
# Make cl look for libraries in LINKDIR |
||||
func_cl_dashL () |
||||
{ |
||||
func_file_conv "$1" |
||||
if test -z "$lib_path"; then |
||||
lib_path=$file |
||||
else |
||||
lib_path="$lib_path;$file" |
||||
fi |
||||
linker_opts="$linker_opts -LIBPATH:$file" |
||||
} |
||||
|
||||
# func_cl_dashl library |
||||
# Do a library search-path lookup for cl |
||||
func_cl_dashl () |
||||
{ |
||||
lib=$1 |
||||
found=no |
||||
save_IFS=$IFS |
||||
IFS=';' |
||||
for dir in $lib_path $LIB |
||||
do |
||||
IFS=$save_IFS |
||||
if $shared && test -f "$dir/$lib.dll.lib"; then |
||||
found=yes |
||||
lib=$dir/$lib.dll.lib |
||||
break |
||||
fi |
||||
if test -f "$dir/$lib.lib"; then |
||||
found=yes |
||||
lib=$dir/$lib.lib |
||||
break |
||||
fi |
||||
if test -f "$dir/lib$lib.a"; then |
||||
found=yes |
||||
lib=$dir/lib$lib.a |
||||
break |
||||
fi |
||||
done |
||||
IFS=$save_IFS |
||||
|
||||
if test "$found" != yes; then |
||||
lib=$lib.lib |
||||
fi |
||||
} |
||||
|
||||
# func_cl_wrapper cl arg... |
||||
# Adjust compile command to suit cl |
||||
func_cl_wrapper () |
||||
{ |
||||
# Assume a capable shell |
||||
lib_path= |
||||
shared=: |
||||
linker_opts= |
||||
for arg |
||||
do |
||||
if test -n "$eat"; then |
||||
eat= |
||||
else |
||||
case $1 in |
||||
-o) |
||||
# configure might choose to run compile as 'compile cc -o foo foo.c'. |
||||
eat=1 |
||||
case $2 in |
||||
*.o | *.[oO][bB][jJ]) |
||||
func_file_conv "$2" |
||||
set x "$@" -Fo"$file" |
||||
shift |
||||
;; |
||||
*) |
||||
func_file_conv "$2" |
||||
set x "$@" -Fe"$file" |
||||
shift |
||||
;; |
||||
esac |
||||
;; |
||||
-I) |
||||
eat=1 |
||||
func_file_conv "$2" mingw |
||||
set x "$@" -I"$file" |
||||
shift |
||||
;; |
||||
-I*) |
||||
func_file_conv "${1#-I}" mingw |
||||
set x "$@" -I"$file" |
||||
shift |
||||
;; |
||||
-l) |
||||
eat=1 |
||||
func_cl_dashl "$2" |
||||
set x "$@" "$lib" |
||||
shift |
||||
;; |
||||
-l*) |
||||
func_cl_dashl "${1#-l}" |
||||
set x "$@" "$lib" |
||||
shift |
||||
;; |
||||
-L) |
||||
eat=1 |
||||
func_cl_dashL "$2" |
||||
;; |
||||
-L*) |
||||
func_cl_dashL "${1#-L}" |
||||
;; |
||||
-static) |
||||
shared=false |
||||
;; |
||||
-Wl,*) |
||||
arg=${1#-Wl,} |
||||
save_ifs="$IFS"; IFS=',' |
||||
for flag in $arg; do |
||||
IFS="$save_ifs" |
||||
linker_opts="$linker_opts $flag" |
||||
done |
||||
IFS="$save_ifs" |
||||
;; |
||||
-Xlinker) |
||||
eat=1 |
||||
linker_opts="$linker_opts $2" |
||||
;; |
||||
-*) |
||||
set x "$@" "$1" |
||||
shift |
||||
;; |
||||
*.cc | *.CC | *.cxx | *.CXX | *.[cC]++) |
||||
func_file_conv "$1" |
||||
set x "$@" -Tp"$file" |
||||
shift |
||||
;; |
||||
*.c | *.cpp | *.CPP | *.lib | *.LIB | *.Lib | *.OBJ | *.obj | *.[oO]) |
||||
func_file_conv "$1" mingw |
||||
set x "$@" "$file" |
||||
shift |
||||
;; |
||||
*) |
||||
set x "$@" "$1" |
||||
shift |
||||
;; |
||||
esac |
||||
fi |
||||
shift |
||||
done |
||||
if test -n "$linker_opts"; then |
||||
linker_opts="-link$linker_opts" |
||||
fi |
||||
exec "$@" $linker_opts |
||||
exit 1 |
||||
} |
||||
|
||||
eat= |
||||
|
||||
case $1 in |
||||
'') |
||||
echo "$0: No command. Try '$0 --help' for more information." 1>&2 |
||||
exit 1; |
||||
;; |
||||
-h | --h*) |
||||
cat <<\EOF |
||||
Usage: compile [--help] [--version] PROGRAM [ARGS] |
||||
|
||||
Wrapper for compilers which do not understand '-c -o'. |
||||
Remove '-o dest.o' from ARGS, run PROGRAM with the remaining |
||||
arguments, and rename the output as expected. |
||||
|
||||
If you are trying to build a whole package this is not the |
||||
right script to run: please start by reading the file 'INSTALL'. |
||||
|
||||
Report bugs to <bug-automake@gnu.org>. |
||||
EOF |
||||
exit $? |
||||
;; |
||||
-v | --v*) |
||||
echo "compile $scriptversion" |
||||
exit $? |
||||
;; |
||||
cl | *[/\\]cl | cl.exe | *[/\\]cl.exe | \ |
||||
icl | *[/\\]icl | icl.exe | *[/\\]icl.exe ) |
||||
func_cl_wrapper "$@" # Doesn't return... |
||||
;; |
||||
esac |
||||
|
||||
ofile= |
||||
cfile= |
||||
|
||||
for arg |
||||
do |
||||
if test -n "$eat"; then |
||||
eat= |
||||
else |
||||
case $1 in |
||||
-o) |
||||
# configure might choose to run compile as 'compile cc -o foo foo.c'. |
||||
# So we strip '-o arg' only if arg is an object. |
||||
eat=1 |
||||
case $2 in |
||||
*.o | *.obj) |
||||
ofile=$2 |
||||
;; |
||||
*) |
||||
set x "$@" -o "$2" |
||||
shift |
||||
;; |
||||
esac |
||||
;; |
||||
*.c) |
||||
cfile=$1 |
||||
set x "$@" "$1" |
||||
shift |
||||
;; |
||||
*) |
||||
set x "$@" "$1" |
||||
shift |
||||
;; |
||||
esac |
||||
fi |
||||
shift |
||||
done |
||||
|
||||
if test -z "$ofile" || test -z "$cfile"; then |
||||
# If no '-o' option was seen then we might have been invoked from a |
||||
# pattern rule where we don't need one. That is ok -- this is a |
||||
# normal compilation that the losing compiler can handle. If no |
||||
# '.c' file was seen then we are probably linking. That is also |
||||
# ok. |
||||
exec "$@" |
||||
fi |
||||
|
||||
# Name of file we expect compiler to create. |
||||
cofile=`echo "$cfile" | sed 's|^.*[\\/]||; s|^[a-zA-Z]:||; s/\.c$/.o/'` |
||||
|
||||
# Create the lock directory. |
||||
# Note: use '[/\\:.-]' here to ensure that we don't use the same name |
||||
# that we are using for the .o file. Also, base the name on the expected |
||||
# object file name, since that is what matters with a parallel build. |
||||
lockdir=`echo "$cofile" | sed -e 's|[/\\:.-]|_|g'`.d |
||||
while true; do |
||||
if mkdir "$lockdir" >/dev/null 2>&1; then |
||||
break |
||||
fi |
||||
sleep 1 |
||||
done |
||||
# FIXME: race condition here if user kills between mkdir and trap. |
||||
trap "rmdir '$lockdir'; exit 1" 1 2 15 |
||||
|
||||
# Run the compile. |
||||
"$@" |
||||
ret=$? |
||||
|
||||
if test -f "$cofile"; then |
||||
test "$cofile" = "$ofile" || mv "$cofile" "$ofile" |
||||
elif test -f "${cofile}bj"; then |
||||
test "${cofile}bj" = "$ofile" || mv "${cofile}bj" "$ofile" |
||||
fi |
||||
|
||||
rmdir "$lockdir" |
||||
exit $ret |
||||
|
||||
# Local Variables: |
||||
# mode: shell-script |
||||
# sh-indentation: 2 |
||||
# eval: (add-hook 'before-save-hook 'time-stamp) |
||||
# time-stamp-start: "scriptversion=" |
||||
# time-stamp-format: "%:y-%02m-%02d.%02H" |
||||
# time-stamp-time-zone: "UTC0" |
||||
# time-stamp-end: "; # UTC" |
||||
# End: |
||||
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,37 @@ |
||||
#!/usr/bin/env perl |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
require 5.003; |
||||
|
||||
# Looks for lines emitted by H5O_open() and H5O_close() and tries to |
||||
# determine which objects were not properly closed. |
||||
|
||||
while (<>) { |
||||
next unless /^([<>])(0x[\da-f]+|\d+)$/; |
||||
my ($op, $addr) = ($1, $2); |
||||
|
||||
if ($op eq ">") { |
||||
# Open object |
||||
$obj{$addr} += 1; |
||||
} else { |
||||
# Close object |
||||
die unless $obj{$addr}>0; |
||||
$obj{$addr} -= 1; |
||||
delete $obj{$addr} unless $obj{$addr}; |
||||
} |
||||
} |
||||
|
||||
for (sort keys %obj) { |
||||
printf "%3d %s\n", $obj{$_}, $_; |
||||
} |
||||
|
||||
exit 0; |
||||
@ -0,0 +1,791 @@ |
||||
#! /bin/sh |
||||
# depcomp - compile a program generating dependencies as side-effects |
||||
|
||||
scriptversion=2018-03-07.03; # UTC |
||||
|
||||
# Copyright (C) 1999-2020 Free Software Foundation, Inc. |
||||
|
||||
# This program is free software; you can redistribute it and/or modify |
||||
# it under the terms of the GNU General Public License as published by |
||||
# the Free Software Foundation; either version 2, or (at your option) |
||||
# any later version. |
||||
|
||||
# This program is distributed in the hope that it will be useful, |
||||
# but WITHOUT ANY WARRANTY; without even the implied warranty of |
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
||||
# GNU General Public License for more details. |
||||
|
||||
# You should have received a copy of the GNU General Public License |
||||
# along with this program. If not, see <https://www.gnu.org/licenses/>. |
||||
|
||||
# As a special exception to the GNU General Public License, if you |
||||
# distribute this file as part of a program that contains a |
||||
# configuration script generated by Autoconf, you may include it under |
||||
# the same distribution terms that you use for the rest of that program. |
||||
|
||||
# Originally written by Alexandre Oliva <oliva@dcc.unicamp.br>. |
||||
|
||||
case $1 in |
||||
'') |
||||
echo "$0: No command. Try '$0 --help' for more information." 1>&2 |
||||
exit 1; |
||||
;; |
||||
-h | --h*) |
||||
cat <<\EOF |
||||
Usage: depcomp [--help] [--version] PROGRAM [ARGS] |
||||
|
||||
Run PROGRAMS ARGS to compile a file, generating dependencies |
||||
as side-effects. |
||||
|
||||
Environment variables: |
||||
depmode Dependency tracking mode. |
||||
source Source file read by 'PROGRAMS ARGS'. |
||||
object Object file output by 'PROGRAMS ARGS'. |
||||
DEPDIR directory where to store dependencies. |
||||
depfile Dependency file to output. |
||||
tmpdepfile Temporary file to use when outputting dependencies. |
||||
libtool Whether libtool is used (yes/no). |
||||
|
||||
Report bugs to <bug-automake@gnu.org>. |
||||
EOF |
||||
exit $? |
||||
;; |
||||
-v | --v*) |
||||
echo "depcomp $scriptversion" |
||||
exit $? |
||||
;; |
||||
esac |
||||
|
||||
# Get the directory component of the given path, and save it in the |
||||
# global variables '$dir'. Note that this directory component will |
||||
# be either empty or ending with a '/' character. This is deliberate. |
||||
set_dir_from () |
||||
{ |
||||
case $1 in |
||||
*/*) dir=`echo "$1" | sed -e 's|/[^/]*$|/|'`;; |
||||
*) dir=;; |
||||
esac |
||||
} |
||||
|
||||
# Get the suffix-stripped basename of the given path, and save it the |
||||
# global variable '$base'. |
||||
set_base_from () |
||||
{ |
||||
base=`echo "$1" | sed -e 's|^.*/||' -e 's/\.[^.]*$//'` |
||||
} |
||||
|
||||
# If no dependency file was actually created by the compiler invocation, |
||||
# we still have to create a dummy depfile, to avoid errors with the |
||||
# Makefile "include basename.Plo" scheme. |
||||
make_dummy_depfile () |
||||
{ |
||||
echo "#dummy" > "$depfile" |
||||
} |
||||
|
||||
# Factor out some common post-processing of the generated depfile. |
||||
# Requires the auxiliary global variable '$tmpdepfile' to be set. |
||||
aix_post_process_depfile () |
||||
{ |
||||
# If the compiler actually managed to produce a dependency file, |
||||
# post-process it. |
||||
if test -f "$tmpdepfile"; then |
||||
# Each line is of the form 'foo.o: dependency.h'. |
||||
# Do two passes, one to just change these to |
||||
# $object: dependency.h |
||||
# and one to simply output |
||||
# dependency.h: |
||||
# which is needed to avoid the deleted-header problem. |
||||
{ sed -e "s,^.*\.[$lower]*:,$object:," < "$tmpdepfile" |
||||
sed -e "s,^.*\.[$lower]*:[$tab ]*,," -e 's,$,:,' < "$tmpdepfile" |
||||
} > "$depfile" |
||||
rm -f "$tmpdepfile" |
||||
else |
||||
make_dummy_depfile |
||||
fi |
||||
} |
||||
|
||||
# A tabulation character. |
||||
tab=' ' |
||||
# A newline character. |
||||
nl=' |
||||
' |
||||
# Character ranges might be problematic outside the C locale. |
||||
# These definitions help. |
||||
upper=ABCDEFGHIJKLMNOPQRSTUVWXYZ |
||||
lower=abcdefghijklmnopqrstuvwxyz |
||||
digits=0123456789 |
||||
alpha=${upper}${lower} |
||||
|
||||
if test -z "$depmode" || test -z "$source" || test -z "$object"; then |
||||
echo "depcomp: Variables source, object and depmode must be set" 1>&2 |
||||
exit 1 |
||||
fi |
||||
|
||||
# Dependencies for sub/bar.o or sub/bar.obj go into sub/.deps/bar.Po. |
||||
depfile=${depfile-`echo "$object" | |
||||
sed 's|[^\\/]*$|'${DEPDIR-.deps}'/&|;s|\.\([^.]*\)$|.P\1|;s|Pobj$|Po|'`} |
||||
tmpdepfile=${tmpdepfile-`echo "$depfile" | sed 's/\.\([^.]*\)$/.T\1/'`} |
||||
|
||||
rm -f "$tmpdepfile" |
||||
|
||||
# Avoid interferences from the environment. |
||||
gccflag= dashmflag= |
||||
|
||||
# Some modes work just like other modes, but use different flags. We |
||||
# parameterize here, but still list the modes in the big case below, |
||||
# to make depend.m4 easier to write. Note that we *cannot* use a case |
||||
# here, because this file can only contain one case statement. |
||||
if test "$depmode" = hp; then |
||||
# HP compiler uses -M and no extra arg. |
||||
gccflag=-M |
||||
depmode=gcc |
||||
fi |
||||
|
||||
if test "$depmode" = dashXmstdout; then |
||||
# This is just like dashmstdout with a different argument. |
||||
dashmflag=-xM |
||||
depmode=dashmstdout |
||||
fi |
||||
|
||||
cygpath_u="cygpath -u -f -" |
||||
if test "$depmode" = msvcmsys; then |
||||
# This is just like msvisualcpp but w/o cygpath translation. |
||||
# Just convert the backslash-escaped backslashes to single forward |
||||
# slashes to satisfy depend.m4 |
||||
cygpath_u='sed s,\\\\,/,g' |
||||
depmode=msvisualcpp |
||||
fi |
||||
|
||||
if test "$depmode" = msvc7msys; then |
||||
# This is just like msvc7 but w/o cygpath translation. |
||||
# Just convert the backslash-escaped backslashes to single forward |
||||
# slashes to satisfy depend.m4 |
||||
cygpath_u='sed s,\\\\,/,g' |
||||
depmode=msvc7 |
||||
fi |
||||
|
||||
if test "$depmode" = xlc; then |
||||
# IBM C/C++ Compilers xlc/xlC can output gcc-like dependency information. |
||||
gccflag=-qmakedep=gcc,-MF |
||||
depmode=gcc |
||||
fi |
||||
|
||||
case "$depmode" in |
||||
gcc3) |
||||
## gcc 3 implements dependency tracking that does exactly what |
||||
## we want. Yay! Note: for some reason libtool 1.4 doesn't like |
||||
## it if -MD -MP comes after the -MF stuff. Hmm. |
||||
## Unfortunately, FreeBSD c89 acceptance of flags depends upon |
||||
## the command line argument order; so add the flags where they |
||||
## appear in depend2.am. Note that the slowdown incurred here |
||||
## affects only configure: in makefiles, %FASTDEP% shortcuts this. |
||||
for arg |
||||
do |
||||
case $arg in |
||||
-c) set fnord "$@" -MT "$object" -MD -MP -MF "$tmpdepfile" "$arg" ;; |
||||
*) set fnord "$@" "$arg" ;; |
||||
esac |
||||
shift # fnord |
||||
shift # $arg |
||||
done |
||||
"$@" |
||||
stat=$? |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile" |
||||
exit $stat |
||||
fi |
||||
mv "$tmpdepfile" "$depfile" |
||||
;; |
||||
|
||||
gcc) |
||||
## Note that this doesn't just cater to obsosete pre-3.x GCC compilers. |
||||
## but also to in-use compilers like IMB xlc/xlC and the HP C compiler. |
||||
## (see the conditional assignment to $gccflag above). |
||||
## There are various ways to get dependency output from gcc. Here's |
||||
## why we pick this rather obscure method: |
||||
## - Don't want to use -MD because we'd like the dependencies to end |
||||
## up in a subdir. Having to rename by hand is ugly. |
||||
## (We might end up doing this anyway to support other compilers.) |
||||
## - The DEPENDENCIES_OUTPUT environment variable makes gcc act like |
||||
## -MM, not -M (despite what the docs say). Also, it might not be |
||||
## supported by the other compilers which use the 'gcc' depmode. |
||||
## - Using -M directly means running the compiler twice (even worse |
||||
## than renaming). |
||||
if test -z "$gccflag"; then |
||||
gccflag=-MD, |
||||
fi |
||||
"$@" -Wp,"$gccflag$tmpdepfile" |
||||
stat=$? |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile" |
||||
exit $stat |
||||
fi |
||||
rm -f "$depfile" |
||||
echo "$object : \\" > "$depfile" |
||||
# The second -e expression handles DOS-style file names with drive |
||||
# letters. |
||||
sed -e 's/^[^:]*: / /' \ |
||||
-e 's/^['$alpha']:\/[^:]*: / /' < "$tmpdepfile" >> "$depfile" |
||||
## This next piece of magic avoids the "deleted header file" problem. |
||||
## The problem is that when a header file which appears in a .P file |
||||
## is deleted, the dependency causes make to die (because there is |
||||
## typically no way to rebuild the header). We avoid this by adding |
||||
## dummy dependencies for each header file. Too bad gcc doesn't do |
||||
## this for us directly. |
||||
## Some versions of gcc put a space before the ':'. On the theory |
||||
## that the space means something, we add a space to the output as |
||||
## well. hp depmode also adds that space, but also prefixes the VPATH |
||||
## to the object. Take care to not repeat it in the output. |
||||
## Some versions of the HPUX 10.20 sed can't process this invocation |
||||
## correctly. Breaking it into two sed invocations is a workaround. |
||||
tr ' ' "$nl" < "$tmpdepfile" \ |
||||
| sed -e 's/^\\$//' -e '/^$/d' -e "s|.*$object$||" -e '/:$/d' \ |
||||
| sed -e 's/$/ :/' >> "$depfile" |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
hp) |
||||
# This case exists only to let depend.m4 do its work. It works by |
||||
# looking at the text of this script. This case will never be run, |
||||
# since it is checked for above. |
||||
exit 1 |
||||
;; |
||||
|
||||
sgi) |
||||
if test "$libtool" = yes; then |
||||
"$@" "-Wp,-MDupdate,$tmpdepfile" |
||||
else |
||||
"$@" -MDupdate "$tmpdepfile" |
||||
fi |
||||
stat=$? |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile" |
||||
exit $stat |
||||
fi |
||||
rm -f "$depfile" |
||||
|
||||
if test -f "$tmpdepfile"; then # yes, the sourcefile depend on other files |
||||
echo "$object : \\" > "$depfile" |
||||
# Clip off the initial element (the dependent). Don't try to be |
||||
# clever and replace this with sed code, as IRIX sed won't handle |
||||
# lines with more than a fixed number of characters (4096 in |
||||
# IRIX 6.2 sed, 8192 in IRIX 6.5). We also remove comment lines; |
||||
# the IRIX cc adds comments like '#:fec' to the end of the |
||||
# dependency line. |
||||
tr ' ' "$nl" < "$tmpdepfile" \ |
||||
| sed -e 's/^.*\.o://' -e 's/#.*$//' -e '/^$/ d' \ |
||||
| tr "$nl" ' ' >> "$depfile" |
||||
echo >> "$depfile" |
||||
# The second pass generates a dummy entry for each header file. |
||||
tr ' ' "$nl" < "$tmpdepfile" \ |
||||
| sed -e 's/^.*\.o://' -e 's/#.*$//' -e '/^$/ d' -e 's/$/:/' \ |
||||
>> "$depfile" |
||||
else |
||||
make_dummy_depfile |
||||
fi |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
xlc) |
||||
# This case exists only to let depend.m4 do its work. It works by |
||||
# looking at the text of this script. This case will never be run, |
||||
# since it is checked for above. |
||||
exit 1 |
||||
;; |
||||
|
||||
aix) |
||||
# The C for AIX Compiler uses -M and outputs the dependencies |
||||
# in a .u file. In older versions, this file always lives in the |
||||
# current directory. Also, the AIX compiler puts '$object:' at the |
||||
# start of each line; $object doesn't have directory information. |
||||
# Version 6 uses the directory in both cases. |
||||
set_dir_from "$object" |
||||
set_base_from "$object" |
||||
if test "$libtool" = yes; then |
||||
tmpdepfile1=$dir$base.u |
||||
tmpdepfile2=$base.u |
||||
tmpdepfile3=$dir.libs/$base.u |
||||
"$@" -Wc,-M |
||||
else |
||||
tmpdepfile1=$dir$base.u |
||||
tmpdepfile2=$dir$base.u |
||||
tmpdepfile3=$dir$base.u |
||||
"$@" -M |
||||
fi |
||||
stat=$? |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" |
||||
exit $stat |
||||
fi |
||||
|
||||
for tmpdepfile in "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" |
||||
do |
||||
test -f "$tmpdepfile" && break |
||||
done |
||||
aix_post_process_depfile |
||||
;; |
||||
|
||||
tcc) |
||||
# tcc (Tiny C Compiler) understand '-MD -MF file' since version 0.9.26 |
||||
# FIXME: That version still under development at the moment of writing. |
||||
# Make that this statement remains true also for stable, released |
||||
# versions. |
||||
# It will wrap lines (doesn't matter whether long or short) with a |
||||
# trailing '\', as in: |
||||
# |
||||
# foo.o : \ |
||||
# foo.c \ |
||||
# foo.h \ |
||||
# |
||||
# It will put a trailing '\' even on the last line, and will use leading |
||||
# spaces rather than leading tabs (at least since its commit 0394caf7 |
||||
# "Emit spaces for -MD"). |
||||
"$@" -MD -MF "$tmpdepfile" |
||||
stat=$? |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile" |
||||
exit $stat |
||||
fi |
||||
rm -f "$depfile" |
||||
# Each non-empty line is of the form 'foo.o : \' or ' dep.h \'. |
||||
# We have to change lines of the first kind to '$object: \'. |
||||
sed -e "s|.*:|$object :|" < "$tmpdepfile" > "$depfile" |
||||
# And for each line of the second kind, we have to emit a 'dep.h:' |
||||
# dummy dependency, to avoid the deleted-header problem. |
||||
sed -n -e 's|^ *\(.*\) *\\$|\1:|p' < "$tmpdepfile" >> "$depfile" |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
## The order of this option in the case statement is important, since the |
||||
## shell code in configure will try each of these formats in the order |
||||
## listed in this file. A plain '-MD' option would be understood by many |
||||
## compilers, so we must ensure this comes after the gcc and icc options. |
||||
pgcc) |
||||
# Portland's C compiler understands '-MD'. |
||||
# Will always output deps to 'file.d' where file is the root name of the |
||||
# source file under compilation, even if file resides in a subdirectory. |
||||
# The object file name does not affect the name of the '.d' file. |
||||
# pgcc 10.2 will output |
||||
# foo.o: sub/foo.c sub/foo.h |
||||
# and will wrap long lines using '\' : |
||||
# foo.o: sub/foo.c ... \ |
||||
# sub/foo.h ... \ |
||||
# ... |
||||
set_dir_from "$object" |
||||
# Use the source, not the object, to determine the base name, since |
||||
# that's sadly what pgcc will do too. |
||||
set_base_from "$source" |
||||
tmpdepfile=$base.d |
||||
|
||||
# For projects that build the same source file twice into different object |
||||
# files, the pgcc approach of using the *source* file root name can cause |
||||
# problems in parallel builds. Use a locking strategy to avoid stomping on |
||||
# the same $tmpdepfile. |
||||
lockdir=$base.d-lock |
||||
trap " |
||||
echo '$0: caught signal, cleaning up...' >&2 |
||||
rmdir '$lockdir' |
||||
exit 1 |
||||
" 1 2 13 15 |
||||
numtries=100 |
||||
i=$numtries |
||||
while test $i -gt 0; do |
||||
# mkdir is a portable test-and-set. |
||||
if mkdir "$lockdir" 2>/dev/null; then |
||||
# This process acquired the lock. |
||||
"$@" -MD |
||||
stat=$? |
||||
# Release the lock. |
||||
rmdir "$lockdir" |
||||
break |
||||
else |
||||
# If the lock is being held by a different process, wait |
||||
# until the winning process is done or we timeout. |
||||
while test -d "$lockdir" && test $i -gt 0; do |
||||
sleep 1 |
||||
i=`expr $i - 1` |
||||
done |
||||
fi |
||||
i=`expr $i - 1` |
||||
done |
||||
trap - 1 2 13 15 |
||||
if test $i -le 0; then |
||||
echo "$0: failed to acquire lock after $numtries attempts" >&2 |
||||
echo "$0: check lockdir '$lockdir'" >&2 |
||||
exit 1 |
||||
fi |
||||
|
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile" |
||||
exit $stat |
||||
fi |
||||
rm -f "$depfile" |
||||
# Each line is of the form `foo.o: dependent.h', |
||||
# or `foo.o: dep1.h dep2.h \', or ` dep3.h dep4.h \'. |
||||
# Do two passes, one to just change these to |
||||
# `$object: dependent.h' and one to simply `dependent.h:'. |
||||
sed "s,^[^:]*:,$object :," < "$tmpdepfile" > "$depfile" |
||||
# Some versions of the HPUX 10.20 sed can't process this invocation |
||||
# correctly. Breaking it into two sed invocations is a workaround. |
||||
sed 's,^[^:]*: \(.*\)$,\1,;s/^\\$//;/^$/d;/:$/d' < "$tmpdepfile" \ |
||||
| sed -e 's/$/ :/' >> "$depfile" |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
hp2) |
||||
# The "hp" stanza above does not work with aCC (C++) and HP's ia64 |
||||
# compilers, which have integrated preprocessors. The correct option |
||||
# to use with these is +Maked; it writes dependencies to a file named |
||||
# 'foo.d', which lands next to the object file, wherever that |
||||
# happens to be. |
||||
# Much of this is similar to the tru64 case; see comments there. |
||||
set_dir_from "$object" |
||||
set_base_from "$object" |
||||
if test "$libtool" = yes; then |
||||
tmpdepfile1=$dir$base.d |
||||
tmpdepfile2=$dir.libs/$base.d |
||||
"$@" -Wc,+Maked |
||||
else |
||||
tmpdepfile1=$dir$base.d |
||||
tmpdepfile2=$dir$base.d |
||||
"$@" +Maked |
||||
fi |
||||
stat=$? |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile1" "$tmpdepfile2" |
||||
exit $stat |
||||
fi |
||||
|
||||
for tmpdepfile in "$tmpdepfile1" "$tmpdepfile2" |
||||
do |
||||
test -f "$tmpdepfile" && break |
||||
done |
||||
if test -f "$tmpdepfile"; then |
||||
sed -e "s,^.*\.[$lower]*:,$object:," "$tmpdepfile" > "$depfile" |
||||
# Add 'dependent.h:' lines. |
||||
sed -ne '2,${ |
||||
s/^ *// |
||||
s/ \\*$// |
||||
s/$/:/ |
||||
p |
||||
}' "$tmpdepfile" >> "$depfile" |
||||
else |
||||
make_dummy_depfile |
||||
fi |
||||
rm -f "$tmpdepfile" "$tmpdepfile2" |
||||
;; |
||||
|
||||
tru64) |
||||
# The Tru64 compiler uses -MD to generate dependencies as a side |
||||
# effect. 'cc -MD -o foo.o ...' puts the dependencies into 'foo.o.d'. |
||||
# At least on Alpha/Redhat 6.1, Compaq CCC V6.2-504 seems to put |
||||
# dependencies in 'foo.d' instead, so we check for that too. |
||||
# Subdirectories are respected. |
||||
set_dir_from "$object" |
||||
set_base_from "$object" |
||||
|
||||
if test "$libtool" = yes; then |
||||
# Libtool generates 2 separate objects for the 2 libraries. These |
||||
# two compilations output dependencies in $dir.libs/$base.o.d and |
||||
# in $dir$base.o.d. We have to check for both files, because |
||||
# one of the two compilations can be disabled. We should prefer |
||||
# $dir$base.o.d over $dir.libs/$base.o.d because the latter is |
||||
# automatically cleaned when .libs/ is deleted, while ignoring |
||||
# the former would cause a distcleancheck panic. |
||||
tmpdepfile1=$dir$base.o.d # libtool 1.5 |
||||
tmpdepfile2=$dir.libs/$base.o.d # Likewise. |
||||
tmpdepfile3=$dir.libs/$base.d # Compaq CCC V6.2-504 |
||||
"$@" -Wc,-MD |
||||
else |
||||
tmpdepfile1=$dir$base.d |
||||
tmpdepfile2=$dir$base.d |
||||
tmpdepfile3=$dir$base.d |
||||
"$@" -MD |
||||
fi |
||||
|
||||
stat=$? |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" |
||||
exit $stat |
||||
fi |
||||
|
||||
for tmpdepfile in "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" |
||||
do |
||||
test -f "$tmpdepfile" && break |
||||
done |
||||
# Same post-processing that is required for AIX mode. |
||||
aix_post_process_depfile |
||||
;; |
||||
|
||||
msvc7) |
||||
if test "$libtool" = yes; then |
||||
showIncludes=-Wc,-showIncludes |
||||
else |
||||
showIncludes=-showIncludes |
||||
fi |
||||
"$@" $showIncludes > "$tmpdepfile" |
||||
stat=$? |
||||
grep -v '^Note: including file: ' "$tmpdepfile" |
||||
if test $stat -ne 0; then |
||||
rm -f "$tmpdepfile" |
||||
exit $stat |
||||
fi |
||||
rm -f "$depfile" |
||||
echo "$object : \\" > "$depfile" |
||||
# The first sed program below extracts the file names and escapes |
||||
# backslashes for cygpath. The second sed program outputs the file |
||||
# name when reading, but also accumulates all include files in the |
||||
# hold buffer in order to output them again at the end. This only |
||||
# works with sed implementations that can handle large buffers. |
||||
sed < "$tmpdepfile" -n ' |
||||
/^Note: including file: *\(.*\)/ { |
||||
s//\1/ |
||||
s/\\/\\\\/g |
||||
p |
||||
}' | $cygpath_u | sort -u | sed -n ' |
||||
s/ /\\ /g |
||||
s/\(.*\)/'"$tab"'\1 \\/p |
||||
s/.\(.*\) \\/\1:/ |
||||
H |
||||
$ { |
||||
s/.*/'"$tab"'/ |
||||
G |
||||
p |
||||
}' >> "$depfile" |
||||
echo >> "$depfile" # make sure the fragment doesn't end with a backslash |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
msvc7msys) |
||||
# This case exists only to let depend.m4 do its work. It works by |
||||
# looking at the text of this script. This case will never be run, |
||||
# since it is checked for above. |
||||
exit 1 |
||||
;; |
||||
|
||||
#nosideeffect) |
||||
# This comment above is used by automake to tell side-effect |
||||
# dependency tracking mechanisms from slower ones. |
||||
|
||||
dashmstdout) |
||||
# Important note: in order to support this mode, a compiler *must* |
||||
# always write the preprocessed file to stdout, regardless of -o. |
||||
"$@" || exit $? |
||||
|
||||
# Remove the call to Libtool. |
||||
if test "$libtool" = yes; then |
||||
while test "X$1" != 'X--mode=compile'; do |
||||
shift |
||||
done |
||||
shift |
||||
fi |
||||
|
||||
# Remove '-o $object'. |
||||
IFS=" " |
||||
for arg |
||||
do |
||||
case $arg in |
||||
-o) |
||||
shift |
||||
;; |
||||
$object) |
||||
shift |
||||
;; |
||||
*) |
||||
set fnord "$@" "$arg" |
||||
shift # fnord |
||||
shift # $arg |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
test -z "$dashmflag" && dashmflag=-M |
||||
# Require at least two characters before searching for ':' |
||||
# in the target name. This is to cope with DOS-style filenames: |
||||
# a dependency such as 'c:/foo/bar' could be seen as target 'c' otherwise. |
||||
"$@" $dashmflag | |
||||
sed "s|^[$tab ]*[^:$tab ][^:][^:]*:[$tab ]*|$object: |" > "$tmpdepfile" |
||||
rm -f "$depfile" |
||||
cat < "$tmpdepfile" > "$depfile" |
||||
# Some versions of the HPUX 10.20 sed can't process this sed invocation |
||||
# correctly. Breaking it into two sed invocations is a workaround. |
||||
tr ' ' "$nl" < "$tmpdepfile" \ |
||||
| sed -e 's/^\\$//' -e '/^$/d' -e '/:$/d' \ |
||||
| sed -e 's/$/ :/' >> "$depfile" |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
dashXmstdout) |
||||
# This case only exists to satisfy depend.m4. It is never actually |
||||
# run, as this mode is specially recognized in the preamble. |
||||
exit 1 |
||||
;; |
||||
|
||||
makedepend) |
||||
"$@" || exit $? |
||||
# Remove any Libtool call |
||||
if test "$libtool" = yes; then |
||||
while test "X$1" != 'X--mode=compile'; do |
||||
shift |
||||
done |
||||
shift |
||||
fi |
||||
# X makedepend |
||||
shift |
||||
cleared=no eat=no |
||||
for arg |
||||
do |
||||
case $cleared in |
||||
no) |
||||
set ""; shift |
||||
cleared=yes ;; |
||||
esac |
||||
if test $eat = yes; then |
||||
eat=no |
||||
continue |
||||
fi |
||||
case "$arg" in |
||||
-D*|-I*) |
||||
set fnord "$@" "$arg"; shift ;; |
||||
# Strip any option that makedepend may not understand. Remove |
||||
# the object too, otherwise makedepend will parse it as a source file. |
||||
-arch) |
||||
eat=yes ;; |
||||
-*|$object) |
||||
;; |
||||
*) |
||||
set fnord "$@" "$arg"; shift ;; |
||||
esac |
||||
done |
||||
obj_suffix=`echo "$object" | sed 's/^.*\././'` |
||||
touch "$tmpdepfile" |
||||
${MAKEDEPEND-makedepend} -o"$obj_suffix" -f"$tmpdepfile" "$@" |
||||
rm -f "$depfile" |
||||
# makedepend may prepend the VPATH from the source file name to the object. |
||||
# No need to regex-escape $object, excess matching of '.' is harmless. |
||||
sed "s|^.*\($object *:\)|\1|" "$tmpdepfile" > "$depfile" |
||||
# Some versions of the HPUX 10.20 sed can't process the last invocation |
||||
# correctly. Breaking it into two sed invocations is a workaround. |
||||
sed '1,2d' "$tmpdepfile" \ |
||||
| tr ' ' "$nl" \ |
||||
| sed -e 's/^\\$//' -e '/^$/d' -e '/:$/d' \ |
||||
| sed -e 's/$/ :/' >> "$depfile" |
||||
rm -f "$tmpdepfile" "$tmpdepfile".bak |
||||
;; |
||||
|
||||
cpp) |
||||
# Important note: in order to support this mode, a compiler *must* |
||||
# always write the preprocessed file to stdout. |
||||
"$@" || exit $? |
||||
|
||||
# Remove the call to Libtool. |
||||
if test "$libtool" = yes; then |
||||
while test "X$1" != 'X--mode=compile'; do |
||||
shift |
||||
done |
||||
shift |
||||
fi |
||||
|
||||
# Remove '-o $object'. |
||||
IFS=" " |
||||
for arg |
||||
do |
||||
case $arg in |
||||
-o) |
||||
shift |
||||
;; |
||||
$object) |
||||
shift |
||||
;; |
||||
*) |
||||
set fnord "$@" "$arg" |
||||
shift # fnord |
||||
shift # $arg |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
"$@" -E \ |
||||
| sed -n -e '/^# [0-9][0-9]* "\([^"]*\)".*/ s:: \1 \\:p' \ |
||||
-e '/^#line [0-9][0-9]* "\([^"]*\)".*/ s:: \1 \\:p' \ |
||||
| sed '$ s: \\$::' > "$tmpdepfile" |
||||
rm -f "$depfile" |
||||
echo "$object : \\" > "$depfile" |
||||
cat < "$tmpdepfile" >> "$depfile" |
||||
sed < "$tmpdepfile" '/^$/d;s/^ //;s/ \\$//;s/$/ :/' >> "$depfile" |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
msvisualcpp) |
||||
# Important note: in order to support this mode, a compiler *must* |
||||
# always write the preprocessed file to stdout. |
||||
"$@" || exit $? |
||||
|
||||
# Remove the call to Libtool. |
||||
if test "$libtool" = yes; then |
||||
while test "X$1" != 'X--mode=compile'; do |
||||
shift |
||||
done |
||||
shift |
||||
fi |
||||
|
||||
IFS=" " |
||||
for arg |
||||
do |
||||
case "$arg" in |
||||
-o) |
||||
shift |
||||
;; |
||||
$object) |
||||
shift |
||||
;; |
||||
"-Gm"|"/Gm"|"-Gi"|"/Gi"|"-ZI"|"/ZI") |
||||
set fnord "$@" |
||||
shift |
||||
shift |
||||
;; |
||||
*) |
||||
set fnord "$@" "$arg" |
||||
shift |
||||
shift |
||||
;; |
||||
esac |
||||
done |
||||
"$@" -E 2>/dev/null | |
||||
sed -n '/^#line [0-9][0-9]* "\([^"]*\)"/ s::\1:p' | $cygpath_u | sort -u > "$tmpdepfile" |
||||
rm -f "$depfile" |
||||
echo "$object : \\" > "$depfile" |
||||
sed < "$tmpdepfile" -n -e 's% %\\ %g' -e '/^\(.*\)$/ s::'"$tab"'\1 \\:p' >> "$depfile" |
||||
echo "$tab" >> "$depfile" |
||||
sed < "$tmpdepfile" -n -e 's% %\\ %g' -e '/^\(.*\)$/ s::\1\::p' >> "$depfile" |
||||
rm -f "$tmpdepfile" |
||||
;; |
||||
|
||||
msvcmsys) |
||||
# This case exists only to let depend.m4 do its work. It works by |
||||
# looking at the text of this script. This case will never be run, |
||||
# since it is checked for above. |
||||
exit 1 |
||||
;; |
||||
|
||||
none) |
||||
exec "$@" |
||||
;; |
||||
|
||||
*) |
||||
echo "Unknown depmode $depmode" 1>&2 |
||||
exit 1 |
||||
;; |
||||
esac |
||||
|
||||
exit 0 |
||||
|
||||
# Local Variables: |
||||
# mode: shell-script |
||||
# sh-indentation: 2 |
||||
# eval: (add-hook 'before-save-hook 'time-stamp) |
||||
# time-stamp-start: "scriptversion=" |
||||
# time-stamp-format: "%:y-%02m-%02d.%02H" |
||||
# time-stamp-time-zone: "UTC0" |
||||
# time-stamp-end: "; # UTC" |
||||
# End: |
||||
@ -0,0 +1,26 @@ |
||||
#!/bin/bash |
||||
# |
||||
# Recursively format all C & C++ sources and header files, except those in the |
||||
# 'config' directory and generated files, such as H5LTanalyze.c, etc. |
||||
# |
||||
# Note that any files or directories that are excluded here should also be |
||||
# added to the 'exclude' list in .github/workflows/clang-format-check.yml |
||||
# |
||||
# (Remember to update both bin/format_source and bin/format_source_patch) |
||||
|
||||
find . \( -type d -path ./config -prune -and -not -path ./config \) \ |
||||
-or \( \( \! \( \ |
||||
-name H5LTanalyze.c \ |
||||
-or -name H5LTparse.c \ |
||||
-or -name H5LTparse.h \ |
||||
-or -name H5Epubgen.h \ |
||||
-or -name H5Einit.h \ |
||||
-or -name H5Eterm.h \ |
||||
-or -name H5Edefin.h \ |
||||
-or -name H5version.h \ |
||||
-or -name H5overflow.h \ |
||||
\) \) \ |
||||
-and \( -iname *.h -or -iname *.c -or -iname *.cpp -or -iname *.hpp -or -iname *.java \) \) \ |
||||
| xargs -P0 -n1 clang-format -style=file -i -fallback-style=none |
||||
|
||||
exit 0 |
||||
@ -0,0 +1,265 @@ |
||||
#! /bin/bash |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# This script runs flex/lex and bison/yacc to generate parser code for |
||||
# the high-level library. It used to be a part of autogen.sh, but many |
||||
# people encountered problems with installing flex and bison on their |
||||
# system and the parser code rarely changes, so those parts of the |
||||
# script were moved to their own file. |
||||
# |
||||
# NOTE CAREFULLY! |
||||
# |
||||
# There is NO dependency in either the autotools or CMake to regenerate |
||||
# the parser code. If you modify H5LT analyze.l or H5LTparse.y, you |
||||
# will need to run this script manually on a system with a suitable |
||||
# lexer and parser generator. |
||||
# |
||||
# IMPORTANT OS X NOTE |
||||
# |
||||
# If you are using OS X, you will probably not have flex or bison |
||||
# installed. In addition, even if you do have bison installed, the bison |
||||
# version you have installed may also have a bug that makes it unable to |
||||
# process our input files. |
||||
# |
||||
# The easiest way to fix this is to install everything via Homebrew: |
||||
# |
||||
# http://brew.sh/ |
||||
# |
||||
# After you install the base packages, install flex/bison. |
||||
# |
||||
# brew install flex |
||||
# brew install bison |
||||
# |
||||
# END IMPORTANT OS X NOTE |
||||
# |
||||
# If you want to use a particular version of flex or bison, the paths |
||||
# to each tool can be overridden using the following environment |
||||
# variables: |
||||
# |
||||
# HDF5_FLEX |
||||
# HDF5_BISON |
||||
# |
||||
# This script takes two potential options: |
||||
# |
||||
# -p |
||||
# |
||||
# When this is selected, the flex/bison versions are set to the paths |
||||
# and versions used by The HDF Group to produce the released versions |
||||
# of the library. |
||||
# |
||||
# NOTE: This is probably temporary. Once we update our dev machines |
||||
# to have recent versions of the autotools this option will probably |
||||
# be removed. |
||||
# |
||||
# -v |
||||
# |
||||
# This emits some extra information, mainly tool versions. |
||||
|
||||
echo |
||||
echo "*******************************************" |
||||
echo "* HDF5 high-level parser generator script *" |
||||
echo "*******************************************" |
||||
echo |
||||
|
||||
# Default is not verbose output |
||||
verbose=false |
||||
|
||||
optspec=":hpv-" |
||||
while getopts "$optspec" optchar; do |
||||
case "${optchar}" in |
||||
h) |
||||
echo "usage: $0 [OPTIONS] /path/to/hl/src/directory" |
||||
echo |
||||
echo " -h Print this help message." |
||||
echo |
||||
echo " -p Used by THG to use hard-codes flex/bison" |
||||
echo " paths on THG machines. Not for non-HDF-Group" |
||||
echo " users!" |
||||
echo |
||||
echo " -v Show more verbose output." |
||||
echo |
||||
echo " NOTE: Each tool can be set via an environment variable." |
||||
echo " These are documented inside this script." |
||||
echo |
||||
exit 0 |
||||
;; |
||||
p) |
||||
echo "Setting THG production mode..." |
||||
echo |
||||
production=true |
||||
;; |
||||
v) |
||||
echo "Setting verbosity: high" |
||||
echo |
||||
verbose=true |
||||
;; |
||||
*) |
||||
if [ "$OPTERR" != 1 ] || [ "${optspec:0:1}" = ":" ]; then |
||||
echo "Non-option argument: '-${OPTARG}'" >&2 |
||||
fi |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# Get the path to the hl src directory |
||||
shift $(($OPTIND - 1)) |
||||
path_to_hl_src=$1 |
||||
if test -z ${path_to_hl_src}; then |
||||
echo "*** ERROR *** - Path to hl/src not set" |
||||
echo "Please add the path to the hl/src directory as a parameter" |
||||
echo "See $0 -h for more help." |
||||
echo |
||||
exit -1 |
||||
fi |
||||
|
||||
if [ "$production" = true ] ; then |
||||
|
||||
# Production mode |
||||
# |
||||
# Hard-code canonical HDF Group tool locations. |
||||
|
||||
# If paths to tools are not specified, assume they are |
||||
# located in /usr/hdf/bin/AUTOTOOLS and set paths accordingly. |
||||
if test -z ${HDF5_BISON}; then |
||||
HDF5_BISON=/usr/hdf/bin/AUTOTOOLS/bison |
||||
fi |
||||
if test -z ${HDF5_FLEX}; then |
||||
HDF5_FLEX=/usr/hdf/bin/AUTOTOOLS/flex |
||||
fi |
||||
|
||||
else |
||||
|
||||
# Not in production mode |
||||
# |
||||
# If paths to autotools are not specified, use whatever the system |
||||
# has installed as the default. We use 'which <tool>' to |
||||
# show exactly what's being used. |
||||
if test -z ${HDF5_BISON}; then |
||||
HDF5_BISON=$(which bison) |
||||
fi |
||||
if test -z ${HDF5_FLEX}; then |
||||
HDF5_FLEX=$(which flex) |
||||
fi |
||||
|
||||
fi # production |
||||
|
||||
# Make sure that these versions of the tools are in the path |
||||
BISON_DIR=`dirname ${HDF5_BISON}` |
||||
FLEX_DIR=`dirname ${HDF5_FLEX}` |
||||
PATH=${FLEX_DIR}:${BISON_DIR}:$PATH |
||||
|
||||
# Run flex and bison |
||||
# automatically generates hl/src/H5LTanalyze.c and hl/src/H5LTparse.c |
||||
# Note that, as of Xcode 6.1 (2015), the default bison version on OS X |
||||
# is old enough to have the circular dependency bug. You'll have |
||||
# to install a later version of bison. See the OS X note at the top |
||||
# of this script. |
||||
echo |
||||
echo "Generating H5LT parser code (requires yacc/bison):" |
||||
echo "Generate hl/src/H5LTparse.c from hl/src/H5LTparse.y" |
||||
# HDF5_BISON is set via the environment or 'which bison', above |
||||
if test -z ${HDF5_BISON}; then |
||||
echo |
||||
echo "*************************" |
||||
echo " ERROR - bison not found" |
||||
echo "*************************" |
||||
echo "bison is required to generate parser code in H5LT" |
||||
echo |
||||
exit 127 |
||||
fi |
||||
if [ "$verbose" = true ] ; then |
||||
${HDF5_BISON} --version |
||||
fi |
||||
${HDF5_BISON} -pH5LTyy -o ${path_to_hl_src}/H5LTparse.c -d ${path_to_hl_src}/H5LTparse.y |
||||
|
||||
echo |
||||
echo "Generating H5LT lexer code (requires lex/flex):" |
||||
echo "Generate hl/src/H5LTanalyze.c from hl/src/H5LTanalyze.l" |
||||
# HDF5_FLEX is set via the environment or 'which flex', above |
||||
if test -z ${HDF5_FLEX}; then |
||||
echo |
||||
echo "************************" |
||||
echo " ERROR - flex not found" |
||||
echo "************************" |
||||
echo "flex is required to generate lexer code in H5LT" |
||||
echo |
||||
exit 127 |
||||
fi |
||||
if [ "$verbose" = true ] ; then |
||||
${HDF5_FLEX} --version |
||||
fi |
||||
${HDF5_FLEX} --nounistd -PH5LTyy -o ${path_to_hl_src}/H5LTanalyze.c ${path_to_hl_src}/H5LTanalyze.l |
||||
|
||||
# fix H5LTparse.c and H5LTlparse.h to declare H5LTyyparse return type as an |
||||
# hid_t instead of int. Currently the generated function H5LTyyparse is |
||||
# generated with a return value of type int, which is a mapping to the |
||||
# flex yyparse function. The return value in the HL library should be |
||||
# an hid_t. |
||||
# I propose to not use flex to generate this function, but for now I am |
||||
# adding a perl command to find and replace this function declaration in |
||||
# H5LTparse.c. |
||||
perl -0777 -pi -e 's/int yyparse/hid_t yyparse/igs' ${path_to_hl_src}/H5LTparse.c |
||||
perl -0777 -pi -e 's/int\nyyparse/hid_t\nyyparse/igs' ${path_to_hl_src}/H5LTparse.c |
||||
perl -0777 -pi -e 's/int H5LTyyparse/hid_t H5LTyyparse/igs' ${path_to_hl_src}/H5LTparse.c |
||||
perl -0777 -pi -e 's/int yyparse/hid_t yyparse/igs' ${path_to_hl_src}/H5LTparse.h |
||||
perl -0777 -pi -e 's/int\nyyparse/hid_t\nyyparse/igs' ${path_to_hl_src}/H5LTparse.h |
||||
perl -0777 -pi -e 's/int H5LTyyparse/hid_t H5LTyyparse/igs' ${path_to_hl_src}/H5LTparse.h |
||||
|
||||
# Add code that disables warnings in the flex/bison-generated code. |
||||
# |
||||
# Note that the GCC pragmas did not exist until gcc 4.2. Earlier versions |
||||
# will simply ignore them, but we want to avoid those warnings. |
||||
# |
||||
# Note also that although clang defines __GNUC__, it doesn't support every |
||||
# warning that GCC does. |
||||
for f in ${path_to_hl_src}/H5LTparse.c ${path_to_hl_src}/H5LTanalyze.c |
||||
do |
||||
echo '#if defined (__GNUC__) ' >> tmp.out |
||||
echo '#if ((__GNUC__ * 100) + __GNUC_MINOR__) >= 402 ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wconversion" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wimplicit-function-declaration" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wmissing-prototypes" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wnested-externs" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wold-style-definition" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wredundant-decls" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wsign-compare" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wsign-conversion" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wstrict-overflow" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wstrict-prototypes" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wimplicit-fallthrough" ' >> tmp.out |
||||
echo '#if !defined (__clang__) ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wlarger-than=" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wsuggest-attribute=const" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wsuggest-attribute=pure" ' >> tmp.out |
||||
echo '#endif ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wswitch-default" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wunused-function" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wunused-macros" ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wunused-parameter" ' >> tmp.out |
||||
echo '#endif ' >> tmp.out |
||||
echo '#if ((__GNUC__ * 100) + __GNUC_MINOR__) >= 600 ' >> tmp.out |
||||
echo '#pragma GCC diagnostic ignored "-Wnull-dereference" ' >> tmp.out |
||||
echo '#endif ' >> tmp.out |
||||
echo '#elif defined __SUNPRO_CC ' >> tmp.out |
||||
echo '#pragma disable_warn ' >> tmp.out |
||||
echo '#elif defined _MSC_VER ' >> tmp.out |
||||
echo '#pragma warning(push, 1) ' >> tmp.out |
||||
echo '#endif ' >> tmp.out |
||||
|
||||
cat $f >> tmp.out |
||||
mv tmp.out $f |
||||
done |
||||
|
||||
echo |
||||
exit 0 |
||||
|
||||
@ -0,0 +1,391 @@ |
||||
#! /bin/sh |
||||
## |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
## |
||||
|
||||
# This tool is adapted from the mpicc command of the MPICH Software. |
||||
|
||||
############################################################################ |
||||
## ## |
||||
## Things You May Have to Modify: ## |
||||
## ## |
||||
## If the following paths don't point to the place were HDF5 is installed ## |
||||
## on your system (i.e., you received a binary distribution or moved the ## |
||||
## files from the originally installed directory to another directory) ## |
||||
## then modify them accordingly to represent the new paths. ## |
||||
## ## |
||||
############################################################################ |
||||
prefix="/mnt/Storage/Documents/Code/LibraryTest/lib/hdf5-1.14.1" |
||||
exec_prefix="${prefix}" |
||||
libdir="${exec_prefix}/lib" |
||||
includedir="${prefix}/include" |
||||
HL="hl" |
||||
|
||||
############################################################################ |
||||
## ## |
||||
## Things You Can Modify to Override HDF5 Library Build Components: ## |
||||
## ## |
||||
## (Advanced usage - know what you're doing - you're on your own here.) ## |
||||
## The four variables below can be used to insert paths and flags in ## |
||||
## CPPFLAGS, CFLAGS, LDFLAGS, or LIBS in the h5cc compile line: ## |
||||
## $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS ## |
||||
## $LIBS $clibpath $link_objs $link_args $shared_link ## |
||||
## ## |
||||
## These settings can be overridden by setting HDF5_CFLAGS, ## |
||||
## HDF5_CPPFLAGS, HDF5_LDFLAGS, or HDF5_LIBS in the environment. ## |
||||
## ## |
||||
############################################################################ |
||||
CFLAGSBASE="" |
||||
CPPFLAGSBASE="" |
||||
LDFLAGSBASE="" |
||||
LIBSBASE="" |
||||
|
||||
############################################################################ |
||||
## ## |
||||
## You shouldn't have to modify anything below this line. ## |
||||
## ## |
||||
############################################################################ |
||||
|
||||
# Constants definitions |
||||
EXIT_SUCCESS=0 |
||||
EXIT_FAILURE=1 |
||||
|
||||
host_os="linux-gnu" |
||||
|
||||
prog_name="`basename $0`" |
||||
|
||||
allargs="" |
||||
compile_args="" |
||||
libraries="" |
||||
link_args="" |
||||
link_objs="" |
||||
clibpath="" |
||||
|
||||
do_link="yes" |
||||
do_compile="no" |
||||
dash_o="no" |
||||
dash_c="no" |
||||
get_output_file="no" |
||||
|
||||
SHOW="eval" |
||||
CCBASE="gcc" |
||||
CLINKERBASE="gcc" |
||||
|
||||
# CFLAGS, CPPFLAGS and LDFLAGS are reserved for use by the script user. |
||||
# FLAGS brought from the hdf5 build are put in H5BLD_*FLAGS. |
||||
|
||||
# User's CPPFLAGS and CFLAGS come after their H5BLD counterparts. User's |
||||
# LDFLAGS come just before clibpath, user's LIBS come after $link_objs and |
||||
# before the hdf5 libraries in $link_args, followed by any external library |
||||
# paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in |
||||
# from the hdf5 build. The order of the flags is intended to give precedence |
||||
# to the user's flags. |
||||
H5BLD_CFLAGS=" " |
||||
H5BLD_CPPFLAGS=" -I/mnt/Storage/Documents/Code/LibraryTest/lib/zlib-1.2.13/include " |
||||
H5BLD_LDFLAGS=" -L/mnt/Storage/Documents/Code/LibraryTest/lib/zlib-1.2.13/lib -L/mnt/Storage/Documents/Code/LibraryTest/lib/zlib-1.2.13/lib -Wl,-rpath,/mnt/Storage/Documents/Code/LibraryTest/lib/zlib-1.2.13/lib" |
||||
H5BLD_LIBS="-lz -ldl -lm " |
||||
|
||||
CC="${HDF5_CC:-$CCBASE}" |
||||
CLINKER="${HDF5_CLINKER:-$CLINKERBASE}" |
||||
CFLAGS="${HDF5_CFLAGS:-$CFLAGSBASE}" |
||||
CPPFLAGS="${HDF5_CPPFLAGS:-$CPPFLAGSBASE}" |
||||
LDFLAGS="${HDF5_LDFLAGS:-$LDFLAGSBASE}" |
||||
LIBS="${HDF5_LIBS:-$LIBSBASE}" |
||||
|
||||
# If a static library is available, the default will be to use it. If the only |
||||
# available library is shared, it will be used by default. The user can |
||||
# override either default, although choosing an unavailable library will result |
||||
# in link errors. |
||||
STATIC_AVAILABLE="yes" |
||||
if test "${STATIC_AVAILABLE}" = "yes"; then |
||||
USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}" |
||||
else |
||||
USE_SHARED_LIB="${HDF5_USE_SHLIB:-yes}" |
||||
fi |
||||
|
||||
|
||||
usage() { |
||||
# A wonderfully informative "usage" message. |
||||
echo "usage: $prog_name [OPTIONS] <compile line>" |
||||
echo " OPTIONS:" |
||||
echo " -help This help message." |
||||
echo " -echo Show all the shell commands executed" |
||||
echo " -prefix=DIR Prefix directory to find HDF5 lib/ and include/" |
||||
echo " subdirectories [default: $prefix]" |
||||
echo " -show Show the commands without executing them" |
||||
echo " -showconfig Show the HDF5 library configuration summary" |
||||
echo " -shlib Compile with shared HDF5 libraries [default for hdf5 built" |
||||
echo " without static libraries]" |
||||
echo " -noshlib Compile with static HDF5 libraries [default for hdf5 built" |
||||
echo " with static libraries]" |
||||
echo " " |
||||
echo " <compile line> - the normal compile line options for your compiler." |
||||
echo " $prog_name uses the same compiler you used to compile" |
||||
echo " HDF5. Check with your compiler's man pages for more" |
||||
echo " information on which options are needed." |
||||
echo " " |
||||
echo " You can override the compiler, linker, and whether or not to use static" |
||||
echo " or shared libraries to compile your program by setting the following" |
||||
echo " environment variables accordingly:" |
||||
echo " " |
||||
echo " HDF5_CC - use a different C compiler" |
||||
echo " HDF5_CLINKER - use a different linker" |
||||
echo " HDF5_USE_SHLIB=[yes|no] - use shared or static version of the HDF5 library" |
||||
echo " [default: no except when built with only" |
||||
echo " shared libraries]" |
||||
echo " " |
||||
echo " You can also add or change paths and flags to the compile line using" |
||||
echo " the following environment variables or by assigning them to their counterparts" |
||||
echo " in the 'Things You Can Modify to Override...'" section of $prog_name |
||||
echo " " |
||||
echo " Variable Current value to be replaced" |
||||
echo " HDF5_CPPFLAGS \"$CPPFLAGSBASE\"" |
||||
echo " HDF5_CFLAGS \"$CFLAGSBASE\"" |
||||
echo " HDF5_LDFLAGS \"$LDFLAGSBASE\"" |
||||
echo " HDF5_LIBS \"$LIBSBASE\"" |
||||
echo " " |
||||
echo " Note that adding library paths to HDF5_LDFLAGS where another hdf5 version" |
||||
echo " is located may link your program with that other hdf5 library version." |
||||
echo " " |
||||
exit $EXIT_FAILURE |
||||
} |
||||
|
||||
# Show the configuration summary of the library recorded in the |
||||
# libhdf5.settings file reside in the lib directory. |
||||
showconfigure() |
||||
{ |
||||
cat ${libdir}/libhdf5.settings |
||||
status=$? |
||||
} |
||||
|
||||
# Main |
||||
status=$EXIT_SUCCESS |
||||
|
||||
if test "$#" = "0"; then |
||||
# No parameters specified, issue usage statement and exit. |
||||
usage |
||||
fi |
||||
|
||||
case "$CC" in |
||||
gcc) |
||||
kind="gcc" |
||||
;; |
||||
mpicc|mpcc|mpicc_r) |
||||
# Is this gcc masquarading as an MPI compiler? |
||||
if test "`${CC} -v 2>&1 | sed -n 2p | cut -c1-3`" = "gcc"; then |
||||
kind="gcc" |
||||
else |
||||
# Nope |
||||
kind="$host_os" |
||||
fi |
||||
;; |
||||
*) |
||||
kind="$host_os" |
||||
;; |
||||
esac |
||||
|
||||
for arg in $@ ; do |
||||
if test "x$get_output_file" = "xyes"; then |
||||
link_args="$link_args $arg" |
||||
output_file="$arg" |
||||
get_output_file="no" |
||||
continue |
||||
fi |
||||
|
||||
case "$arg" in |
||||
-c) |
||||
allargs="$allargs $arg" |
||||
compile_args="$compile_args $arg" |
||||
|
||||
if test "x$do_link" = "xyes" -a -n "$output_file"; then |
||||
compile_args="$compile_args -o $output_file" |
||||
fi |
||||
|
||||
do_link="no" |
||||
dash_c="yes" |
||||
;; |
||||
-o) |
||||
allargs="$allargs $arg" |
||||
dash_o="yes" |
||||
|
||||
if test "x$dash_c" = "xyes"; then |
||||
compile_args="$compile_args $arg" |
||||
else |
||||
link_args="$link_args $arg" |
||||
do_link="yes" |
||||
get_output_file="yes" |
||||
fi |
||||
;; |
||||
-E|-M|-MT) |
||||
allargs="$allargs $arg" |
||||
compile_args="$compile_args $arg" |
||||
dash_c="yes" |
||||
do_link="no" |
||||
;; |
||||
-l*) |
||||
libraries=" $libraries $arg " |
||||
allargs="$allargs $arg" |
||||
;; |
||||
-prefix=*) |
||||
prefix="`expr "$arg" : '-prefix=\(.*\)'`" |
||||
;; |
||||
-echo) |
||||
set -x |
||||
;; |
||||
-show) |
||||
SHOW="echo" |
||||
;; |
||||
-showconfig) |
||||
showconfigure |
||||
exit $status |
||||
;; |
||||
-shlib) |
||||
USE_SHARED_LIB="yes" |
||||
;; |
||||
-noshlib) |
||||
USE_SHARED_LIB="no" |
||||
;; |
||||
-help) |
||||
usage |
||||
;; |
||||
*\"*) |
||||
qarg="'"$arg"'" |
||||
allargs="$allargs $qarg" |
||||
;; |
||||
*\'*) |
||||
qarg='\"'"$arg"'\"' |
||||
allargs="$allargs $qarg" |
||||
;; |
||||
*) |
||||
allargs="$allargs $qarg" |
||||
|
||||
if test -s "$arg"; then |
||||
ext=`expr "$arg" : '.*\(\..*\)'` |
||||
|
||||
if test "x$ext" = "x.c"; then |
||||
do_compile="yes" |
||||
compile_args="$compile_args $arg" |
||||
fname=`basename $arg .c` |
||||
link_objs="$link_objs $fname.o" |
||||
elif test "x$ext" = "x.o"; then |
||||
if test "x$dash_c" = "xyes"; then |
||||
compile_args="$compile_args $arg" |
||||
else |
||||
do_link="yes" |
||||
link_objs="$link_objs $arg" |
||||
fi |
||||
elif test "x$ext" = "x.a"; then |
||||
# This is an archive that we're linking in |
||||
libraries=" $libraries $arg " |
||||
else |
||||
compile_args="$compile_args $arg" |
||||
link_args="$link_args $arg" |
||||
fi |
||||
else |
||||
compile_args="$compile_args $arg" |
||||
link_args="$link_args $arg" |
||||
fi |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
if test "$dash_c" = "yes" -a "$do_compile" = no -a "$do_link" = no ; then |
||||
# -c was specified. Force do_compile on. |
||||
do_compile=yes |
||||
fi |
||||
|
||||
if test "x$do_compile" = "xyes"; then |
||||
if test "x$dash_c" != "xyes"; then |
||||
compile_args="-c $compile_args" |
||||
fi |
||||
|
||||
$SHOW $CC -I$includedir $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $compile_args |
||||
status=$? |
||||
|
||||
if test "$status" != "0"; then |
||||
exit $status |
||||
fi |
||||
fi |
||||
|
||||
if test "x$do_link" = "xyes"; then |
||||
shared_link="" |
||||
# conditionally link with the hl library |
||||
if test "X$HL" = "Xhl"; then |
||||
libraries=" $libraries -lhdf5_hl -lhdf5 " |
||||
else |
||||
libraries=" $libraries -lhdf5 " |
||||
fi |
||||
link_args="$link_args -L${libdir}" |
||||
|
||||
case "$kind" in |
||||
gcc|linux*) |
||||
# MacOS X doesn't support the "-Wl,-rpath -Wl," style of linker flags. |
||||
# It appears to want none of them specified. |
||||
case "$host_os" in |
||||
darwin*) flag="" ;; |
||||
*) flag="-Wl,-rpath -Wl," ;; |
||||
esac |
||||
;; |
||||
hpux*) flag="-Wl,+b -Wl," ;; |
||||
freebsd*|solaris*) flag="-R" ;; |
||||
rs6000*|aix*) flag="-L" ;; |
||||
sgi) flag="-rpath " ;; |
||||
*) flag="" ;; |
||||
esac |
||||
|
||||
if test -n "$flag"; then |
||||
shared_link="${flag}${libdir}" |
||||
fi |
||||
|
||||
if test "x$USE_SHARED_LIB" != "xyes"; then |
||||
# The "-lhdf5" & "-lhdf5_hl" flags are in here already...This is a static |
||||
# compile though, so change it to the static version (.a) of the library. |
||||
new_libraries="" |
||||
for lib in $libraries; do |
||||
case "$lib" in |
||||
-lhdf5) |
||||
new_libraries="$new_libraries ${libdir}/libhdf5.a" |
||||
;; |
||||
-lhdf5_hl) |
||||
new_libraries="$new_libraries ${libdir}/libhdf5_hl.a" |
||||
;; |
||||
*) |
||||
new_libraries="$new_libraries $lib" |
||||
;; |
||||
esac |
||||
done |
||||
libraries="$new_libraries" |
||||
fi |
||||
|
||||
for lib in $libraries; do |
||||
if echo $link_args | grep " $lib " > /dev/null || |
||||
echo $link_args | grep " $lib$" > /dev/null; then |
||||
: |
||||
else |
||||
link_args="$link_args $lib " |
||||
fi |
||||
done |
||||
|
||||
# The LIBS are just a bunch of -l* libraries necessary for the HDF5 |
||||
# module. It's okay if they're included twice in the compile line. |
||||
link_args="$link_args $H5BLD_LDFLAGS $H5BLD_LIBS" |
||||
|
||||
# User's CPPFLAGS and CFLAGS come after their H5BLD counterparts. User's |
||||
# LDFLAGS come just before clibpath, user's LIBS come after $link_objs and |
||||
# before the hdf5 libraries in $link_args, followed by any external library |
||||
# paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in |
||||
# from the hdf5 build. The order of the flags is intended to give precedence |
||||
# to the user's flags. |
||||
$SHOW $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args $shared_link |
||||
status=$? |
||||
fi |
||||
|
||||
exit $status |
||||
@ -0,0 +1,391 @@ |
||||
#! /bin/sh |
||||
## |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
## |
||||
|
||||
# This tool is adapted from the mpicc command of the MPICH Software. |
||||
|
||||
############################################################################ |
||||
## ## |
||||
## Things You May Have to Modify: ## |
||||
## ## |
||||
## If the following paths don't point to the place were HDF5 is installed ## |
||||
## on your system (i.e., you received a binary distribution or moved the ## |
||||
## files from the originally installed directory to another directory) ## |
||||
## then modify them accordingly to represent the new paths. ## |
||||
## ## |
||||
############################################################################ |
||||
prefix="@prefix@" |
||||
exec_prefix="@exec_prefix@" |
||||
libdir="@libdir@" |
||||
includedir="@includedir@" |
||||
HL="@HL@" |
||||
|
||||
############################################################################ |
||||
## ## |
||||
## Things You Can Modify to Override HDF5 Library Build Components: ## |
||||
## ## |
||||
## (Advanced usage - know what you're doing - you're on your own here.) ## |
||||
## The four variables below can be used to insert paths and flags in ## |
||||
## CPPFLAGS, CFLAGS, LDFLAGS, or LIBS in the h5cc compile line: ## |
||||
## $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS ## |
||||
## $LIBS $clibpath $link_objs $link_args $shared_link ## |
||||
## ## |
||||
## These settings can be overridden by setting HDF5_CFLAGS, ## |
||||
## HDF5_CPPFLAGS, HDF5_LDFLAGS, or HDF5_LIBS in the environment. ## |
||||
## ## |
||||
############################################################################ |
||||
CFLAGSBASE="" |
||||
CPPFLAGSBASE="" |
||||
LDFLAGSBASE="" |
||||
LIBSBASE="" |
||||
|
||||
############################################################################ |
||||
## ## |
||||
## You shouldn't have to modify anything below this line. ## |
||||
## ## |
||||
############################################################################ |
||||
|
||||
# Constants definitions |
||||
EXIT_SUCCESS=0 |
||||
EXIT_FAILURE=1 |
||||
|
||||
host_os="@host_os@" |
||||
|
||||
prog_name="`basename $0`" |
||||
|
||||
allargs="" |
||||
compile_args="" |
||||
libraries="" |
||||
link_args="" |
||||
link_objs="" |
||||
clibpath="" |
||||
|
||||
do_link="yes" |
||||
do_compile="no" |
||||
dash_o="no" |
||||
dash_c="no" |
||||
get_output_file="no" |
||||
|
||||
SHOW="eval" |
||||
CCBASE="@CC@" |
||||
CLINKERBASE="@CC@" |
||||
|
||||
# CFLAGS, CPPFLAGS and LDFLAGS are reserved for use by the script user. |
||||
# FLAGS brought from the hdf5 build are put in H5BLD_*FLAGS. |
||||
|
||||
# User's CPPFLAGS and CFLAGS come after their H5BLD counterparts. User's |
||||
# LDFLAGS come just before clibpath, user's LIBS come after $link_objs and |
||||
# before the hdf5 libraries in $link_args, followed by any external library |
||||
# paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in |
||||
# from the hdf5 build. The order of the flags is intended to give precedence |
||||
# to the user's flags. |
||||
H5BLD_CFLAGS="@AM_CFLAGS@ @CFLAGS@" |
||||
H5BLD_CPPFLAGS="@AM_CPPFLAGS@ @CPPFLAGS@" |
||||
H5BLD_LDFLAGS="@AM_LDFLAGS@ @LDFLAGS@" |
||||
H5BLD_LIBS="@LIBS@" |
||||
|
||||
CC="${HDF5_CC:-$CCBASE}" |
||||
CLINKER="${HDF5_CLINKER:-$CLINKERBASE}" |
||||
CFLAGS="${HDF5_CFLAGS:-$CFLAGSBASE}" |
||||
CPPFLAGS="${HDF5_CPPFLAGS:-$CPPFLAGSBASE}" |
||||
LDFLAGS="${HDF5_LDFLAGS:-$LDFLAGSBASE}" |
||||
LIBS="${HDF5_LIBS:-$LIBSBASE}" |
||||
|
||||
# If a static library is available, the default will be to use it. If the only |
||||
# available library is shared, it will be used by default. The user can |
||||
# override either default, although choosing an unavailable library will result |
||||
# in link errors. |
||||
STATIC_AVAILABLE="@enable_static@" |
||||
if test "${STATIC_AVAILABLE}" = "yes"; then |
||||
USE_SHARED_LIB="${HDF5_USE_SHLIB:-no}" |
||||
else |
||||
USE_SHARED_LIB="${HDF5_USE_SHLIB:-yes}" |
||||
fi |
||||
|
||||
|
||||
usage() { |
||||
# A wonderfully informative "usage" message. |
||||
echo "usage: $prog_name [OPTIONS] <compile line>" |
||||
echo " OPTIONS:" |
||||
echo " -help This help message." |
||||
echo " -echo Show all the shell commands executed" |
||||
echo " -prefix=DIR Prefix directory to find HDF5 lib/ and include/" |
||||
echo " subdirectories [default: $prefix]" |
||||
echo " -show Show the commands without executing them" |
||||
echo " -showconfig Show the HDF5 library configuration summary" |
||||
echo " -shlib Compile with shared HDF5 libraries [default for hdf5 built" |
||||
echo " without static libraries]" |
||||
echo " -noshlib Compile with static HDF5 libraries [default for hdf5 built" |
||||
echo " with static libraries]" |
||||
echo " " |
||||
echo " <compile line> - the normal compile line options for your compiler." |
||||
echo " $prog_name uses the same compiler you used to compile" |
||||
echo " HDF5. Check with your compiler's man pages for more" |
||||
echo " information on which options are needed." |
||||
echo " " |
||||
echo " You can override the compiler, linker, and whether or not to use static" |
||||
echo " or shared libraries to compile your program by setting the following" |
||||
echo " environment variables accordingly:" |
||||
echo " " |
||||
echo " HDF5_CC - use a different C compiler" |
||||
echo " HDF5_CLINKER - use a different linker" |
||||
echo " HDF5_USE_SHLIB=[yes|no] - use shared or static version of the HDF5 library" |
||||
echo " [default: no except when built with only" |
||||
echo " shared libraries]" |
||||
echo " " |
||||
echo " You can also add or change paths and flags to the compile line using" |
||||
echo " the following environment variables or by assigning them to their counterparts" |
||||
echo " in the 'Things You Can Modify to Override...'" section of $prog_name |
||||
echo " " |
||||
echo " Variable Current value to be replaced" |
||||
echo " HDF5_CPPFLAGS \"$CPPFLAGSBASE\"" |
||||
echo " HDF5_CFLAGS \"$CFLAGSBASE\"" |
||||
echo " HDF5_LDFLAGS \"$LDFLAGSBASE\"" |
||||
echo " HDF5_LIBS \"$LIBSBASE\"" |
||||
echo " " |
||||
echo " Note that adding library paths to HDF5_LDFLAGS where another hdf5 version" |
||||
echo " is located may link your program with that other hdf5 library version." |
||||
echo " " |
||||
exit $EXIT_FAILURE |
||||
} |
||||
|
||||
# Show the configuration summary of the library recorded in the |
||||
# libhdf5.settings file reside in the lib directory. |
||||
showconfigure() |
||||
{ |
||||
cat ${libdir}/libhdf5.settings |
||||
status=$? |
||||
} |
||||
|
||||
# Main |
||||
status=$EXIT_SUCCESS |
||||
|
||||
if test "$#" = "0"; then |
||||
# No parameters specified, issue usage statement and exit. |
||||
usage |
||||
fi |
||||
|
||||
case "$CC" in |
||||
gcc) |
||||
kind="gcc" |
||||
;; |
||||
mpicc|mpcc|mpicc_r) |
||||
# Is this gcc masquarading as an MPI compiler? |
||||
if test "`${CC} -v 2>&1 | sed -n 2p | cut -c1-3`" = "gcc"; then |
||||
kind="gcc" |
||||
else |
||||
# Nope |
||||
kind="$host_os" |
||||
fi |
||||
;; |
||||
*) |
||||
kind="$host_os" |
||||
;; |
||||
esac |
||||
|
||||
for arg in $@ ; do |
||||
if test "x$get_output_file" = "xyes"; then |
||||
link_args="$link_args $arg" |
||||
output_file="$arg" |
||||
get_output_file="no" |
||||
continue |
||||
fi |
||||
|
||||
case "$arg" in |
||||
-c) |
||||
allargs="$allargs $arg" |
||||
compile_args="$compile_args $arg" |
||||
|
||||
if test "x$do_link" = "xyes" -a -n "$output_file"; then |
||||
compile_args="$compile_args -o $output_file" |
||||
fi |
||||
|
||||
do_link="no" |
||||
dash_c="yes" |
||||
;; |
||||
-o) |
||||
allargs="$allargs $arg" |
||||
dash_o="yes" |
||||
|
||||
if test "x$dash_c" = "xyes"; then |
||||
compile_args="$compile_args $arg" |
||||
else |
||||
link_args="$link_args $arg" |
||||
do_link="yes" |
||||
get_output_file="yes" |
||||
fi |
||||
;; |
||||
-E|-M|-MT) |
||||
allargs="$allargs $arg" |
||||
compile_args="$compile_args $arg" |
||||
dash_c="yes" |
||||
do_link="no" |
||||
;; |
||||
-l*) |
||||
libraries=" $libraries $arg " |
||||
allargs="$allargs $arg" |
||||
;; |
||||
-prefix=*) |
||||
prefix="`expr "$arg" : '-prefix=\(.*\)'`" |
||||
;; |
||||
-echo) |
||||
set -x |
||||
;; |
||||
-show) |
||||
SHOW="echo" |
||||
;; |
||||
-showconfig) |
||||
showconfigure |
||||
exit $status |
||||
;; |
||||
-shlib) |
||||
USE_SHARED_LIB="yes" |
||||
;; |
||||
-noshlib) |
||||
USE_SHARED_LIB="no" |
||||
;; |
||||
-help) |
||||
usage |
||||
;; |
||||
*\"*) |
||||
qarg="'"$arg"'" |
||||
allargs="$allargs $qarg" |
||||
;; |
||||
*\'*) |
||||
qarg='\"'"$arg"'\"' |
||||
allargs="$allargs $qarg" |
||||
;; |
||||
*) |
||||
allargs="$allargs $qarg" |
||||
|
||||
if test -s "$arg"; then |
||||
ext=`expr "$arg" : '.*\(\..*\)'` |
||||
|
||||
if test "x$ext" = "x.c"; then |
||||
do_compile="yes" |
||||
compile_args="$compile_args $arg" |
||||
fname=`basename $arg .c` |
||||
link_objs="$link_objs $fname.o" |
||||
elif test "x$ext" = "x.o"; then |
||||
if test "x$dash_c" = "xyes"; then |
||||
compile_args="$compile_args $arg" |
||||
else |
||||
do_link="yes" |
||||
link_objs="$link_objs $arg" |
||||
fi |
||||
elif test "x$ext" = "x.a"; then |
||||
# This is an archive that we're linking in |
||||
libraries=" $libraries $arg " |
||||
else |
||||
compile_args="$compile_args $arg" |
||||
link_args="$link_args $arg" |
||||
fi |
||||
else |
||||
compile_args="$compile_args $arg" |
||||
link_args="$link_args $arg" |
||||
fi |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
if test "$dash_c" = "yes" -a "$do_compile" = no -a "$do_link" = no ; then |
||||
# -c was specified. Force do_compile on. |
||||
do_compile=yes |
||||
fi |
||||
|
||||
if test "x$do_compile" = "xyes"; then |
||||
if test "x$dash_c" != "xyes"; then |
||||
compile_args="-c $compile_args" |
||||
fi |
||||
|
||||
$SHOW $CC -I$includedir $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $compile_args |
||||
status=$? |
||||
|
||||
if test "$status" != "0"; then |
||||
exit $status |
||||
fi |
||||
fi |
||||
|
||||
if test "x$do_link" = "xyes"; then |
||||
shared_link="" |
||||
# conditionally link with the hl library |
||||
if test "X$HL" = "Xhl"; then |
||||
libraries=" $libraries -lhdf5_hl -lhdf5 " |
||||
else |
||||
libraries=" $libraries -lhdf5 " |
||||
fi |
||||
link_args="$link_args -L${libdir}" |
||||
|
||||
case "$kind" in |
||||
gcc|linux*) |
||||
# MacOS X doesn't support the "-Wl,-rpath -Wl," style of linker flags. |
||||
# It appears to want none of them specified. |
||||
case "$host_os" in |
||||
darwin*) flag="" ;; |
||||
*) flag="-Wl,-rpath -Wl," ;; |
||||
esac |
||||
;; |
||||
hpux*) flag="-Wl,+b -Wl," ;; |
||||
freebsd*|solaris*) flag="-R" ;; |
||||
rs6000*|aix*) flag="-L" ;; |
||||
sgi) flag="-rpath " ;; |
||||
*) flag="" ;; |
||||
esac |
||||
|
||||
if test -n "$flag"; then |
||||
shared_link="${flag}${libdir}" |
||||
fi |
||||
|
||||
if test "x$USE_SHARED_LIB" != "xyes"; then |
||||
# The "-lhdf5" & "-lhdf5_hl" flags are in here already...This is a static |
||||
# compile though, so change it to the static version (.a) of the library. |
||||
new_libraries="" |
||||
for lib in $libraries; do |
||||
case "$lib" in |
||||
-lhdf5) |
||||
new_libraries="$new_libraries ${libdir}/libhdf5.a" |
||||
;; |
||||
-lhdf5_hl) |
||||
new_libraries="$new_libraries ${libdir}/libhdf5_hl.a" |
||||
;; |
||||
*) |
||||
new_libraries="$new_libraries $lib" |
||||
;; |
||||
esac |
||||
done |
||||
libraries="$new_libraries" |
||||
fi |
||||
|
||||
for lib in $libraries; do |
||||
if echo $link_args | grep " $lib " > /dev/null || |
||||
echo $link_args | grep " $lib$" > /dev/null; then |
||||
: |
||||
else |
||||
link_args="$link_args $lib " |
||||
fi |
||||
done |
||||
|
||||
# The LIBS are just a bunch of -l* libraries necessary for the HDF5 |
||||
# module. It's okay if they're included twice in the compile line. |
||||
link_args="$link_args $H5BLD_LDFLAGS $H5BLD_LIBS" |
||||
|
||||
# User's CPPFLAGS and CFLAGS come after their H5BLD counterparts. User's |
||||
# LDFLAGS come just before clibpath, user's LIBS come after $link_objs and |
||||
# before the hdf5 libraries in $link_args, followed by any external library |
||||
# paths and libraries from AM_LDFLAGS, LDFLAGS, AM_LIBS or LIBS carried in |
||||
# from the hdf5 build. The order of the flags is intended to give precedence |
||||
# to the user's flags. |
||||
$SHOW $CLINKER $H5BLD_CPPFLAGS $CPPFLAGS $H5BLD_CFLAGS $CFLAGS $LDFLAGS $clibpath $link_objs $LIBS $link_args $shared_link |
||||
status=$? |
||||
fi |
||||
|
||||
exit $status |
||||
@ -0,0 +1,215 @@ |
||||
#! /bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
## Update HDF5 compiler tools after the HDF5 software has been installed ## |
||||
## in a new location. ## |
||||
## For help page, use "h5redeploy -help" ## |
||||
## ## |
||||
|
||||
# Constants definitions |
||||
EXIT_SUCCESS=0 |
||||
EXIT_FAILURE=1 |
||||
|
||||
# Function definitions |
||||
|
||||
# show help page |
||||
usage() { |
||||
# A wonderfully informative "usage" message. |
||||
echo "usage: $prog_name [OPTIONS]" |
||||
echo " OPTIONS:" |
||||
echo " -help|help This help message" |
||||
echo " -echo Show all the shell commands executed" |
||||
echo " -force No prompt, just do it" |
||||
echo " -prefix=DIR New directory to find HDF5 lib/ and include/" |
||||
echo " subdirectories [default: current directory]" |
||||
echo " -exec-prefix=DIR New directory to find HDF5 lib/" |
||||
echo " subdirectory [default: <prefix>]" |
||||
echo " -libdir=DIR New directory for the HDF5 lib directory" |
||||
echo " [default: <exec-prefix>/lib]" |
||||
echo " -includedir=DIR New directory for the HDF5 header files" |
||||
echo " [default: <prefix>/include]" |
||||
echo " -tool=TOOL Tool to update. TOOL must be in the current" |
||||
echo " directory and writable. [default: $h5tools]" |
||||
echo " -show Show the commands without executing them" |
||||
echo " " |
||||
exit $EXIT_FAILURE |
||||
} |
||||
|
||||
# display variable values |
||||
dump_vars(){ |
||||
echo "====Showing all variable values=====" |
||||
echo prefix=$prefix |
||||
echo h5tools=$h5tools |
||||
echo "====End Showing=====" |
||||
} |
||||
|
||||
# show actions to be taken |
||||
show_action() |
||||
{ |
||||
echo "Update the following tools because they are now installed at a new directory" |
||||
for t in $foundtools; do |
||||
echo "${t}:" |
||||
echo " current setting=`sed -e '/^prefix=/s/prefix=//p' -e d $t`" |
||||
echo " new setting="\""$prefix"\" |
||||
done |
||||
} |
||||
|
||||
|
||||
# Report Error message |
||||
ERROR() |
||||
{ |
||||
echo "***ERROR***" |
||||
echo "$1" |
||||
} |
||||
|
||||
# Main |
||||
# |
||||
############################################################################ |
||||
## Installation directories: ## |
||||
## prefix architecture-independent files. ## |
||||
## exec_prefix architecture-dependent files, default is <prefix>. ## |
||||
## libdir libraries, default is <exec_prefix>/lib. ## |
||||
## includedir header files, default is <prefix/include>. ## |
||||
## Not used here: ## |
||||
## bindir executables, <exec_prefix/bin>. ## |
||||
############################################################################ |
||||
# Initialization |
||||
h5tools="h5cc h5pcc h5fc h5pfc h5c++" # possible hdf5 tools |
||||
foundtools= # tools found and will be modified |
||||
fmode= # force mode, default is off |
||||
prefix= |
||||
exec_prefix= |
||||
libdir= |
||||
includedir= |
||||
|
||||
# Parse options |
||||
for arg in $@ ; do |
||||
case "$arg" in |
||||
-prefix=*) |
||||
prefix="`echo $arg | cut -f2 -d=`" |
||||
;; |
||||
-exec-prefix=*) |
||||
exec_prefix="`echo $arg | cut -f2 -d=`" |
||||
;; |
||||
-libdir=*) |
||||
libdir="`echo $arg | cut -f2 -d=`" |
||||
;; |
||||
-includedir=*) |
||||
includedir="`echo $arg | cut -f2 -d=`" |
||||
;; |
||||
-echo) |
||||
set -x |
||||
;; |
||||
-show) |
||||
SHOW="echo" |
||||
;; |
||||
-tool=*) |
||||
h5tools="`echo $arg | cut -f2 -d=`" |
||||
;; |
||||
-help|help) |
||||
usage |
||||
;; |
||||
-force) |
||||
fmode=yes |
||||
;; |
||||
*) |
||||
ERROR "Unknown Option($arg)" |
||||
usage |
||||
exit $EXIT_FAILURE |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# Set to default value, one above where i am, if not given by user |
||||
if [ -z "$prefix" ]; then |
||||
prefix=`(cd ..;pwd)` |
||||
fi |
||||
if [ -z "$exec_prefix" ]; then |
||||
exec_prefix='${prefix}' # use single quotes to prevent expansion of $ |
||||
fi |
||||
if [ -z "$libdir" ]; then |
||||
libdir='${exec_prefix}'/lib # use single quotes to prevent expansion of $ |
||||
fi |
||||
if [ -z "$includedir" ]; then |
||||
includedir='${prefix}'/include # use single quotes to prevent expansion of $ |
||||
fi |
||||
|
||||
for x in $h5tools; do |
||||
if [ -f $x ]; then |
||||
foundtools="$foundtools $x" |
||||
if [ ! -w $x ]; then |
||||
ERROR "h5tool($x) is not writable" |
||||
exit $EXIT_FAILURE |
||||
fi |
||||
fi |
||||
done |
||||
|
||||
if [ -z "$foundtools" ]; then |
||||
ERROR "found no tools to modify" |
||||
exit $EXIT_FAILURE |
||||
fi |
||||
|
||||
# Show actions to be taken and get consent |
||||
show_action |
||||
# Ask confirmation unless fmode is on |
||||
if [ x-$fmode = x- ]; then |
||||
echo "Continue? (yes/no)" |
||||
read ansx |
||||
ans=`echo $ansx | tr "[A-Z]" "[a-z]"` |
||||
if [ x-$ans != x-yes ]; then |
||||
echo ABORT. No tools changed. |
||||
exit $EXIT_FAILURE |
||||
fi |
||||
fi |
||||
|
||||
|
||||
# Create the update commands |
||||
CMDFILE=/tmp/h5redeploy.$$ |
||||
touch $CMDFILE |
||||
chmod 0600 $CMDFILE |
||||
echo "/^prefix=/c" >> $CMDFILE |
||||
echo prefix=\""$prefix"\" >> $CMDFILE |
||||
echo . >> $CMDFILE |
||||
echo "/^exec_prefix=/c" >> $CMDFILE |
||||
echo exec_prefix=\""$exec_prefix"\" >> $CMDFILE |
||||
echo . >> $CMDFILE |
||||
echo "/^libdir=/c" >> $CMDFILE |
||||
echo libdir=\""$libdir"\" >> $CMDFILE |
||||
echo . >> $CMDFILE |
||||
echo "/^includedir=/c" >> $CMDFILE |
||||
echo includedir=\""$includedir"\" >> $CMDFILE |
||||
echo . >> $CMDFILE |
||||
(echo w; echo q) >> $CMDFILE |
||||
|
||||
|
||||
# Update them |
||||
if [ "$SHOW" = "echo" ]; then |
||||
echo "===Update commands are:====" |
||||
cat $CMDFILE |
||||
echo "===End Update commands=====" |
||||
fi |
||||
|
||||
for t in $foundtools; do |
||||
echo Update $t ... |
||||
COMMAND="ed - $t" |
||||
if [ "$SHOW" = "echo" ]; then |
||||
echo $COMMAND |
||||
else |
||||
$COMMAND < $CMDFILE |
||||
fi |
||||
done |
||||
|
||||
|
||||
# Cleanup |
||||
rm -f $CMDFILE |
||||
exit $EXIT_SUCCESS |
||||
@ -0,0 +1,531 @@ |
||||
#! /bin/sh |
||||
perl -x -S $0 "$@" |
||||
exit |
||||
|
||||
#! perl |
||||
require 5.003; |
||||
use strict; |
||||
|
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
# Robb Matzke |
||||
# 17 July 1998 |
||||
|
||||
### Purpose |
||||
# Increments the hdf5 version number by changing the value of |
||||
# constants in the src/H5public.h file. The new version number is |
||||
# printed on the standard output. An alternate source file name can be |
||||
# specified as an argument. In any case, the original file is saved |
||||
# by appending a tilde `~' to the name. |
||||
|
||||
### Usage: |
||||
# h5vers [OPTIONS] [FILE] |
||||
|
||||
# Without options this program only displays the current version and |
||||
# doesn't modify any files or create backups. The default is to print |
||||
# the version number like X.Y.Z-A where X is the major version number, |
||||
# Y is the minor version number, Z is the release number, and A is |
||||
# a short annotation string (the `-' is printed only if A is not empty). |
||||
# If the `-v' switch is given the version will be printed like: |
||||
# |
||||
# version X.Y release Z (A) |
||||
# |
||||
# The space and parentheses around A are only printed if A is not empty. |
||||
# |
||||
# The `-s VERSION' switch will set the version as specified. If the |
||||
# string contains a dotted triple then it will be used as the version |
||||
# number, otherwise up to three numbers will be read from the end of |
||||
# the string and used as the major version, minor version, and release |
||||
# number. If any numbers are missing then zero is assumed. This |
||||
# allows versions to be specified like `-s "version 2.1 release 8"' or |
||||
# `-s hdf5-2.1.8.tar.bz2'. If the new version is less than the old |
||||
# version then a warning message is generated on standard error. The |
||||
# annotation string, A, is set only if it appears immediately after the |
||||
# third number, separated by a dash (e.g., `1.2.3-pre1') or in parentheses |
||||
# (e.g., `version 1.2 release 3 (pre1)'). |
||||
# |
||||
# The `-i [major|minor|release|annot|last]' option increments the major |
||||
# number, minor number, release number, or annotation string. The `last' |
||||
# switch increments the annotation string if present, otherwise the |
||||
# release number. If the release number is incremented then the annotation |
||||
# string is cleared. If the minor number is incremented then the release |
||||
# number is set to zero and the annotation string is cleared; if the major |
||||
# number is incremented then the minor and release numbers are set to zero |
||||
# and the annotation string is cleared. |
||||
# |
||||
# If a file is specified then that file is used instead of |
||||
# ./H5public.h or ./src/H5public.h. |
||||
# |
||||
# If the version number is changed (either `-s' or `-i' was used on |
||||
# the command line) then the version line of the README.md and RELEASE.txt files |
||||
# one directory above the H5public.h file is also modified so it looks |
||||
# something like: This is hdf5-1.2.3-pre1 currently under development. |
||||
# The AC_INIT macro in configure.ac will also change in this case to be |
||||
# something like: AC_INIT([HDF5], [hdf5-1.2.3-pre1], [help@hdfgroup.org]) |
||||
# Version changes are also reflected in the Windows-maintained H5pubconf.h |
||||
# file. |
||||
# |
||||
# Whenever the version changes, this script will increment the revision |
||||
# field in HDF5's libtool shared library version in config/lt_vers.am, |
||||
# which is included in src/Makefile.am. Incrementing the revision field |
||||
# indicates that the source code has changed since the last version |
||||
# (which it probably has). |
||||
############################################################################## |
||||
|
||||
sub getvers { |
||||
local ($_) = @_; |
||||
my (@vers); |
||||
|
||||
($vers[0]) = /^\#\s*define\s+H5_VERS_MAJOR\s+(\d+)/m; |
||||
($vers[1]) = /^\#\s*define\s+H5_VERS_MINOR\s+(\d+)/m; |
||||
($vers[2]) = /^\#\s*define\s+H5_VERS_RELEASE\s+(\d+)/m; |
||||
($vers[3]) = /^\#\s*define\s+H5_VERS_SUBRELEASE\s+\"([^\"]*)\"/m; |
||||
return @vers; |
||||
} |
||||
|
||||
sub setvers { |
||||
my ($contents, @vers) = @_; |
||||
$_[0] =~ s/^(\#\s*define\s+H5_VERS_MAJOR\s+)\d+/$1$vers[0]/m; |
||||
$_[0] =~ s/^(\#\s*define\s+H5_VERS_MINOR\s+)\d+/$1$vers[1]/m; |
||||
$_[0] =~ s/^(\#\s*define\s+H5_VERS_RELEASE\s+)\d+/$1$vers[2]/m; |
||||
$_[0] =~ s/^(\#\s*define\s+H5_VERS_SUBRELEASE\s+\")[^\"]*/$1$vers[3]/m; |
||||
$_[0] =~ s/^(\#\s*define\s+H5_VERS_INFO\s+\")[^\"]*/ |
||||
sprintf("%sHDF5 library version: %d.%d.%d%s%s", $1, @vers[0,1,2], |
||||
$vers[3]?"-":"", $vers[3])/me; |
||||
} |
||||
|
||||
sub usage { |
||||
my ($prog) = $0 =~ /([^\/]+)$/; |
||||
print STDERR <<EOF; |
||||
Usage: $prog [OPTS] [FILE] |
||||
-i major|minor|release|annot |
||||
Increment specified version component and set following components |
||||
to zero. |
||||
-s VERSION |
||||
Set the version as specified. The version number can be embedded in |
||||
some other string such as \"hdf5-1.1.0-pre1.tar.bz2\" or even |
||||
\"this is HDF5 library version 1.1 release 0 (pre1)\" for convenience. |
||||
-v |
||||
Instead of displaying only a dotted triple version number a line such |
||||
as \"version 1.1 release 0 (pre1)\" will be printed. |
||||
FILE |
||||
The name of the file that contains version information. This is |
||||
seldom necessary since files H5public.h, src/H5public.h and |
||||
../src/H5public.h are automatically checked. |
||||
EOF |
||||
exit 1; |
||||
} |
||||
|
||||
|
||||
my ($verbose, $set, $inc, $file, $rc); |
||||
my (@files) = ("H5public.h", "src/H5public.h", "../src/H5public.h"); |
||||
while ($_ = shift) { |
||||
$_ eq "-s" && do { |
||||
die "-s switch needs a version number\n" unless @ARGV; |
||||
$set = shift; |
||||
next; |
||||
}; |
||||
|
||||
$_ eq "-i" && do { |
||||
if (@ARGV && $ARGV[0]=~/^(major|minor|release|annot)$/) { |
||||
$inc = shift; |
||||
} else { |
||||
$inc = "last"; |
||||
} |
||||
next; |
||||
}; |
||||
|
||||
$_ eq "-v" && do { |
||||
$verbose = 1; |
||||
next; |
||||
}; |
||||
|
||||
/^-(h|\?|-?help)$/ && usage; |
||||
/^-/ && die "unrecognized option: $_\n"; |
||||
die "only one file name can be specified\n" if $file; |
||||
$file = $_; |
||||
} |
||||
die "mutually exclusive options given\n" if $set && $inc; |
||||
|
||||
# Determine file to use as H5public.h, README.md, |
||||
# release_docs/RELEASE.txt, configure.ac, windows/src/H5pubconf.h |
||||
# config/lt_vers.am and config/cmake/scripts/HDF5config.cmake. |
||||
# The README.md, release_docs/RELEASE.txt, configure.ac, |
||||
# windows/src/H5pubconf.h, config/lt_vers.am and |
||||
# config/cmake/scripts/HDF5config.cmake |
||||
# files are always in the directory above H5public.h |
||||
unless ($file) { |
||||
for (@files) { |
||||
($file=$_,last) if -f $_; |
||||
} |
||||
} |
||||
die "unable to find source files\n" unless defined $file; |
||||
die "unable to read file: $file\n" unless -r $file; |
||||
# config/lt_vers.am |
||||
my $LT_VERS = $file; |
||||
$LT_VERS =~ s/[^\/]*$/..\/config\/lt_vers.am/; |
||||
die "unable to read file: $LT_VERS\n" unless -r $file; |
||||
# config/cmake/scripts/HDF5config.cmake |
||||
my $HDF5CONFIGCMAKE = $file; |
||||
$HDF5CONFIGCMAKE =~ s/[^\/]*$/..\/config\/cmake\/scripts\/HDF5config.cmake/; |
||||
die "unable to read file: $HDF5CONFIGCMAKE\n" unless -r $file; |
||||
# README.md |
||||
my $README = $file; |
||||
$README =~ s/[^\/]*$/..\/README.md/; |
||||
die "unable to read file: $README\n" unless -r $file; |
||||
# release_docs/RELEASE.txt |
||||
my $RELEASE = $file; |
||||
$RELEASE =~ s/[^\/]*$/..\/release_docs\/RELEASE.txt/; |
||||
die "unable to read file: $RELEASE\n" unless -r $file; |
||||
# configure.ac |
||||
my $CONFIGURE = $file; |
||||
$CONFIGURE =~ s/[^\/]*$/..\/configure.ac/; |
||||
die "unable to read file: $CONFIGURE\n" unless -r $file; |
||||
# cpp_doc_config |
||||
my $CPP_DOC_CONFIG = $file; |
||||
$CPP_DOC_CONFIG =~ s/[^\/]*$/..\/c++\/src\/cpp_doc_config/; |
||||
die "unable to read file: $CPP_DOC_CONFIG\n" unless -r $file; |
||||
my $H5_JAVA = $file; |
||||
$H5_JAVA =~ s/[^\/]*$/..\/java\/src\/hdf\/hdf5lib\/H5.java/; |
||||
die "unable to read file: $H5_JAVA\n" unless -r $file; |
||||
my $TESTH5_JAVA = $file; |
||||
$TESTH5_JAVA =~ s/[^\/]*$/..\/java\/test\/TestH5.java/; |
||||
die "unable to read file: $TESTH5_JAVA\n" unless -r $file; |
||||
my $REPACK_LAYOUT_PLUGIN_VERSION = $file; |
||||
$REPACK_LAYOUT_PLUGIN_VERSION =~ s/[^\/]*$/..\/tools\/test\/h5repack\/testfiles\/h5repack_layout.h5-plugin_version_test.ddl/; |
||||
die "unable to read file: $REPACK_LAYOUT_PLUGIN_VERSION\n" unless -r $file; |
||||
|
||||
# Get the current version number. |
||||
open FILE, $file or die "unable to open $file: $!\n"; |
||||
my ($contents) = join "", <FILE>; |
||||
close FILE; |
||||
my (@curver) = getvers $contents; |
||||
|
||||
# Determine the new version number. |
||||
my @newver; #new version |
||||
if ($set) { |
||||
if ($set =~ /(\d+)\.(\d+)\.(\d+)(-([\da-zA-Z]\w*))?/) { |
||||
@newver = ($1, $2, $3, $5); |
||||
} elsif ($set =~ /(\d+)\D+(\d+)\D+(\d+)(\s*\(([a-zA-Z]\w*)\))?\D*$/) { |
||||
@newver = ($1, $2, $3, $5); |
||||
} elsif ($set =~ /(\d+)\D+(\d+)\D*$/) { |
||||
@newver = ($1, $2, 0, ""); |
||||
} elsif ($set =~ /(\d+)\D*$/) { |
||||
@newver = ($1, 0, 0, ""); |
||||
} else { |
||||
die "illegal version number specified: $set\n"; |
||||
} |
||||
} elsif ($inc) { |
||||
$inc = $curver[3] eq "" ? 'release' : 'annot' if $inc eq 'last'; |
||||
if ($inc eq "major") { |
||||
$newver[0] = $curver[0]+1; |
||||
@newver[1,2,3] = (0,0,""); |
||||
} elsif ($inc eq "minor") { |
||||
$newver[0] = $curver[0]; |
||||
$newver[1] = $curver[1]+1; |
||||
@newver[2,3] = (0,""); |
||||
} elsif ($inc eq "release") { |
||||
@newver[0,1] = @curver[0,1]; |
||||
$newver[2] = $curver[2]+1; |
||||
$newver[3] = ""; |
||||
} elsif ($inc eq "annot") { |
||||
@newver[0,1,2] = @curver[0,1,2]; |
||||
$newver[3] = $curver[3]; |
||||
$newver[3] =~ s/(\d+)\D*$/$1+1/e or |
||||
die "Annotation \"".$newver[3]."\" cannot be incremented.\n"; |
||||
} else { |
||||
die "unknown increment field: $inc\n"; |
||||
} |
||||
} else { |
||||
# Nothing to do but print result |
||||
$README = ""; |
||||
$RELEASE = ""; |
||||
$CONFIGURE = ""; |
||||
$CPP_DOC_CONFIG = ""; |
||||
$LT_VERS = ""; |
||||
$HDF5CONFIGCMAKE = ""; |
||||
@newver = @curver; |
||||
} |
||||
|
||||
# Note if the version increased or decreased |
||||
my $version_increased=""; |
||||
# Print a warning if the version got smaller (don't check annot field) |
||||
if ($newver[0]*1000000 + $newver[1]*1000 + $newver[2] < |
||||
$curver[0]*1000000 + $curver[1]*1000 + $curver[2]) { |
||||
printf STDERR "Warning: version decreased from %d.%d.%d to %d.%d.%d\n", |
||||
@curver[0,1,2], @newver[0,1,2]; |
||||
} |
||||
if ($newver[0]*1000000 + $newver[1]*1000 + $newver[2] > |
||||
$curver[0]*1000000 + $curver[1]*1000 + $curver[2]) { |
||||
$version_increased="true"; |
||||
} |
||||
|
||||
# Update the version number if it changed. |
||||
if ($newver[0]!=$curver[0] || |
||||
$newver[1]!=$curver[1] || |
||||
$newver[2]!=$curver[2] || |
||||
$newver[3]ne$curver[3]) { |
||||
setvers $contents, @newver or die "unable to set version\n"; |
||||
rename $file, "$file~" or die "unable to save backup file\n"; |
||||
open FILE, ">$file" or die "unable to open $file but backup saved!\n"; |
||||
print FILE $contents; |
||||
close FILE; |
||||
} |
||||
|
||||
# Update the libtool shared library version in src/Makefile.am if |
||||
# the version number has increased. |
||||
if ($LT_VERS && $version_increased) { |
||||
open FILE, $LT_VERS or die "$LT_VERS: $!\n"; |
||||
my ($contentsy) = join "", <FILE>; |
||||
close FILE; |
||||
|
||||
local($_) = $contentsy; |
||||
|
||||
# As of the HDF5 v1.8.16 release, h5vers should not increment |
||||
# the LT_VERS numbers, so the next 6 lines are commented out. |
||||
# A future version may copy the numbers to H5public.h, so this |
||||
# section is retained for future reference. |
||||
# my ($lt_revision) = /^LT_VERS_REVISION\s*=\s*(\d+)/m; |
||||
# my $new_lt_revision = $lt_revision+1; |
||||
# ($contentsy) =~ s/^(LT_VERS_REVISION\s*=\s*)\d+/$1$new_lt_revision/m; |
||||
|
||||
# open FILE, ">$LT_VERS" or die "$LT_VERS: $!\n"; |
||||
# print FILE $contentsy; |
||||
# close FILE; |
||||
} |
||||
|
||||
# Update the README.md file |
||||
if ($README) { |
||||
open FILE, $README or die "$README: $!\n"; |
||||
my @contents = <FILE>; |
||||
close FILE; |
||||
$contents[0] = sprintf("HDF5 version %d.%d.%d%s %s", |
||||
@newver[0,1,2], |
||||
$newver[3] eq "" ? "" : "-".$newver[3], |
||||
"currently under development\n"); |
||||
open FILE, ">$README" or die "$README: $!\n"; |
||||
print FILE @contents; |
||||
close FILE; |
||||
} |
||||
|
||||
# Update the release_docs/RELEASE.txt file |
||||
if ($RELEASE) { |
||||
open FILE, $RELEASE or die "$RELEASE: $!\n"; |
||||
my @contents = <FILE>; |
||||
close FILE; |
||||
$contents[0] = sprintf("HDF5 version %d.%d.%d%s %s", |
||||
@newver[0,1,2], |
||||
$newver[3] eq "" ? "" : "-".$newver[3], |
||||
"currently under development\n"); |
||||
open FILE, ">$RELEASE" or die "$RELEASE: $!\n"; |
||||
print FILE @contents; |
||||
close FILE; |
||||
} |
||||
|
||||
# Update the c++/src/cpp_doc_config file |
||||
if ($CPP_DOC_CONFIG) { |
||||
my $data = read_file($CPP_DOC_CONFIG); |
||||
my $sub_rel_ver_str = ( |
||||
$newver[3] eq "" |
||||
? sprintf("%s", "") |
||||
: sprintf("%s", "-".$newver[3].", currently under development") |
||||
); |
||||
my $version_string = sprintf("\"%d.%d.%d%s%s\"", |
||||
@newver[0,1,2], |
||||
$sub_rel_ver_str); |
||||
$data =~ s/PROJECT_NUMBER\s*=.*/PROJECT_NUMBER = $version_string/; |
||||
|
||||
write_file($CPP_DOC_CONFIG, $data); |
||||
} |
||||
|
||||
# Update the config/cmake/scripts/HDF5config.cmake file |
||||
if ($HDF5CONFIGCMAKE) { |
||||
my $data = read_file($HDF5CONFIGCMAKE); |
||||
# my $sub_rel_ver_str = ""; |
||||
my $sub_rel_ver_str = ( |
||||
$newver[3] eq "" |
||||
? sprintf("\"%s\"", "") |
||||
: sprintf("\"%s\"", "-".$newver[3]) |
||||
); |
||||
my $version_string = sprintf("\"%d.%d.%d\"", @newver[0,1,2]); |
||||
|
||||
$data =~ s/set \(CTEST_SOURCE_VERSION .*\)/set \(CTEST_SOURCE_VERSION $version_string\)/; |
||||
$data =~ s/set \(CTEST_SOURCE_VERSEXT .*\)/set \(CTEST_SOURCE_VERSEXT $sub_rel_ver_str\)/; |
||||
|
||||
write_file($HDF5CONFIGCMAKE, $data); |
||||
} |
||||
|
||||
# Update the java/src/hdf/hdf5lib/H5.java file |
||||
if ($H5_JAVA) { |
||||
my $data = read_file($H5_JAVA); |
||||
# my $sub_rel_ver_str = ""; |
||||
my $sub_rel_ver_str = ( |
||||
$newver[3] eq "" |
||||
? sprintf("\"%s\"", "") |
||||
: sprintf("\"%s\"", "-".$newver[3].", currently under development") |
||||
); |
||||
my $version_string1 = sprintf("%d.%d.%d", @newver[0,1,2]); |
||||
my $version_string2 = sprintf("%d, %d, %d", @newver[0,1,2]); |
||||
|
||||
$data =~ s/\@version HDF5 .* <BR>/\@version HDF5 $version_string1 <BR>/; |
||||
$data =~ s/ public final static int LIB_VERSION\[\] = \{\d*,.\d*,.\d*\};/ public final static int LIB_VERSION[] = \{$version_string2\};/; |
||||
|
||||
write_file($H5_JAVA, $data); |
||||
} |
||||
|
||||
# Update the java/test/TestH5.java file |
||||
if ($TESTH5_JAVA) { |
||||
my $data = read_file($TESTH5_JAVA); |
||||
# my $sub_rel_ver_str = ""; |
||||
my $sub_rel_ver_str = ( |
||||
$newver[3] eq "" |
||||
? sprintf("\"%s\"", "") |
||||
: sprintf("\"%s\"", "-".$newver[3].", currently under development") |
||||
); |
||||
my $version_string1 = sprintf("%d, %d, %d", @newver[0,1,2]); |
||||
my $version_string2 = sprintf("int majnum = %d, minnum = %d, relnum = %d", @newver[0,1,2]); |
||||
|
||||
$data =~ s/ int libversion\[\] = \{.*\};/ int libversion\[\] = \{$version_string1\};/; |
||||
$data =~ s/ int majnum = \d*, minnum = \d*, relnum = \d*;/ $version_string2;/; |
||||
|
||||
write_file($TESTH5_JAVA, $data); |
||||
} |
||||
|
||||
# Update the tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl file |
||||
if ($REPACK_LAYOUT_PLUGIN_VERSION) { |
||||
my $data = read_file($REPACK_LAYOUT_PLUGIN_VERSION); |
||||
my $version_string = sprintf("%d %d %d", @newver[0,1,2]); |
||||
|
||||
$data =~ s/ PARAMS \{ 9 \d* \d* \d* \}/ PARAMS \{ 9 $version_string \}/g; |
||||
|
||||
write_file($REPACK_LAYOUT_PLUGIN_VERSION, $data); |
||||
} |
||||
|
||||
# helper function to read the file for updating c++/src/cpp_doc_config, |
||||
# config/cmake/scripts/HDF5Config.cmake, and java files. |
||||
# The version string in that file is not at the top, so the string replacement |
||||
# is not for the first line, and reading/writing the entire file as one string |
||||
# facilitates the substring replacement. |
||||
#Presumably these will also work for resetting the version in HDF5config.cmake. |
||||
sub read_file { |
||||
my ($filename) = @_; |
||||
|
||||
open my $in, $filename or die "Could not open '$filename' for reading $!"; |
||||
local $/ = undef; |
||||
my $all = <$in>; |
||||
close $in; |
||||
|
||||
return $all; |
||||
} |
||||
|
||||
# helper function to write the file for updating c++/src/cpp_doc_config, |
||||
# config/cmake/scripts/HDF5config.cmake and java files. |
||||
sub write_file { |
||||
my ($filename, $content) = @_; |
||||
|
||||
open my $out, ">$filename" or die "Could not open '$filename' for writing $!";; |
||||
print $out $content; |
||||
close $out; |
||||
|
||||
return; |
||||
} |
||||
|
||||
|
||||
sub gen_configure { |
||||
my ($name, $conf) = @_; |
||||
|
||||
open FILE, $conf or die "$conf: $!\n"; |
||||
my @contents = <FILE>; |
||||
close FILE; |
||||
|
||||
for (my $i = 0; $i < $#contents; ++$i) { |
||||
if ($contents[$i] =~ /^AC_INIT/) { |
||||
$contents[$i] = sprintf("AC_INIT([$name], [%d.%d.%d%s], [help\@hdfgroup.org])\n", |
||||
@newver[0,1,2], |
||||
$newver[3] eq "" ? "" : "-".$newver[3]); |
||||
last; |
||||
} |
||||
} |
||||
|
||||
open FILE, ">$conf" or die "$conf: $!\n"; |
||||
print FILE @contents; |
||||
close FILE; |
||||
|
||||
$conf =~ /^(.*?)\/?configure.ac$/; |
||||
|
||||
if ($1) { |
||||
$rc = system("cd $1 && ./autogen.sh >/dev/null 2>/dev/null && rm -rf autom4te.cache"); |
||||
} else { |
||||
$rc = system("./autogen.sh >/dev/null 2>/dev/null && rm -rf autom4te.cache"); |
||||
} |
||||
if ($rc) { |
||||
printf("./autogen.sh failed with exit code %d. Aborted.\n", $rc); |
||||
exit 1; |
||||
} |
||||
} |
||||
|
||||
# Update the configure.ac files and regenerate them |
||||
gen_configure("HDF5", $CONFIGURE) if $CONFIGURE; |
||||
|
||||
sub gen_h5pubconf { |
||||
my ($name, $pubconf, @vers) = @_; |
||||
|
||||
my $namelc = lc($name); |
||||
my $nameuc = uc($name); |
||||
|
||||
open FILE, $pubconf or die "$pubconf: $!\n"; |
||||
my @contents = <FILE>; |
||||
close FILE; |
||||
|
||||
for (my $i = 0; $i < $#contents; ++$i) { |
||||
if ($contents[$i] =~ /\#\s*define\s+H5_PACKAGE\s+/) { |
||||
$contents[$i] = "\#define H5_PACKAGE \"$namelc\"\n"; |
||||
} elsif ($contents[$i] =~ /\#\s*define\s+H5_PACKAGE_NAME\s+/) { |
||||
$contents[$i] = "\#define H5_PACKAGE_NAME \"$nameuc\"\n"; |
||||
} elsif ($contents[$i] =~ /\#\s*define\s+H5_PACKAGE_STRING\s+/) { |
||||
$contents[$i] = sprintf("\#define H5_PACKAGE_STRING \"$nameuc %d.%d.%d%s\"\n", |
||||
@vers[0,1,2], |
||||
$newver[3] eq "" ? "" : "-".$newver[3]); |
||||
} elsif ($contents[$i] =~ /\#\s*define\s+H5_PACKAGE_TARNAME\s+/) { |
||||
$contents[$i] = "\#define H5_PACKAGE_TARNAME \"$namelc\"\n"; |
||||
} elsif ($contents[$i] =~ /\#\s*define\s+H5_PACKAGE_VERSION\s+/) { |
||||
$contents[$i] = sprintf("\#define H5_PACKAGE_VERSION \"%d.%d.%d%s\"\n", |
||||
@vers[0,1,2], |
||||
$newver[3] eq "" ? "" : "-".$newver[3]); |
||||
} elsif ($contents[$i] =~ /\#\s*define\s+H5_VERSION\s+/) { |
||||
$contents[$i] = sprintf("\#define H5_VERSION \"%d.%d.%d%s\"\n", |
||||
@vers[0,1,2], |
||||
$newver[3] eq "" ? "" : "-".$newver[3]); |
||||
} |
||||
} |
||||
|
||||
open FILE, ">$pubconf" or die "$pubconf: $!\n"; |
||||
print FILE @contents; |
||||
close FILE; |
||||
} |
||||
|
||||
# Print the new version number |
||||
if ($verbose) { |
||||
printf("version %d.%d release %d%s\n", @newver[0,1,2], |
||||
$newver[3] eq "" ? "" : " (".$newver[3].")"); |
||||
} else { |
||||
printf("%d.%d.%d%s\n", @newver[0,1,2], |
||||
$newver[3] eq "" ? "" : "-".$newver[3]); |
||||
} |
||||
|
||||
exit 0; |
||||
|
||||
# Because the first line of this file looks like a Bourne shell script, we |
||||
# must tell XEmacs explicitly that this is really a perl script. |
||||
# |
||||
# Local Variables: |
||||
# mode:perl |
||||
# End: |
||||
@ -0,0 +1,529 @@ |
||||
#!/bin/sh |
||||
# install - install a program, script, or datafile |
||||
|
||||
scriptversion=2018-03-11.20; # UTC |
||||
|
||||
# This originates from X11R5 (mit/util/scripts/install.sh), which was |
||||
# later released in X11R6 (xc/config/util/install.sh) with the |
||||
# following copyright and license. |
||||
# |
||||
# Copyright (C) 1994 X Consortium |
||||
# |
||||
# Permission is hereby granted, free of charge, to any person obtaining a copy |
||||
# of this software and associated documentation files (the "Software"), to |
||||
# deal in the Software without restriction, including without limitation the |
||||
# rights to use, copy, modify, merge, publish, distribute, sublicense, and/or |
||||
# sell copies of the Software, and to permit persons to whom the Software is |
||||
# furnished to do so, subject to the following conditions: |
||||
# |
||||
# The above copyright notice and this permission notice shall be included in |
||||
# all copies or substantial portions of the Software. |
||||
# |
||||
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR |
||||
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, |
||||
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE |
||||
# X CONSORTIUM BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN |
||||
# AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNEC- |
||||
# TION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. |
||||
# |
||||
# Except as contained in this notice, the name of the X Consortium shall not |
||||
# be used in advertising or otherwise to promote the sale, use or other deal- |
||||
# ings in this Software without prior written authorization from the X Consor- |
||||
# tium. |
||||
# |
||||
# |
||||
# FSF changes to this file are in the public domain. |
||||
# |
||||
# Calling this script install-sh is preferred over install.sh, to prevent |
||||
# 'make' implicit rules from creating a file called install from it |
||||
# when there is no Makefile. |
||||
# |
||||
# This script is compatible with the BSD install script, but was written |
||||
# from scratch. |
||||
|
||||
tab=' ' |
||||
nl=' |
||||
' |
||||
IFS=" $tab$nl" |
||||
|
||||
# Set DOITPROG to "echo" to test this script. |
||||
|
||||
doit=${DOITPROG-} |
||||
doit_exec=${doit:-exec} |
||||
|
||||
# Put in absolute file names if you don't have them in your path; |
||||
# or use environment vars. |
||||
|
||||
chgrpprog=${CHGRPPROG-chgrp} |
||||
chmodprog=${CHMODPROG-chmod} |
||||
chownprog=${CHOWNPROG-chown} |
||||
cmpprog=${CMPPROG-cmp} |
||||
cpprog=${CPPROG-cp} |
||||
mkdirprog=${MKDIRPROG-mkdir} |
||||
mvprog=${MVPROG-mv} |
||||
rmprog=${RMPROG-rm} |
||||
stripprog=${STRIPPROG-strip} |
||||
|
||||
posix_mkdir= |
||||
|
||||
# Desired mode of installed file. |
||||
mode=0755 |
||||
|
||||
chgrpcmd= |
||||
chmodcmd=$chmodprog |
||||
chowncmd= |
||||
mvcmd=$mvprog |
||||
rmcmd="$rmprog -f" |
||||
stripcmd= |
||||
|
||||
src= |
||||
dst= |
||||
dir_arg= |
||||
dst_arg= |
||||
|
||||
copy_on_change=false |
||||
is_target_a_directory=possibly |
||||
|
||||
usage="\ |
||||
Usage: $0 [OPTION]... [-T] SRCFILE DSTFILE |
||||
or: $0 [OPTION]... SRCFILES... DIRECTORY |
||||
or: $0 [OPTION]... -t DIRECTORY SRCFILES... |
||||
or: $0 [OPTION]... -d DIRECTORIES... |
||||
|
||||
In the 1st form, copy SRCFILE to DSTFILE. |
||||
In the 2nd and 3rd, copy all SRCFILES to DIRECTORY. |
||||
In the 4th, create DIRECTORIES. |
||||
|
||||
Options: |
||||
--help display this help and exit. |
||||
--version display version info and exit. |
||||
|
||||
-c (ignored) |
||||
-C install only if different (preserve the last data modification time) |
||||
-d create directories instead of installing files. |
||||
-g GROUP $chgrpprog installed files to GROUP. |
||||
-m MODE $chmodprog installed files to MODE. |
||||
-o USER $chownprog installed files to USER. |
||||
-s $stripprog installed files. |
||||
-t DIRECTORY install into DIRECTORY. |
||||
-T report an error if DSTFILE is a directory. |
||||
|
||||
Environment variables override the default commands: |
||||
CHGRPPROG CHMODPROG CHOWNPROG CMPPROG CPPROG MKDIRPROG MVPROG |
||||
RMPROG STRIPPROG |
||||
" |
||||
|
||||
while test $# -ne 0; do |
||||
case $1 in |
||||
-c) ;; |
||||
|
||||
-C) copy_on_change=true;; |
||||
|
||||
-d) dir_arg=true;; |
||||
|
||||
-g) chgrpcmd="$chgrpprog $2" |
||||
shift;; |
||||
|
||||
--help) echo "$usage"; exit $?;; |
||||
|
||||
-m) mode=$2 |
||||
case $mode in |
||||
*' '* | *"$tab"* | *"$nl"* | *'*'* | *'?'* | *'['*) |
||||
echo "$0: invalid mode: $mode" >&2 |
||||
exit 1;; |
||||
esac |
||||
shift;; |
||||
|
||||
-o) chowncmd="$chownprog $2" |
||||
shift;; |
||||
|
||||
-s) stripcmd=$stripprog;; |
||||
|
||||
-t) |
||||
is_target_a_directory=always |
||||
dst_arg=$2 |
||||
# Protect names problematic for 'test' and other utilities. |
||||
case $dst_arg in |
||||
-* | [=\(\)!]) dst_arg=./$dst_arg;; |
||||
esac |
||||
shift;; |
||||
|
||||
-T) is_target_a_directory=never;; |
||||
|
||||
--version) echo "$0 $scriptversion"; exit $?;; |
||||
|
||||
--) shift |
||||
break;; |
||||
|
||||
-*) echo "$0: invalid option: $1" >&2 |
||||
exit 1;; |
||||
|
||||
*) break;; |
||||
esac |
||||
shift |
||||
done |
||||
|
||||
# We allow the use of options -d and -T together, by making -d |
||||
# take the precedence; this is for compatibility with GNU install. |
||||
|
||||
if test -n "$dir_arg"; then |
||||
if test -n "$dst_arg"; then |
||||
echo "$0: target directory not allowed when installing a directory." >&2 |
||||
exit 1 |
||||
fi |
||||
fi |
||||
|
||||
if test $# -ne 0 && test -z "$dir_arg$dst_arg"; then |
||||
# When -d is used, all remaining arguments are directories to create. |
||||
# When -t is used, the destination is already specified. |
||||
# Otherwise, the last argument is the destination. Remove it from $@. |
||||
for arg |
||||
do |
||||
if test -n "$dst_arg"; then |
||||
# $@ is not empty: it contains at least $arg. |
||||
set fnord "$@" "$dst_arg" |
||||
shift # fnord |
||||
fi |
||||
shift # arg |
||||
dst_arg=$arg |
||||
# Protect names problematic for 'test' and other utilities. |
||||
case $dst_arg in |
||||
-* | [=\(\)!]) dst_arg=./$dst_arg;; |
||||
esac |
||||
done |
||||
fi |
||||
|
||||
if test $# -eq 0; then |
||||
if test -z "$dir_arg"; then |
||||
echo "$0: no input file specified." >&2 |
||||
exit 1 |
||||
fi |
||||
# It's OK to call 'install-sh -d' without argument. |
||||
# This can happen when creating conditional directories. |
||||
exit 0 |
||||
fi |
||||
|
||||
if test -z "$dir_arg"; then |
||||
if test $# -gt 1 || test "$is_target_a_directory" = always; then |
||||
if test ! -d "$dst_arg"; then |
||||
echo "$0: $dst_arg: Is not a directory." >&2 |
||||
exit 1 |
||||
fi |
||||
fi |
||||
fi |
||||
|
||||
if test -z "$dir_arg"; then |
||||
do_exit='(exit $ret); exit $ret' |
||||
trap "ret=129; $do_exit" 1 |
||||
trap "ret=130; $do_exit" 2 |
||||
trap "ret=141; $do_exit" 13 |
||||
trap "ret=143; $do_exit" 15 |
||||
|
||||
# Set umask so as not to create temps with too-generous modes. |
||||
# However, 'strip' requires both read and write access to temps. |
||||
case $mode in |
||||
# Optimize common cases. |
||||
*644) cp_umask=133;; |
||||
*755) cp_umask=22;; |
||||
|
||||
*[0-7]) |
||||
if test -z "$stripcmd"; then |
||||
u_plus_rw= |
||||
else |
||||
u_plus_rw='% 200' |
||||
fi |
||||
cp_umask=`expr '(' 777 - $mode % 1000 ')' $u_plus_rw`;; |
||||
*) |
||||
if test -z "$stripcmd"; then |
||||
u_plus_rw= |
||||
else |
||||
u_plus_rw=,u+rw |
||||
fi |
||||
cp_umask=$mode$u_plus_rw;; |
||||
esac |
||||
fi |
||||
|
||||
for src |
||||
do |
||||
# Protect names problematic for 'test' and other utilities. |
||||
case $src in |
||||
-* | [=\(\)!]) src=./$src;; |
||||
esac |
||||
|
||||
if test -n "$dir_arg"; then |
||||
dst=$src |
||||
dstdir=$dst |
||||
test -d "$dstdir" |
||||
dstdir_status=$? |
||||
else |
||||
|
||||
# Waiting for this to be detected by the "$cpprog $src $dsttmp" command |
||||
# might cause directories to be created, which would be especially bad |
||||
# if $src (and thus $dsttmp) contains '*'. |
||||
if test ! -f "$src" && test ! -d "$src"; then |
||||
echo "$0: $src does not exist." >&2 |
||||
exit 1 |
||||
fi |
||||
|
||||
if test -z "$dst_arg"; then |
||||
echo "$0: no destination specified." >&2 |
||||
exit 1 |
||||
fi |
||||
dst=$dst_arg |
||||
|
||||
# If destination is a directory, append the input filename. |
||||
if test -d "$dst"; then |
||||
if test "$is_target_a_directory" = never; then |
||||
echo "$0: $dst_arg: Is a directory" >&2 |
||||
exit 1 |
||||
fi |
||||
dstdir=$dst |
||||
dstbase=`basename "$src"` |
||||
case $dst in |
||||
*/) dst=$dst$dstbase;; |
||||
*) dst=$dst/$dstbase;; |
||||
esac |
||||
dstdir_status=0 |
||||
else |
||||
dstdir=`dirname "$dst"` |
||||
test -d "$dstdir" |
||||
dstdir_status=$? |
||||
fi |
||||
fi |
||||
|
||||
case $dstdir in |
||||
*/) dstdirslash=$dstdir;; |
||||
*) dstdirslash=$dstdir/;; |
||||
esac |
||||
|
||||
obsolete_mkdir_used=false |
||||
|
||||
if test $dstdir_status != 0; then |
||||
case $posix_mkdir in |
||||
'') |
||||
# Create intermediate dirs using mode 755 as modified by the umask. |
||||
# This is like FreeBSD 'install' as of 1997-10-28. |
||||
umask=`umask` |
||||
case $stripcmd.$umask in |
||||
# Optimize common cases. |
||||
*[2367][2367]) mkdir_umask=$umask;; |
||||
.*0[02][02] | .[02][02] | .[02]) mkdir_umask=22;; |
||||
|
||||
*[0-7]) |
||||
mkdir_umask=`expr $umask + 22 \ |
||||
- $umask % 100 % 40 + $umask % 20 \ |
||||
- $umask % 10 % 4 + $umask % 2 |
||||
`;; |
||||
*) mkdir_umask=$umask,go-w;; |
||||
esac |
||||
|
||||
# With -d, create the new directory with the user-specified mode. |
||||
# Otherwise, rely on $mkdir_umask. |
||||
if test -n "$dir_arg"; then |
||||
mkdir_mode=-m$mode |
||||
else |
||||
mkdir_mode= |
||||
fi |
||||
|
||||
posix_mkdir=false |
||||
case $umask in |
||||
*[123567][0-7][0-7]) |
||||
# POSIX mkdir -p sets u+wx bits regardless of umask, which |
||||
# is incompatible with FreeBSD 'install' when (umask & 300) != 0. |
||||
;; |
||||
*) |
||||
# Note that $RANDOM variable is not portable (e.g. dash); Use it |
||||
# here however when possible just to lower collision chance. |
||||
tmpdir=${TMPDIR-/tmp}/ins$RANDOM-$$ |
||||
|
||||
trap 'ret=$?; rmdir "$tmpdir/a/b" "$tmpdir/a" "$tmpdir" 2>/dev/null; exit $ret' 0 |
||||
|
||||
# Because "mkdir -p" follows existing symlinks and we likely work |
||||
# directly in world-writeable /tmp, make sure that the '$tmpdir' |
||||
# directory is successfully created first before we actually test |
||||
# 'mkdir -p' feature. |
||||
if (umask $mkdir_umask && |
||||
$mkdirprog $mkdir_mode "$tmpdir" && |
||||
exec $mkdirprog $mkdir_mode -p -- "$tmpdir/a/b") >/dev/null 2>&1 |
||||
then |
||||
if test -z "$dir_arg" || { |
||||
# Check for POSIX incompatibilities with -m. |
||||
# HP-UX 11.23 and IRIX 6.5 mkdir -m -p sets group- or |
||||
# other-writable bit of parent directory when it shouldn't. |
||||
# FreeBSD 6.1 mkdir -m -p sets mode of existing directory. |
||||
test_tmpdir="$tmpdir/a" |
||||
ls_ld_tmpdir=`ls -ld "$test_tmpdir"` |
||||
case $ls_ld_tmpdir in |
||||
d????-?r-*) different_mode=700;; |
||||
d????-?--*) different_mode=755;; |
||||
*) false;; |
||||
esac && |
||||
$mkdirprog -m$different_mode -p -- "$test_tmpdir" && { |
||||
ls_ld_tmpdir_1=`ls -ld "$test_tmpdir"` |
||||
test "$ls_ld_tmpdir" = "$ls_ld_tmpdir_1" |
||||
} |
||||
} |
||||
then posix_mkdir=: |
||||
fi |
||||
rmdir "$tmpdir/a/b" "$tmpdir/a" "$tmpdir" |
||||
else |
||||
# Remove any dirs left behind by ancient mkdir implementations. |
||||
rmdir ./$mkdir_mode ./-p ./-- "$tmpdir" 2>/dev/null |
||||
fi |
||||
trap '' 0;; |
||||
esac;; |
||||
esac |
||||
|
||||
if |
||||
$posix_mkdir && ( |
||||
umask $mkdir_umask && |
||||
$doit_exec $mkdirprog $mkdir_mode -p -- "$dstdir" |
||||
) |
||||
then : |
||||
else |
||||
|
||||
# The umask is ridiculous, or mkdir does not conform to POSIX, |
||||
# or it failed possibly due to a race condition. Create the |
||||
# directory the slow way, step by step, checking for races as we go. |
||||
|
||||
case $dstdir in |
||||
/*) prefix='/';; |
||||
[-=\(\)!]*) prefix='./';; |
||||
*) prefix='';; |
||||
esac |
||||
|
||||
oIFS=$IFS |
||||
IFS=/ |
||||
set -f |
||||
set fnord $dstdir |
||||
shift |
||||
set +f |
||||
IFS=$oIFS |
||||
|
||||
prefixes= |
||||
|
||||
for d |
||||
do |
||||
test X"$d" = X && continue |
||||
|
||||
prefix=$prefix$d |
||||
if test -d "$prefix"; then |
||||
prefixes= |
||||
else |
||||
if $posix_mkdir; then |
||||
(umask=$mkdir_umask && |
||||
$doit_exec $mkdirprog $mkdir_mode -p -- "$dstdir") && break |
||||
# Don't fail if two instances are running concurrently. |
||||
test -d "$prefix" || exit 1 |
||||
else |
||||
case $prefix in |
||||
*\'*) qprefix=`echo "$prefix" | sed "s/'/'\\\\\\\\''/g"`;; |
||||
*) qprefix=$prefix;; |
||||
esac |
||||
prefixes="$prefixes '$qprefix'" |
||||
fi |
||||
fi |
||||
prefix=$prefix/ |
||||
done |
||||
|
||||
if test -n "$prefixes"; then |
||||
# Don't fail if two instances are running concurrently. |
||||
(umask $mkdir_umask && |
||||
eval "\$doit_exec \$mkdirprog $prefixes") || |
||||
test -d "$dstdir" || exit 1 |
||||
obsolete_mkdir_used=true |
||||
fi |
||||
fi |
||||
fi |
||||
|
||||
if test -n "$dir_arg"; then |
||||
{ test -z "$chowncmd" || $doit $chowncmd "$dst"; } && |
||||
{ test -z "$chgrpcmd" || $doit $chgrpcmd "$dst"; } && |
||||
{ test "$obsolete_mkdir_used$chowncmd$chgrpcmd" = false || |
||||
test -z "$chmodcmd" || $doit $chmodcmd $mode "$dst"; } || exit 1 |
||||
else |
||||
|
||||
# Make a couple of temp file names in the proper directory. |
||||
dsttmp=${dstdirslash}_inst.$$_ |
||||
rmtmp=${dstdirslash}_rm.$$_ |
||||
|
||||
# Trap to clean up those temp files at exit. |
||||
trap 'ret=$?; rm -f "$dsttmp" "$rmtmp" && exit $ret' 0 |
||||
|
||||
# Copy the file name to the temp name. |
||||
(umask $cp_umask && |
||||
{ test -z "$stripcmd" || { |
||||
# Create $dsttmp read-write so that cp doesn't create it read-only, |
||||
# which would cause strip to fail. |
||||
if test -z "$doit"; then |
||||
: >"$dsttmp" # No need to fork-exec 'touch'. |
||||
else |
||||
$doit touch "$dsttmp" |
||||
fi |
||||
} |
||||
} && |
||||
$doit_exec $cpprog "$src" "$dsttmp") && |
||||
|
||||
# and set any options; do chmod last to preserve setuid bits. |
||||
# |
||||
# If any of these fail, we abort the whole thing. If we want to |
||||
# ignore errors from any of these, just make sure not to ignore |
||||
# errors from the above "$doit $cpprog $src $dsttmp" command. |
||||
# |
||||
{ test -z "$chowncmd" || $doit $chowncmd "$dsttmp"; } && |
||||
{ test -z "$chgrpcmd" || $doit $chgrpcmd "$dsttmp"; } && |
||||
{ test -z "$stripcmd" || $doit $stripcmd "$dsttmp"; } && |
||||
{ test -z "$chmodcmd" || $doit $chmodcmd $mode "$dsttmp"; } && |
||||
|
||||
# If -C, don't bother to copy if it wouldn't change the file. |
||||
if $copy_on_change && |
||||
old=`LC_ALL=C ls -dlL "$dst" 2>/dev/null` && |
||||
new=`LC_ALL=C ls -dlL "$dsttmp" 2>/dev/null` && |
||||
set -f && |
||||
set X $old && old=:$2:$4:$5:$6 && |
||||
set X $new && new=:$2:$4:$5:$6 && |
||||
set +f && |
||||
test "$old" = "$new" && |
||||
$cmpprog "$dst" "$dsttmp" >/dev/null 2>&1 |
||||
then |
||||
rm -f "$dsttmp" |
||||
else |
||||
# Rename the file to the real destination. |
||||
$doit $mvcmd -f "$dsttmp" "$dst" 2>/dev/null || |
||||
|
||||
# The rename failed, perhaps because mv can't rename something else |
||||
# to itself, or perhaps because mv is so ancient that it does not |
||||
# support -f. |
||||
{ |
||||
# Now remove or move aside any old file at destination location. |
||||
# We try this two ways since rm can't unlink itself on some |
||||
# systems and the destination file might be busy for other |
||||
# reasons. In this case, the final cleanup might fail but the new |
||||
# file should still install successfully. |
||||
{ |
||||
test ! -f "$dst" || |
||||
$doit $rmcmd -f "$dst" 2>/dev/null || |
||||
{ $doit $mvcmd -f "$dst" "$rmtmp" 2>/dev/null && |
||||
{ $doit $rmcmd -f "$rmtmp" 2>/dev/null; :; } |
||||
} || |
||||
{ echo "$0: cannot unlink or rename $dst" >&2 |
||||
(exit 1); exit 1 |
||||
} |
||||
} && |
||||
|
||||
# Now rename the file to the real destination. |
||||
$doit $mvcmd "$dsttmp" "$dst" |
||||
} |
||||
fi || exit 1 |
||||
|
||||
trap '' 0 |
||||
fi |
||||
done |
||||
|
||||
# Local variables: |
||||
# eval: (add-hook 'before-save-hook 'time-stamp) |
||||
# time-stamp-start: "scriptversion=" |
||||
# time-stamp-format: "%:y-%02m-%02d.%02H" |
||||
# time-stamp-time-zone: "UTC0" |
||||
# time-stamp-end: "; # UTC" |
||||
# End: |
||||
@ -0,0 +1,96 @@ |
||||
#!/usr/bin/env perl |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# Usage: pipe the output of Linux's `strace' program into the stdin of |
||||
# this command, and the output of this command into gnuplot. |
||||
|
||||
my ($fast,$npasses); |
||||
if ($ARGV[0] =~ /^--?fast$/) { |
||||
$fast = 1; |
||||
shift; |
||||
} |
||||
|
||||
my $filename = shift || "tstab2.h5"; |
||||
my $total = 0; |
||||
my %What; # What{pos}{nbytes}{r|w} = naccesses |
||||
my($total_writes, $total_bytes_out, $total_reads, $total_bytes_in); |
||||
|
||||
while (<>) { |
||||
if (!defined $fd) { |
||||
if (/^open\("(.*?)".*=\s+(\d+)/ && $1 eq $filename) { |
||||
$fd = $2; |
||||
$pos = 0; |
||||
} |
||||
} elsif (/^close\((\d+)/ && $1==$fd) { |
||||
$fd = undef; |
||||
} elsif (!$fast && |
||||
/^lseek\((\d+), -?\d+,.*= (\d+)/ && |
||||
$1==$fd && $2>=0) { |
||||
$pos = $2; |
||||
} elsif (!$fast && /^lseek\((\d+),/ && $1==$fd) { |
||||
die $_; |
||||
} elsif (/^write\((\d+), ".*?"(\.\.\.)?, \d+\)\s*= (\d+)/ && |
||||
$1==$fd && $3>=0) { |
||||
my $nbytes = $3; |
||||
if ($fast) { |
||||
$total_writes++; |
||||
$total_bytes_out += $nbytes; |
||||
} else { |
||||
$What{$pos}{$nbytes}{w}++; |
||||
printf "%d %d\n", $total, $pos; |
||||
$pos += $nbytes; |
||||
$total += $nbytes; |
||||
} |
||||
} elsif (/^write\((\d+),/ && $1==$fd) { |
||||
die $_; |
||||
} elsif (/^read\((\d+), ".*?"(\.\.\.)?, \d+\)\s*= (\d+)/ && |
||||
$1==$fd && $3>=0) { |
||||
my $nbytes = $3; |
||||
if ($fast) { |
||||
$total_reads++; |
||||
$total_bytes_in += $nbytes; |
||||
} else { |
||||
$What{$pos}{$nbytes}{r}++; |
||||
printf "%d %d\n", $total, $pos; |
||||
$pos += $nbytes; |
||||
$total += $nbytes; |
||||
} |
||||
} elsif (/^read\((\d+),/ && $1==$fd) { |
||||
die $_; |
||||
} |
||||
} |
||||
|
||||
|
||||
if (!$fast) { |
||||
print "="x36, "\n"; |
||||
printf "%8s %8s %8s %8s\n","Position","NBytes","NReads","NWrites"; |
||||
for $pos (sort {$a<=>$b} keys %What) { |
||||
for $nbytes (sort {$a<=>$b} keys %{$What{$pos}}) { |
||||
printf("%8d %8d %8d %8d\n", $pos, $nbytes, |
||||
$What{$pos}{$nbytes}{r}, |
||||
$What{$pos}{$nbytes}{w}); |
||||
$total_writes += $What{$pos}{$nbytes}{w}; |
||||
$total_reads += $What{$pos}{$nbytes}{r}; |
||||
$total_bytes_out += $What{$pos}{$nbytes}{w} * $nbytes; |
||||
$total_bytes_in += $What{$pos}{$nbytes}{r} * $nbytes; |
||||
} |
||||
} |
||||
} |
||||
|
||||
print "="x36, "\n"; |
||||
printf("Write: %8d calls, %10d total bytes, %10g average bytes\n", |
||||
$total_writes, $total_bytes_out, $total_bytes_out/$total_writes) |
||||
if $total_writes; |
||||
printf("Read: %8d calls, %10d total bytes, %10g average bytes\n", |
||||
$total_reads, $total_bytes_in, $total_bytes_in/$total_reads) |
||||
if $total_reads; |
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,397 @@ |
||||
#!/usr/bin/env perl |
||||
require 5.003; |
||||
$indent=4; |
||||
use warnings; |
||||
|
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# Create error headers |
||||
# |
||||
# Read in the error description text file and create the appropriate headers |
||||
# needed by the library. |
||||
# |
||||
# Programmer: Quincey Koziol |
||||
# Creation Date: 2003/08/12 |
||||
|
||||
############################################################################## |
||||
# Print the copyright into an open file |
||||
# |
||||
sub print_copyright ($) { |
||||
my $fh = shift; |
||||
|
||||
print $fh "/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *\n"; |
||||
print $fh " * Copyright by The HDF Group. *\n"; |
||||
print $fh " * All rights reserved. *\n"; |
||||
print $fh " * *\n"; |
||||
print $fh " * This file is part of HDF5. The full HDF5 copyright notice, including *\n"; |
||||
print $fh " * terms governing use, modification, and redistribution, is contained in *\n"; |
||||
print $fh " * the COPYING file, which can be found at the root of the source code *\n"; |
||||
print $fh " * distribution tree, or in https://www.hdfgroup.org/licenses. *\n"; |
||||
print $fh " * If you do not have access to either file, you may request a copy from *\n"; |
||||
print $fh " * help\@hdfgroup.org. *\n"; |
||||
print $fh " * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print the "do not change this file" warning |
||||
# |
||||
sub print_warning ($) { |
||||
my $fh = shift; |
||||
|
||||
print $fh "\n/* Generated automatically by bin/make_err -- do not edit */\n"; |
||||
print $fh "/* Add new errors to H5err.txt file */\n\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print start of ifdef's to prevent a file from being re-included |
||||
# |
||||
sub print_startprotect ($$) { |
||||
my ($fh, $file) = @_; |
||||
|
||||
# Clip off the ".h" part of the name |
||||
$file =~ s/(\w*)\.h/$1/; |
||||
|
||||
# Print the ifdef info |
||||
print $fh "\n#ifndef ${file}_H\n"; |
||||
print $fh "#define ${file}_H\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print end of ifdef's to prevent a file from being re-included |
||||
# |
||||
sub print_endprotect ($$) { |
||||
my ($fh, $file) = @_; |
||||
|
||||
# Clip off the ".h" part of the name |
||||
$file =~ s/(\w*)\.h/$1/; |
||||
|
||||
# Print the endif info |
||||
print $fh "\n#endif /* ${file}_H */\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Parse a meaningful line (not a comment or blank line) into the appropriate |
||||
# data structure |
||||
# |
||||
sub parse_line ($) { |
||||
my $line = shift; # Get the line to parse |
||||
my $name; # The name of the error message |
||||
my $desc; # The description of the error message |
||||
|
||||
# Parse major error lines |
||||
#print "line=$line\n"; |
||||
if($line =~ /^\s*MAJOR,/) { |
||||
# Get the major error's name & description |
||||
($name, $desc) = ($line =~ /^\s*MAJOR,\s*(\w*),\s*(.*)\n/); |
||||
#print "MAJOR: name=$name, desc=$desc\n"; |
||||
|
||||
# Check if the name already exists as a major or minor error message |
||||
if(exists($major{$name}) || exists($minor{$name})) { |
||||
die "duplicated name: $name"; |
||||
} |
||||
|
||||
# Store the major errors in a hash table, indexed by the name |
||||
$major{$name}=$desc; |
||||
} |
||||
# Parse minor error lines |
||||
elsif($line =~ /^\s*MINOR,/) { |
||||
my $min_section; # Minor errors have a section they below to also |
||||
|
||||
# Get the minor error's section, name & description |
||||
($min_section, $name, $desc) = ($line =~ /^\s*MINOR,\s*(\w*),\s*(\w*),\s*(.*)\n/); |
||||
#print "MINOR: min_section=$min_section, name=$name, desc=$desc\n"; |
||||
|
||||
# Check for valid section |
||||
if(!exists($section{$min_section})) { |
||||
die "unknown section: $min_section"; |
||||
} |
||||
|
||||
# Check if the name already exists as a major or minor error message |
||||
if(exists($major{$name}) || exists($minor{$name})) { |
||||
die "duplicated name: $name"; |
||||
} |
||||
|
||||
# Store the minor errors in a hash table, indexed by the name |
||||
$minor{$name}=$desc; |
||||
|
||||
# Add the minor error to the list for the section |
||||
push @{$section_list{$min_section}}, $name; |
||||
} |
||||
# Parse section lines |
||||
elsif($line =~ /^\s*SECTION,/) { |
||||
# Get the section's name & description |
||||
($name, $desc) = ($line =~ /^\s*SECTION,\s*(\w*),\s*(.*)\n/); |
||||
#print "SECTION: name=$name, desc=$desc\n"; |
||||
|
||||
# Check if the section has already been defined |
||||
if(exists($section{$name})) { |
||||
die "duplicated name: $name"; |
||||
} |
||||
|
||||
# Store the section in a hash table, indexed by the name |
||||
$section{$name}=$desc; |
||||
} |
||||
# Unknown keyword |
||||
else { |
||||
die "unknown keyword: $line"; |
||||
} |
||||
} |
||||
|
||||
############################################################################## |
||||
# Create the generated portion of the public header file |
||||
# |
||||
sub create_public ($) { |
||||
my $prefix = shift; # Get the prefix for the generated file |
||||
my $file = "H5Epubgen.h"; # Name of file to generate |
||||
my $name; # Name of error message |
||||
my $desc; # Description of error message |
||||
my $sect_name; # Section of minor error messages |
||||
my $sect_desc; # Description of section |
||||
|
||||
# Rename previous file |
||||
# rename "${prefix}${file}", "${prefix}${file}~" or die "unable to make backup"; |
||||
|
||||
# Open new header file |
||||
open HEADER, ">${prefix}${file}" or die "unable to modify source"; |
||||
|
||||
# Create file contents |
||||
|
||||
print_copyright(*HEADER); |
||||
print_warning(*HEADER); |
||||
print_startprotect(*HEADER, $file); |
||||
|
||||
# Begin extern C block |
||||
print HEADER "\n"; |
||||
print HEADER "#ifdef __cplusplus\n"; |
||||
print HEADER "extern \"C\" {\n"; |
||||
print HEADER "#endif\n"; |
||||
|
||||
# Iterate over all the major errors |
||||
print HEADER "\n/*********************/\n"; |
||||
print HEADER "/* Major error codes */\n"; |
||||
print HEADER "/*********************/\n\n"; |
||||
foreach $name (keys %major) { |
||||
printf HEADER "#define %-20s (H5OPEN %s_g)\n",$name,$name; |
||||
} |
||||
foreach $name (keys %major) { |
||||
printf HEADER "H5_DLLVAR hid_t %-20s /* %s */\n","${name}_g;",$major{$name}; |
||||
} |
||||
|
||||
# Iterate over all the minor error sections |
||||
print HEADER "\n/*********************/\n"; |
||||
print HEADER "/* Minor error codes */\n"; |
||||
print HEADER "/*********************/\n"; |
||||
while ( ($sect_name, $sect_desc) = each (%section)) { |
||||
print HEADER "\n/* $sect_desc */\n"; |
||||
|
||||
# Iterate over all the minor errors in each section |
||||
for $name ( @{$section_list{$sect_name}}) { |
||||
printf HEADER "#define %-20s (H5OPEN %s_g)\n",$name,$name; |
||||
} |
||||
for $name ( @{$section_list{$sect_name}}) { |
||||
printf HEADER "H5_DLLVAR hid_t %-20s /* %s */\n","${name}_g;",$minor{$name}; |
||||
} |
||||
} |
||||
|
||||
# End extern C block |
||||
print HEADER "\n"; |
||||
print HEADER "#ifdef __cplusplus\n"; |
||||
print HEADER "}\n"; |
||||
print HEADER "#endif\n"; |
||||
|
||||
print_endprotect(*HEADER, $file); |
||||
|
||||
# Close header file |
||||
close HEADER; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Create the generated portion of the H5E initialization code |
||||
# |
||||
sub create_init ($) { |
||||
my $prefix = shift; # Get the prefix for the generated file |
||||
my $file = "H5Einit.h"; # Name of file to generate |
||||
my $name; # Name of error message |
||||
my $desc; # Description of error message |
||||
my $sect_name; # Section of minor error messages |
||||
my $sect_desc; # Description of section |
||||
|
||||
# Rename previous file |
||||
# rename "${prefix}${file}", "${prefix}${file}~" or die "unable to make backup"; |
||||
|
||||
# Open new header file |
||||
open HEADER, ">${prefix}${file}" or die "unable to modify source"; |
||||
|
||||
# Create file contents |
||||
|
||||
print_copyright(*HEADER); |
||||
print_warning(*HEADER); |
||||
print_startprotect(*HEADER, $file); |
||||
|
||||
# Iterate over all the major errors |
||||
print HEADER "\n/*********************/\n"; |
||||
print HEADER "/* Major error codes */\n"; |
||||
print HEADER "/*********************/\n\n"; |
||||
foreach $name (keys %major) { |
||||
print HEADER " "x(0*$indent),"HDassert(${name}_g==(-1));\n"; |
||||
print HEADER " "x(0*$indent),"if((msg = H5E__create_msg(cls, H5E_MAJOR, \"${major{$name}}\"))==NULL)\n"; |
||||
print HEADER " "x(1*$indent),"HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, \"error message initialization failed\")\n"; |
||||
print HEADER " "x(0*$indent),"if((${name}_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0)\n"; |
||||
print HEADER " "x(1*$indent),"HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, \"can't register error message\")\n"; |
||||
} |
||||
|
||||
# Iterate over all the minor error sections |
||||
print HEADER "\n/*********************/\n"; |
||||
print HEADER "/* Minor error codes */\n"; |
||||
print HEADER "/*********************/\n\n"; |
||||
while ( ($sect_name, $sect_desc) = each (%section)) { |
||||
print HEADER "\n"," "x(0*$indent),"/* $sect_desc */\n"; |
||||
|
||||
# Iterate over all the minor errors in each section |
||||
for $name ( @{$section_list{$sect_name}}) { |
||||
print HEADER " "x(0*$indent),"HDassert(${name}_g==(-1));\n"; |
||||
print HEADER " "x(0*$indent),"if((msg = H5E__create_msg(cls, H5E_MINOR, \"${minor{$name}}\"))==NULL)\n"; |
||||
print HEADER " "x(1*$indent),"HGOTO_ERROR(H5E_ERROR, H5E_CANTINIT, FAIL, \"error message initialization failed\")\n"; |
||||
print HEADER " "x(0*$indent),"if((${name}_g = H5I_register(H5I_ERROR_MSG, msg, FALSE))<0)\n"; |
||||
print HEADER " "x(1*$indent),"HGOTO_ERROR(H5E_ERROR, H5E_CANTREGISTER, FAIL, \"can't register error message\")\n"; |
||||
} |
||||
} |
||||
|
||||
print_endprotect(*HEADER, $file); |
||||
|
||||
# Close header file |
||||
close HEADER; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Create the generated portion of the H5E termination code |
||||
# |
||||
sub create_term ($) { |
||||
my $prefix = shift; # Get the prefix for the generated file |
||||
my $file = "H5Eterm.h"; # Name of file to generate |
||||
my $name; # Name of error message |
||||
my $desc; # Description of error message |
||||
my $sect_name; # Section of minor error messages |
||||
my $sect_desc; # Description of section |
||||
|
||||
# Rename previous file |
||||
# rename "${prefix}${file}", "${prefix}${file}~" or die "unable to make backup"; |
||||
|
||||
# Open new header file |
||||
open HEADER, ">${prefix}${file}" or die "unable to modify source"; |
||||
|
||||
# Create file contents |
||||
|
||||
print_copyright(*HEADER); |
||||
print_warning(*HEADER); |
||||
print_startprotect(*HEADER, $file); |
||||
|
||||
# Iterate over all the major errors |
||||
print HEADER "\n/* Reset major error IDs */\n"; |
||||
foreach $name (keys %major) { |
||||
print HEADER " "x($indent),"\n${name}_g="; |
||||
} |
||||
print HEADER " (-1);\n"; |
||||
|
||||
# Iterate over all the minor error sections |
||||
print HEADER "\n/* Reset minor error IDs */\n"; |
||||
while ( ($sect_name, $sect_desc) = each (%section)) { |
||||
print HEADER "\n"," "x(0*$indent),"\n/* $sect_desc */"; |
||||
|
||||
# Iterate over all the minor errors in each section |
||||
for $name ( @{$section_list{$sect_name}}) { |
||||
print HEADER " "x($indent),"\n${name}_g="; |
||||
} |
||||
} |
||||
print HEADER " (-1);\n"; |
||||
|
||||
print_endprotect(*HEADER, $file); |
||||
|
||||
# Close header file |
||||
close HEADER; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Create the generated portion of the error code definitions |
||||
# |
||||
sub create_define ($) { |
||||
my $prefix = shift; # Get the prefix for the generated file |
||||
my $file = "H5Edefin.h"; # Name of file to generate |
||||
my $name; # Name of error message |
||||
my $desc; # Description of error message |
||||
my $sect_name; # Section of minor error messages |
||||
my $sect_desc; # Description of section |
||||
|
||||
# Rename previous file |
||||
# rename "${prefix}${file}", "${prefix}${file}~" or die "unable to make backup"; |
||||
|
||||
# Open new header file |
||||
open HEADER, ">${prefix}${file}" or die "unable to modify source"; |
||||
|
||||
# Create file contents |
||||
|
||||
print_copyright(*HEADER); |
||||
print_warning(*HEADER); |
||||
print_startprotect(*HEADER, $file); |
||||
|
||||
# Iterate over all the major errors |
||||
print HEADER "\n/* Major error IDs */\n"; |
||||
foreach $name (keys %major) { |
||||
printf HEADER "hid_t %-20s = FAIL; /* %s */\n","${name}_g",$major{$name}; |
||||
} |
||||
|
||||
# Iterate over all the minor error sections |
||||
print HEADER "\n/* Minor error IDs */\n"; |
||||
while ( ($sect_name, $sect_desc) = each (%section)) { |
||||
print HEADER "\n/* $sect_desc */\n"; |
||||
|
||||
# Iterate over all the minor errors in each section |
||||
for $name ( @{$section_list{$sect_name}}) { |
||||
printf HEADER "hid_t %-20s = FAIL; /* %s */\n","${name}_g",$minor{$name}; |
||||
} |
||||
} |
||||
|
||||
print_endprotect(*HEADER, $file); |
||||
|
||||
# Close header file |
||||
close HEADER; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Read error file (given as command-line argument) in and process it into |
||||
# internal data structures, then create error header files. |
||||
# |
||||
for $file (@ARGV) { |
||||
my $prefix; # Local prefix for generated files |
||||
|
||||
($prefix) = ($file =~ /(^.*\/)/); |
||||
# Read in the entire file |
||||
open SOURCE, $file or die "$file: $!\n"; |
||||
while ( defined ($line=<SOURCE>) ) { |
||||
if(!($line =~ /(^\s*#.*$)|(^\s*$)/)) { |
||||
# Construct data structures for later printing |
||||
parse_line($line); |
||||
} |
||||
} |
||||
close SOURCE; |
||||
|
||||
# Create header files |
||||
print "Generating 'H5Epubgen.h'\n"; |
||||
create_public($prefix); |
||||
print "Generating 'H5Einit.h'\n"; |
||||
create_init($prefix); |
||||
print "Generating 'H5Eterm.h'\n"; |
||||
create_term($prefix); |
||||
print "Generating 'H5Edefin.h'\n"; |
||||
create_define($prefix); |
||||
} |
||||
@ -0,0 +1,214 @@ |
||||
#!/usr/bin/env perl |
||||
require 5.003; |
||||
use strict; |
||||
use warnings; |
||||
|
||||
# Global settings |
||||
|
||||
# List of supported C types to generate overflow assignment code for |
||||
my @ctypes = ( () ); |
||||
|
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# Create assignment overflow #ifdefs |
||||
# |
||||
# Programmer: Quincey Koziol |
||||
# Creation Date: 2009/04/09 |
||||
|
||||
############################################################################## |
||||
# Parse a meaningful line (not a comment or blank line) into the appropriate |
||||
# data structure |
||||
# |
||||
sub parse_line ($) { |
||||
my $line = shift; # Get the line to parse |
||||
|
||||
# Parse get the type name and whether it's signed or unsigned |
||||
#print "line=$line\n"; |
||||
if($line =~ /.*SIGNED\s*;\s*$/ || $line =~ /.*UNSIGNED\s*;\s*$/) { |
||||
my $name; # The name of the type |
||||
my $signed; # Whether the type is signed or not |
||||
|
||||
# Get the type's name & signed status |
||||
($name, $signed) = ($line =~ /^\s*(\w*)\s*,\s*(\w*)\s*;\s*$/); |
||||
#print "name = '$name', signed = '$signed'\n"; |
||||
|
||||
# Append the type to the list of C types already parsed |
||||
push @ctypes, [$name, $signed]; |
||||
|
||||
} |
||||
# Unknown keyword |
||||
else { |
||||
die "unknown keyword: $line"; |
||||
} |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print the copyright into an open file |
||||
# |
||||
sub print_copyright ($) { |
||||
my $fh = shift; |
||||
|
||||
print $fh "/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *\n"; |
||||
print $fh " * Copyright by The HDF Group. *\n"; |
||||
print $fh " * All rights reserved. *\n"; |
||||
print $fh " * *\n"; |
||||
print $fh " * This file is part of HDF5. The full HDF5 copyright notice, including *\n"; |
||||
print $fh " * terms governing use, modification, and redistribution, is contained in *\n"; |
||||
print $fh " * the COPYING file, which can be found at the root of the source code *\n"; |
||||
print $fh " * distribution tree, or in https://www.hdfgroup.org/licenses. *\n"; |
||||
print $fh " * If you do not have access to either file, you may request a copy from *\n"; |
||||
print $fh " * help\@hdfgroup.org. *\n"; |
||||
print $fh " * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print the "do not change this file" warning |
||||
# |
||||
sub print_warning ($) { |
||||
my $fh = shift; |
||||
|
||||
print $fh "\n/* Generated automatically by bin/make_overflow -- do not edit */\n"; |
||||
print $fh "/* Add new types to H5overflow.txt file */\n\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print start of ifdef's to prevent a file from being re-included |
||||
# |
||||
sub print_startprotect ($$) { |
||||
my ($fh, $file) = @_; |
||||
|
||||
# Clip off the ".h" part of the name |
||||
$file =~ s/(\w*)\.h/$1/; |
||||
|
||||
# Print the ifdef info |
||||
print $fh "\n#ifndef ${file}_H\n"; |
||||
print $fh "#define ${file}_H\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print assignment overflow macros for each type |
||||
# |
||||
sub print_typemacros ($) { |
||||
my $fh = shift; # File handle for output file |
||||
my ($src_aref, $dst_aref); # References for each type's information |
||||
|
||||
# Print the descriptive comment |
||||
print $fh "\n\n/* Each type in this file is tested for assignment to the other types,\n"; |
||||
print $fh " * and range checks are defined for bad assignments at run-time.\n"; |
||||
print $fh " */\n"; |
||||
|
||||
for $src_aref (@ctypes) { |
||||
# Print a descriptive comment |
||||
print $fh "\n/* Assignment checks for @$src_aref[0] */\n\n"; |
||||
|
||||
for $dst_aref (@ctypes) { |
||||
if (@$src_aref[0] ne @$dst_aref[0]) { |
||||
# Print a descriptive comment |
||||
print $fh "/* src: @$src_aref[0], dst: @$dst_aref[0] */\n"; |
||||
|
||||
# Print actual type size checks & macro definitions |
||||
print $fh "#if H5_SIZEOF_", uc @$src_aref[0], " < H5_SIZEOF_", uc @$dst_aref[0], "\n"; |
||||
print $fh " #define ASSIGN_", @$src_aref[0], "_TO_", @$dst_aref[0], "(dst, dsttype, src, srctype) \\\n"; |
||||
if ( @$src_aref[1] eq @$dst_aref[1]) { |
||||
print $fh " ASSIGN_TO_LARGER_SIZE_SAME_SIGNED(dst, dsttype, src, srctype)\n"; |
||||
} elsif ( @$src_aref[1] eq "SIGNED") { |
||||
print $fh " ASSIGN_TO_LARGER_SIZE_SIGNED_TO_UNSIGNED(dst, dsttype, src, srctype)\n"; |
||||
} else { |
||||
print $fh " ASSIGN_TO_LARGER_SIZE_UNSIGNED_TO_SIGNED(dst, dsttype, src, srctype)\n"; |
||||
} |
||||
print $fh "#elif H5_SIZEOF_", uc @$src_aref[0], " > H5_SIZEOF_", uc @$dst_aref[0], "\n"; |
||||
print $fh " #define ASSIGN_", @$src_aref[0], "_TO_", @$dst_aref[0], "(dst, dsttype, src, srctype) \\\n"; |
||||
print $fh " ASSIGN_TO_SMALLER_SIZE(dst, dsttype, src, srctype)\n"; |
||||
print $fh "#else /* H5_SIZEOF_", uc @$src_aref[0], " == H5_SIZEOF_", uc @$dst_aref[0], " */\n"; |
||||
print $fh " #define ASSIGN_", @$src_aref[0], "_TO_", @$dst_aref[0], "(dst, dsttype, src, srctype) \\\n"; |
||||
if ( @$src_aref[1] eq @$dst_aref[1]) { |
||||
print $fh " ASSIGN_TO_SAME_SIZE_SAME_SIGNED(dst, dsttype, src, srctype)\n"; |
||||
} elsif ( @$src_aref[1] eq "SIGNED") { |
||||
print $fh " ASSIGN_TO_SAME_SIZE_SIGNED_TO_UNSIGNED(dst, dsttype, src, srctype)\n"; |
||||
} else { |
||||
print $fh " ASSIGN_TO_SAME_SIZE_UNSIGNED_TO_SIGNED(dst, dsttype, src, srctype)\n"; |
||||
} |
||||
print $fh "#endif /* src: @$src_aref[0] dst: @$dst_aref[0] */\n\n"; |
||||
} |
||||
} |
||||
} |
||||
|
||||
} |
||||
|
||||
############################################################################## |
||||
# Print end of ifdef's to prevent a file from being re-included |
||||
# |
||||
sub print_endprotect ($$) { |
||||
my ($fh, $file) = @_; |
||||
|
||||
# Clip off the ".h" part of the name |
||||
$file =~ s/(\w*)\.h/$1/; |
||||
|
||||
# Print the endif info |
||||
print $fh "#endif /* ${file}_H */\n\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Create the generated portion of the public header file |
||||
# |
||||
sub create_public ($) { |
||||
my $prefix = shift; # Get the prefix for the generated file |
||||
my $file = "H5overflow.h"; # Name of file to generate |
||||
my $name; # Name of function |
||||
|
||||
# Rename previous file |
||||
# rename "${prefix}${file}", "${prefix}${file}~" or die "unable to make backup"; |
||||
|
||||
# Open new header file |
||||
open HEADER, ">${prefix}${file}" or die "unable to modify source"; |
||||
|
||||
# Create file contents |
||||
print_copyright(*HEADER); |
||||
print_warning(*HEADER); |
||||
print_startprotect(*HEADER, $file); |
||||
print_typemacros(*HEADER); |
||||
print_endprotect(*HEADER, $file); |
||||
|
||||
# Close header file |
||||
close HEADER; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Read symbol version file (given as command-line argument) in and process it |
||||
# into internal data structures, then create header files. |
||||
# |
||||
my $file; # Filename of input file |
||||
|
||||
for $file (@ARGV) { |
||||
my $prefix; # Local prefix for generated files |
||||
my $line; # Line from input file |
||||
|
||||
#print "file = '$file'\n"; |
||||
($prefix) = ($file =~ /(^.*\/)/); |
||||
#print "prefix = '$prefix'\n"; |
||||
# Read in the entire file |
||||
open SOURCE, $file or die "$file: $!\n"; |
||||
while ( defined ($line=<SOURCE>) ) { |
||||
# Skip blank lines and those lines whose first character is a '#' |
||||
if(!($line =~ /(^\s*#.*$)|(^\s*$)/)) { |
||||
# Construct data structures for later printing |
||||
parse_line($line); |
||||
} |
||||
} |
||||
close SOURCE; |
||||
|
||||
# Create header files |
||||
print "Generating 'H5overflow.h'\n"; |
||||
create_public($prefix); |
||||
} |
||||
|
||||
@ -0,0 +1,530 @@ |
||||
#!/usr/bin/env perl |
||||
require 5.003; |
||||
use warnings; |
||||
|
||||
# Global settings |
||||
# (The max_idx parameter is the only thing that needs to be changed when adding |
||||
# support for a new major release. If support for a prior major release |
||||
# is added (like support for 1.4, etc), the min_sup_idx parameter will |
||||
# need to be decremented.) |
||||
|
||||
# Max. library "index" (0 = v1.0, 1 = 1.2, 2 = 1.4, 3 = 1.6, 4 = 1.8, 5 = 1.10, 6 = 1.12, 7 = 1.14, etc) |
||||
$max_idx = 7; |
||||
|
||||
# Min. supported previous library version "index" (0 = v1.0, 1 = 1.2, etc) |
||||
$min_sup_idx = 3; |
||||
|
||||
# Number of spaces to indent preprocessor commands inside ifdefs |
||||
$indent = 2; |
||||
|
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# Create public symbol version headers |
||||
# |
||||
# Read in the public symbol version description text file and create the |
||||
# appropriate headers needed by the library. |
||||
# |
||||
# Programmer: Quincey Koziol |
||||
# Creation Date: 2007/07/10 |
||||
|
||||
############################################################################## |
||||
# Print the copyright into an open file |
||||
# |
||||
sub print_copyright ($) { |
||||
my $fh = shift; |
||||
|
||||
print $fh "/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *\n"; |
||||
print $fh " * Copyright by The HDF Group. *\n"; |
||||
print $fh " * All rights reserved. *\n"; |
||||
print $fh " * *\n"; |
||||
print $fh " * This file is part of HDF5. The full HDF5 copyright notice, including *\n"; |
||||
print $fh " * terms governing use, modification, and redistribution, is contained in *\n"; |
||||
print $fh " * the COPYING file, which can be found at the root of the source code *\n"; |
||||
print $fh " * distribution tree, or in https://www.hdfgroup.org/licenses. *\n"; |
||||
print $fh " * If you do not have access to either file, you may request a copy from *\n"; |
||||
print $fh " * help\@hdfgroup.org. *\n"; |
||||
print $fh " * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print the "do not change this file" warning |
||||
# |
||||
sub print_warning ($) { |
||||
my $fh = shift; |
||||
|
||||
print $fh "\n/* Generated automatically by bin/make_vers -- do not edit */\n"; |
||||
print $fh "/* Add new versioned symbols to H5vers.txt file */\n\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print start of ifdef's to prevent a file from being re-included |
||||
# |
||||
sub print_startprotect ($$) { |
||||
my ($fh, $file) = @_; |
||||
|
||||
# Clip off the ".h" part of the name |
||||
$file =~ s/(\w*)\.h/$1/; |
||||
|
||||
# Print the ifdef info |
||||
print $fh "\n#ifndef ${file}_H\n"; |
||||
print $fh "#define ${file}_H\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print check for conflicting version macro settings |
||||
# |
||||
sub print_checkoptions ($) { |
||||
my $fh = shift; # File handle for output file |
||||
my $curr_idx; # Current API version index |
||||
|
||||
# Print the option checking |
||||
print $fh "\n\n/* Issue error if contradicting macros have been defined. */\n"; |
||||
print $fh "/* (Can't use an older (deprecated) API version if deprecated symbols have been disabled) */\n"; |
||||
|
||||
# Print the #ifdef |
||||
print $fh "#if ("; |
||||
for $curr_idx ($min_sup_idx .. ($max_idx - 1)) { |
||||
print $fh "defined(H5_USE_1", ($curr_idx * 2), "_API)"; |
||||
if($curr_idx < ($max_idx - 1)) { |
||||
print $fh " || "; |
||||
} |
||||
} |
||||
print $fh ") && defined(H5_NO_DEPRECATED_SYMBOLS)\n"; |
||||
|
||||
# Print the error for bad API version chosen |
||||
print $fh ' ' x $indent, "#error \"Can't choose old API versions when deprecated APIs are disabled\"\n"; |
||||
|
||||
# Print the #endif |
||||
print $fh "#endif /* ("; |
||||
for $curr_idx ($min_sup_idx .. ($max_idx - 1)) { |
||||
print $fh "defined(H5_USE_1", ($curr_idx * 2), "_API)"; |
||||
if($curr_idx < ($max_idx - 1)) { |
||||
print $fh " || "; |
||||
} |
||||
} |
||||
print $fh ") && defined(H5_NO_DEPRECATED_SYMBOLS) */\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print "global" API version macro settings |
||||
# |
||||
sub print_globalapidefvers ($) { |
||||
my $fh = shift; # File handle for output file |
||||
my $curr_idx; # Current API version index |
||||
|
||||
# Print the descriptive comment |
||||
print $fh "\n\n/* If a particular default \"global\" version of the library's interfaces is\n"; |
||||
print $fh " * chosen, set the corresponding version macro for API symbols.\n"; |
||||
print $fh " *\n"; |
||||
print $fh " */\n"; |
||||
|
||||
for $curr_idx ($min_sup_idx .. ($max_idx - 1)) { |
||||
# Print API version ifdef |
||||
print $fh "\n#if defined(H5_USE_1", ($curr_idx * 2), "_API_DEFAULT) && !defined(H5_USE_1", ($curr_idx * 2), "_API)\n"; |
||||
# Print API version definition |
||||
print $fh " " x $indent, "#define H5_USE_1", ($curr_idx * 2), "_API 1\n"; |
||||
# Print API version endif |
||||
print $fh "#endif /* H5_USE_1", ($curr_idx * 2), "_API_DEFAULT && !H5_USE_1", ($curr_idx * 2), "_API */\n"; |
||||
} |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print "global" API symbol version macro settings |
||||
# |
||||
sub print_globalapisymbolvers ($) { |
||||
my $fh = shift; # File handle for output file |
||||
my $curr_idx; # Current API version index |
||||
|
||||
# Print the descriptive comment |
||||
print $fh "\n\n/* If a particular \"global\" version of the library's interfaces is chosen,\n"; |
||||
print $fh " * set the versions for the API symbols affected.\n"; |
||||
print $fh " *\n"; |
||||
print $fh " * Note: If an application has already chosen a particular version for an\n"; |
||||
print $fh " * API symbol, the individual API version macro takes priority.\n"; |
||||
print $fh " */\n"; |
||||
|
||||
# Loop over supported older library APIs and define the appropriate macros |
||||
for $curr_idx ($min_sup_idx .. ($max_idx - 1)) { |
||||
# Print API version ifdef |
||||
print $fh "\n#ifdef H5_USE_1", ($curr_idx * 2), "_API\n"; |
||||
|
||||
# Print the version macro info for each function that is defined for |
||||
# this API version |
||||
print $fh "\n/*************/\n"; |
||||
print $fh "/* Functions */\n"; |
||||
print $fh "/*************/\n"; |
||||
for $name (sort keys %{$func_vers[$curr_idx]}) { |
||||
print $fh "\n#if !defined(", $name, "_vers)\n"; |
||||
print $fh " " x $indent, "#define ", $name, "_vers $func_vers[$curr_idx]{$name}\n"; |
||||
print $fh "#endif /* !defined(", $name, "_vers) */\n"; |
||||
} |
||||
|
||||
# Print the version macro info for each typedef that is defined for |
||||
# this API version |
||||
print $fh "\n/************/\n"; |
||||
print $fh "/* Typedefs */\n"; |
||||
print $fh "/************/\n"; |
||||
for $name (sort keys %{$type_vers[$curr_idx]}) { |
||||
print $fh "\n#if !defined(", $name, "_t_vers)\n"; |
||||
print $fh " " x $indent, "#define ", $name, "_t_vers $type_vers[$curr_idx]{$name}\n"; |
||||
print $fh "#endif /* !defined(", $name, "_t_vers) */\n"; |
||||
} |
||||
|
||||
# Print API version endif |
||||
print $fh "\n#endif /* H5_USE_1", ($curr_idx * 2), "_API */\n"; |
||||
} |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print "default" API version macro settings |
||||
# |
||||
sub print_defaultapivers ($) { |
||||
my $fh = shift; # File handle for output file |
||||
my $curr_name; # Current API function |
||||
|
||||
# Print the descriptive comment |
||||
print $fh "\n\n/* Choose the correct version of each API symbol, defaulting to the latest\n"; |
||||
print $fh " * version of each. The \"best\" name for API parameters/data structures\n"; |
||||
print $fh " * that have changed definitions is also set. An error is issued for\n"; |
||||
print $fh " * specifying an invalid API version.\n"; |
||||
print $fh " */\n"; |
||||
|
||||
# Loop over function names that are versioned and set up the version macros |
||||
print $fh "\n/*************/\n"; |
||||
print $fh "/* Functions */\n"; |
||||
print $fh "/*************/\n"; |
||||
for $curr_name (sort keys %functions) { |
||||
my $curr_vers_name; # Name of version macro for current function |
||||
my $curr_vers; # Version of function |
||||
my @param_list; # Typedefs for the function parameters |
||||
|
||||
# Set up variables for later use |
||||
$curr_vers_name = $curr_name . "_vers"; |
||||
$curr_vers = $functions{$curr_name}; |
||||
|
||||
# Split up parameter info |
||||
@param_list = split(/\s*,\s*/, $func_params{$curr_name}); |
||||
#print "print_defaultapivers: param_list=(@param_list)\n"; |
||||
|
||||
# Set up default/latest version name mapping |
||||
print $fh "\n#if !defined($curr_vers_name) || $curr_vers_name == $curr_vers\n"; |
||||
print $fh " " x $indent, "#ifndef $curr_vers_name\n"; |
||||
print $fh " " x ($indent * 2), "#define $curr_vers_name $curr_vers\n"; |
||||
print $fh " " x $indent, "#endif /* $curr_vers_name */\n"; |
||||
print $fh " " x $indent, "#define $curr_name $curr_name$curr_vers\n"; |
||||
|
||||
# Print function's dependent parameter types |
||||
foreach(sort(@param_list)) { |
||||
print $fh " " x $indent, "#define ${_}_t $_${curr_vers}_t\n"; |
||||
} |
||||
|
||||
# Loop to print earlier version name mappings |
||||
$curr_vers--; |
||||
while($curr_vers > 0) { |
||||
print $fh "#elif $curr_vers_name == $curr_vers\n"; |
||||
print $fh " " x $indent, "#define $curr_name $curr_name$curr_vers\n"; |
||||
|
||||
# Print function's dependent parameter types |
||||
foreach(sort(@param_list)) { |
||||
print $fh " " x $indent, "#define ${_}_t $_${curr_vers}_t\n"; |
||||
} |
||||
|
||||
$curr_vers--; |
||||
} |
||||
|
||||
# Finish up with error for unknown version and endif |
||||
print $fh "#else /* $curr_vers_name */\n"; |
||||
print $fh " " x $indent, "#error \"$curr_vers_name set to invalid value\"\n"; |
||||
print $fh "#endif /* $curr_vers_name */\n"; |
||||
} |
||||
|
||||
# Loop over typedefs that are versioned and set up the version macros |
||||
print $fh "\n/************/\n"; |
||||
print $fh "/* Typedefs */\n"; |
||||
print $fh "/************/\n"; |
||||
for $curr_name (sort keys %typedefs) { |
||||
my $curr_vers_name; # Name of version macro for current function |
||||
my $curr_vers; # Version of function |
||||
|
||||
# Set up variables for later use |
||||
$curr_vers_name = $curr_name . "_t_vers"; |
||||
$curr_vers = $typedefs{$curr_name}; |
||||
|
||||
# Set up default/latest version name mapping |
||||
print $fh "\n#if !defined($curr_vers_name) || $curr_vers_name == $curr_vers\n"; |
||||
print $fh " " x $indent, "#ifndef $curr_vers_name\n"; |
||||
print $fh " " x ($indent * 2), "#define $curr_vers_name $curr_vers\n"; |
||||
print $fh " " x $indent, "#endif /* $curr_vers_name */\n"; |
||||
print $fh " " x $indent, "#define ${curr_name}_t $curr_name${curr_vers}_t\n"; |
||||
|
||||
# Loop to print earlier version name mappings |
||||
$curr_vers--; |
||||
while($curr_vers > 0) { |
||||
print $fh "#elif $curr_vers_name == $curr_vers\n"; |
||||
print $fh " " x $indent, "#define ${curr_name}_t $curr_name${curr_vers}_t\n"; |
||||
$curr_vers--; |
||||
} |
||||
|
||||
# Finish up with error for unknown version and endif |
||||
print $fh "#else /* $curr_vers_name */\n"; |
||||
print $fh " " x $indent, "#error \"$curr_vers_name set to invalid value\"\n"; |
||||
print $fh "#endif /* $curr_vers_name */\n\n"; |
||||
} |
||||
} |
||||
|
||||
############################################################################## |
||||
# Print end of ifdef's to prevent a file from being re-included |
||||
# |
||||
sub print_endprotect ($$) { |
||||
my ($fh, $file) = @_; |
||||
|
||||
# Clip off the ".h" part of the name |
||||
$file =~ s/(\w*)\.h/$1/; |
||||
|
||||
# Print the endif info |
||||
print $fh "#endif /* ${file}_H */\n\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Parse a meaningful line (not a comment or blank line) into the appropriate |
||||
# data structure |
||||
# |
||||
sub parse_line ($) { |
||||
my $line = shift; # Get the line to parse |
||||
|
||||
# Parse API function lines |
||||
#print "line=$line\n"; |
||||
if($line =~ /^\s*FUNCTION:/ || $line =~ /^\s*TYPEDEF:/) { |
||||
my $name; # The name of the function |
||||
my $params; # Typedefs for function parameters |
||||
my $vers; # The version info for the function |
||||
my @vers_list; # Version info, as a list |
||||
my @vers_nums; # Version info, as a numeric list |
||||
my $num_versions; # Number of versions for function |
||||
my %sym_versions; # Versions for a symbol |
||||
my $last_idx; # The previous version index seen for a function |
||||
my $last_vers; # The previous version # seen for a function |
||||
my $line_type; # Type of line we are parsing |
||||
|
||||
# Determine the type of the line to parse |
||||
if($line =~ /^\s*FUNCTION:/) { |
||||
$line_type = 1; |
||||
# Get the function's name & version info |
||||
($name, $params, $vers) = ($line =~ /^\s*FUNCTION:\s*(\w*);\s*(.*?)\s*;\s*(.*?)\s*$/); |
||||
#print "parse_line: name='$name', params='$params', vers='$vers'\n"; |
||||
} |
||||
elsif($line =~ /^\s*TYPEDEF:/) { |
||||
$line_type = 2; |
||||
|
||||
# Get the typedefs's name & version info |
||||
($name, $vers) = ($line =~ /^\s*TYPEDEF:\s*(\w*);\s*(.*?)\s*$/); |
||||
#print "parse_line: name='$name', vers='$vers'\n"; |
||||
} |
||||
#print "parse_line: line_type='$line_type'\n"; |
||||
|
||||
|
||||
# Check if the name already exists in the list of symbols |
||||
if(exists($functions{$name}) || exists($typedefs{$name})) { |
||||
die "duplicated symbol: $name"; |
||||
} |
||||
|
||||
# Check for no version info given |
||||
if($vers eq "") { |
||||
die "no version information: $name"; |
||||
} |
||||
|
||||
# Split up version info |
||||
@vers_list = split(/\s*,\s*/, $vers); |
||||
#print "parse_line: vers_list=(@vers_list)\n"; |
||||
|
||||
# Parse the version list into numbers, checking for invalid input |
||||
foreach(@vers_list) { |
||||
my $vers_idx; # Index of version in array |
||||
|
||||
# Do some validation on the input |
||||
# Note: v111 is allowed because H5O functions were prematurely versioned |
||||
# in HDF5 1.10. Because users were affected by this, the versioning |
||||
# was rescinded but the H5O version 2 functions were kept to be |
||||
# called directly. Now that the version macros are added in 1.12, |
||||
# along with a 3rd version of the H5O functions, the H5O function |
||||
# version for default api=v110 should be version 1 to work correctly |
||||
# with 1.10 applications that were using unversioned H5O functions, |
||||
# and the H5O function version should be version 3 for default api=v112 |
||||
# (the default api version for 1.12). Allowing a v111 entry and |
||||
# incrementing its index 13 lines below allows a version 2 that is |
||||
# never accessed via the H5O function macros. |
||||
if(!( $_ =~ /v1[02468]/ || $_ =~ /v11[02468]/ || $_ =~ /v111/ )) { |
||||
die "bad version information: $name"; |
||||
} |
||||
if(exists($sym_versions{$_})) { |
||||
die "duplicate version information: $name"; |
||||
} |
||||
|
||||
# Store the versions for the function in a local hash table, indexed by the version |
||||
$sym_versions{$_}=$_; |
||||
|
||||
#print "parse_line: _=$_\n"; |
||||
# Get the index of the version |
||||
($vers_idx) = ($_ =~ /v1(\d+)/); |
||||
if($vers_idx == 11) { |
||||
$vers_idx++; |
||||
} |
||||
$vers_idx /= 2; |
||||
#print "parse_line: vers_idx='$vers_idx'\n"; |
||||
push(@vers_nums, $vers_idx); |
||||
} |
||||
#print "parse_line: vers_nums=(@vers_nums)\n"; |
||||
|
||||
# Check for invalid version info given |
||||
$last_idx = -1; |
||||
$last_vers = 1; |
||||
foreach(sort(@vers_nums)) { |
||||
#print "parse_line: _=$_ last_idx='$last_idx'\n"; |
||||
# Update intermediate versions of the library that included the API routine |
||||
if($last_idx >= 0) { |
||||
#print "parse_line: name='$name'\n"; |
||||
#print "parse_line: last_vers='$last_vers'\n"; |
||||
#print "parse_line: last_idx='$last_idx'\n"; |
||||
|
||||
# Add the function to the list of API routines available in |
||||
# different versions of the library |
||||
while($last_idx <= $_) { |
||||
if($line_type == 1) { |
||||
$func_vers[$last_idx]{$name} = $last_vers; |
||||
} elsif($line_type == 2) { |
||||
$type_vers[$last_idx]{$name} = $last_vers; |
||||
} else { |
||||
die "unknown line type: $line"; |
||||
} |
||||
$last_idx++; |
||||
} |
||||
|
||||
# Increment the version # of the function |
||||
$last_vers++; |
||||
} |
||||
|
||||
# Keep track of last version index seen |
||||
$last_idx = $_; |
||||
} |
||||
|
||||
# Finish updating versions of the library that included the API routine |
||||
if($last_idx >= 0) { |
||||
#print "parse_line: max_idx='$max_idx'\n"; |
||||
|
||||
# Add the function to the list of API routines available in |
||||
# different versions of the library |
||||
while($last_idx <= $max_idx) { |
||||
if($line_type == 1) { |
||||
$func_vers[$last_idx]{$name} = $last_vers; |
||||
} elsif($line_type == 2) { |
||||
$type_vers[$last_idx]{$name} = $last_vers; |
||||
} else { |
||||
die "unknown line type: $line"; |
||||
} |
||||
$last_idx++; |
||||
} |
||||
} |
||||
|
||||
# Store the number of symbol versions in a hash table, indexed by the name |
||||
if($line_type == 1) { |
||||
$functions{$name} = $#vers_list + 1; |
||||
|
||||
# Store the function's parameter types for later |
||||
$func_params{$name} = $params; |
||||
} elsif($line_type == 2) { |
||||
$typedefs{$name} = $#vers_list + 1; |
||||
} else { |
||||
die "unknown line type: $line"; |
||||
} |
||||
} |
||||
# Unknown keyword |
||||
else { |
||||
die "unknown keyword: $line"; |
||||
} |
||||
} |
||||
|
||||
############################################################################## |
||||
# Create the generated portion of the public header file |
||||
# |
||||
sub create_public ($) { |
||||
my $prefix = shift; # Get the prefix for the generated file |
||||
my $file = "H5version.h"; # Name of file to generate |
||||
my $name; # Name of function |
||||
|
||||
# Rename previous file |
||||
# rename "${prefix}${file}", "${prefix}${file}~" or die "unable to make backup"; |
||||
|
||||
# Open new header file |
||||
open HEADER, ">${prefix}${file}" or die "unable to modify source"; |
||||
|
||||
# Create file contents |
||||
print_copyright(*HEADER); |
||||
print_warning(*HEADER); |
||||
print_startprotect(*HEADER, $file); |
||||
print_globalapidefvers(*HEADER); |
||||
print_checkoptions(*HEADER); |
||||
print_globalapisymbolvers(*HEADER); |
||||
print_defaultapivers(*HEADER); |
||||
print_endprotect(*HEADER, $file); |
||||
|
||||
# Close header file |
||||
close HEADER; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Read symbol version file (given as command-line argument) in and process it |
||||
# into internal data structures, then create header files. |
||||
# |
||||
for $file (@ARGV) { |
||||
my $prefix; # Local prefix for generated files |
||||
|
||||
#print "file = '$file'\n"; |
||||
# Check for directory prefix on input file |
||||
if($file =~ /\//) { |
||||
($prefix) = ($file =~ /(^.*\/)/); |
||||
} |
||||
else { |
||||
$prefix = ""; |
||||
} |
||||
#print "prefix = '$prefix'\n"; |
||||
# Read in the entire file |
||||
open SOURCE, $file or die "$file: $!\n"; |
||||
while ( defined ($line=<SOURCE>) ) { |
||||
# Skip blank lines and those lines whose first character is a '#' |
||||
if(!($line =~ /(^\s*#.*$)|(^\s*$)/)) { |
||||
# Construct data structures for later printing |
||||
parse_line($line); |
||||
} |
||||
} |
||||
close SOURCE; |
||||
|
||||
# Create header files |
||||
print "Generating '", $prefix, "H5version.h'\n"; |
||||
create_public($prefix); |
||||
|
||||
#for $name (sort keys %functions) { |
||||
# print "functions{$name} = $functions{$name}\n"; |
||||
#} |
||||
|
||||
#for $i (0 .. $#func_vers) { |
||||
# my $vers_name; # Name of indexed version |
||||
# $vers_name = "v1." . ($i * 2); |
||||
# print "$vers_name functions: "; |
||||
# for $name (sort keys %{$func_vers[$i]}) { |
||||
# print "$name$func_vers[$i]{$name} "; |
||||
# } |
||||
# print "\n"; |
||||
#} |
||||
|
||||
} |
||||
|
||||
@ -0,0 +1,66 @@ |
||||
cat << EOF |
||||
Help for HDF5 Makefiles |
||||
For help with the make utility itself, try 'man make'. |
||||
|
||||
HDF5 makefiles are used to build, test, and install HDF5. The exact |
||||
behavior and output will depend on your system's version of make, compiler, |
||||
etc. |
||||
|
||||
Usage: make [make options] [TARGET] |
||||
|
||||
Targets: |
||||
make help: print this help message |
||||
|
||||
make, make all: (default if no target is specified) |
||||
builds all libraries, tools, and tests |
||||
make lib: builds libraries only |
||||
make progs: builds libraries and programs |
||||
make tests: builds libraries, programs, and tests. |
||||
Essentially the same as 'make all'. |
||||
make check, make tests, |
||||
make _test, make test: Run HDF5's test suite. |
||||
Make will exit with a failure if any tests fail. |
||||
|
||||
make install: install HDF5 libraries, include files, and tools |
||||
make install-examples: installs example source files |
||||
make install-all: runs both make-install and make install-examples |
||||
make check-install: test building examples with installed HDF5 library |
||||
make uninstall: remove installed files |
||||
make install-examples: removes example source files |
||||
make uninstall-all: removes both installed libraries and examples |
||||
|
||||
make check-clean: remove files generated by running tests |
||||
(allows tests to be re-run) |
||||
make mostlyclean: remove intermediate files (*.o files). |
||||
Doesn't clean libraries or executables. |
||||
make clean: remove all files generated by make or make check |
||||
make distclean: remove all files generated by make, make check, or |
||||
configure |
||||
|
||||
make check-p: Only run parallel tests |
||||
make check-s: Only run serial tests |
||||
make check-vfd: Run tests with each virtual file driver |
||||
make check-vol: Run tests with each virtual object layer connector |
||||
|
||||
HDF5 uses Automake, so any standard Automake targets not listed here |
||||
should also work. |
||||
|
||||
Configure options that affect Makefile behavior: |
||||
--enable-fortran, --enable-cxx, --enable-parallel, and --disable-hl |
||||
enable or disable various interfaces. Make will only recurse into these |
||||
directories if they are specified at configure time. |
||||
--prefix=[path], --libdir=[path], --includedir=[path], etc. can be used |
||||
to change the directory into which make install puts files. |
||||
--enable-build-all causes make to build some files that are only |
||||
needed by developers (test file generation programs). |
||||
|
||||
Environment variables that affect Makefile behavior: |
||||
Make will honor environment variables like CFLAGS that are used when building and linking. |
||||
The variable HDF5TestExpress can be used to control the running time |
||||
of the tests. HDF5TestExpress = 0 is a full run of the tests while |
||||
to run make check. 1 and 2 are intermediate values. The default value is 1. |
||||
|
||||
Available command-line options for make depend on the version of make installed |
||||
on your system. Try 'man make'. |
||||
|
||||
EOF |
||||
@ -0,0 +1,215 @@ |
||||
#! /bin/sh |
||||
# Common wrapper for a few potentially missing GNU programs. |
||||
|
||||
scriptversion=2018-03-07.03; # UTC |
||||
|
||||
# Copyright (C) 1996-2020 Free Software Foundation, Inc. |
||||
# Originally written by Fran,cois Pinard <pinard@iro.umontreal.ca>, 1996. |
||||
|
||||
# This program is free software; you can redistribute it and/or modify |
||||
# it under the terms of the GNU General Public License as published by |
||||
# the Free Software Foundation; either version 2, or (at your option) |
||||
# any later version. |
||||
|
||||
# This program is distributed in the hope that it will be useful, |
||||
# but WITHOUT ANY WARRANTY; without even the implied warranty of |
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
||||
# GNU General Public License for more details. |
||||
|
||||
# You should have received a copy of the GNU General Public License |
||||
# along with this program. If not, see <https://www.gnu.org/licenses/>. |
||||
|
||||
# As a special exception to the GNU General Public License, if you |
||||
# distribute this file as part of a program that contains a |
||||
# configuration script generated by Autoconf, you may include it under |
||||
# the same distribution terms that you use for the rest of that program. |
||||
|
||||
if test $# -eq 0; then |
||||
echo 1>&2 "Try '$0 --help' for more information" |
||||
exit 1 |
||||
fi |
||||
|
||||
case $1 in |
||||
|
||||
--is-lightweight) |
||||
# Used by our autoconf macros to check whether the available missing |
||||
# script is modern enough. |
||||
exit 0 |
||||
;; |
||||
|
||||
--run) |
||||
# Back-compat with the calling convention used by older automake. |
||||
shift |
||||
;; |
||||
|
||||
-h|--h|--he|--hel|--help) |
||||
echo "\ |
||||
$0 [OPTION]... PROGRAM [ARGUMENT]... |
||||
|
||||
Run 'PROGRAM [ARGUMENT]...', returning a proper advice when this fails due |
||||
to PROGRAM being missing or too old. |
||||
|
||||
Options: |
||||
-h, --help display this help and exit |
||||
-v, --version output version information and exit |
||||
|
||||
Supported PROGRAM values: |
||||
aclocal autoconf autoheader autom4te automake makeinfo |
||||
bison yacc flex lex help2man |
||||
|
||||
Version suffixes to PROGRAM as well as the prefixes 'gnu-', 'gnu', and |
||||
'g' are ignored when checking the name. |
||||
|
||||
Send bug reports to <bug-automake@gnu.org>." |
||||
exit $? |
||||
;; |
||||
|
||||
-v|--v|--ve|--ver|--vers|--versi|--versio|--version) |
||||
echo "missing $scriptversion (GNU Automake)" |
||||
exit $? |
||||
;; |
||||
|
||||
-*) |
||||
echo 1>&2 "$0: unknown '$1' option" |
||||
echo 1>&2 "Try '$0 --help' for more information" |
||||
exit 1 |
||||
;; |
||||
|
||||
esac |
||||
|
||||
# Run the given program, remember its exit status. |
||||
"$@"; st=$? |
||||
|
||||
# If it succeeded, we are done. |
||||
test $st -eq 0 && exit 0 |
||||
|
||||
# Also exit now if we it failed (or wasn't found), and '--version' was |
||||
# passed; such an option is passed most likely to detect whether the |
||||
# program is present and works. |
||||
case $2 in --version|--help) exit $st;; esac |
||||
|
||||
# Exit code 63 means version mismatch. This often happens when the user |
||||
# tries to use an ancient version of a tool on a file that requires a |
||||
# minimum version. |
||||
if test $st -eq 63; then |
||||
msg="probably too old" |
||||
elif test $st -eq 127; then |
||||
# Program was missing. |
||||
msg="missing on your system" |
||||
else |
||||
# Program was found and executed, but failed. Give up. |
||||
exit $st |
||||
fi |
||||
|
||||
perl_URL=https://www.perl.org/ |
||||
flex_URL=https://github.com/westes/flex |
||||
gnu_software_URL=https://www.gnu.org/software |
||||
|
||||
program_details () |
||||
{ |
||||
case $1 in |
||||
aclocal|automake) |
||||
echo "The '$1' program is part of the GNU Automake package:" |
||||
echo "<$gnu_software_URL/automake>" |
||||
echo "It also requires GNU Autoconf, GNU m4 and Perl in order to run:" |
||||
echo "<$gnu_software_URL/autoconf>" |
||||
echo "<$gnu_software_URL/m4/>" |
||||
echo "<$perl_URL>" |
||||
;; |
||||
autoconf|autom4te|autoheader) |
||||
echo "The '$1' program is part of the GNU Autoconf package:" |
||||
echo "<$gnu_software_URL/autoconf/>" |
||||
echo "It also requires GNU m4 and Perl in order to run:" |
||||
echo "<$gnu_software_URL/m4/>" |
||||
echo "<$perl_URL>" |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
give_advice () |
||||
{ |
||||
# Normalize program name to check for. |
||||
normalized_program=`echo "$1" | sed ' |
||||
s/^gnu-//; t |
||||
s/^gnu//; t |
||||
s/^g//; t'` |
||||
|
||||
printf '%s\n' "'$1' is $msg." |
||||
|
||||
configure_deps="'configure.ac' or m4 files included by 'configure.ac'" |
||||
case $normalized_program in |
||||
autoconf*) |
||||
echo "You should only need it if you modified 'configure.ac'," |
||||
echo "or m4 files included by it." |
||||
program_details 'autoconf' |
||||
;; |
||||
autoheader*) |
||||
echo "You should only need it if you modified 'acconfig.h' or" |
||||
echo "$configure_deps." |
||||
program_details 'autoheader' |
||||
;; |
||||
automake*) |
||||
echo "You should only need it if you modified 'Makefile.am' or" |
||||
echo "$configure_deps." |
||||
program_details 'automake' |
||||
;; |
||||
aclocal*) |
||||
echo "You should only need it if you modified 'acinclude.m4' or" |
||||
echo "$configure_deps." |
||||
program_details 'aclocal' |
||||
;; |
||||
autom4te*) |
||||
echo "You might have modified some maintainer files that require" |
||||
echo "the 'autom4te' program to be rebuilt." |
||||
program_details 'autom4te' |
||||
;; |
||||
bison*|yacc*) |
||||
echo "You should only need it if you modified a '.y' file." |
||||
echo "You may want to install the GNU Bison package:" |
||||
echo "<$gnu_software_URL/bison/>" |
||||
;; |
||||
lex*|flex*) |
||||
echo "You should only need it if you modified a '.l' file." |
||||
echo "You may want to install the Fast Lexical Analyzer package:" |
||||
echo "<$flex_URL>" |
||||
;; |
||||
help2man*) |
||||
echo "You should only need it if you modified a dependency" \ |
||||
"of a man page." |
||||
echo "You may want to install the GNU Help2man package:" |
||||
echo "<$gnu_software_URL/help2man/>" |
||||
;; |
||||
makeinfo*) |
||||
echo "You should only need it if you modified a '.texi' file, or" |
||||
echo "any other file indirectly affecting the aspect of the manual." |
||||
echo "You might want to install the Texinfo package:" |
||||
echo "<$gnu_software_URL/texinfo/>" |
||||
echo "The spurious makeinfo call might also be the consequence of" |
||||
echo "using a buggy 'make' (AIX, DU, IRIX), in which case you might" |
||||
echo "want to install GNU make:" |
||||
echo "<$gnu_software_URL/make/>" |
||||
;; |
||||
*) |
||||
echo "You might have modified some files without having the proper" |
||||
echo "tools for further handling them. Check the 'README' file, it" |
||||
echo "often tells you about the needed prerequisites for installing" |
||||
echo "this package. You may also peek at any GNU archive site, in" |
||||
echo "case some other package contains this missing '$1' program." |
||||
;; |
||||
esac |
||||
} |
||||
|
||||
give_advice "$1" | sed -e '1s/^/WARNING: /' \ |
||||
-e '2,$s/^/ /' >&2 |
||||
|
||||
# Propagate the correct exit status (expected to be 127 for a program |
||||
# not found, 63 for a program that failed due to version mismatch). |
||||
exit $st |
||||
|
||||
# Local variables: |
||||
# eval: (add-hook 'before-save-hook 'time-stamp) |
||||
# time-stamp-start: "scriptversion=" |
||||
# time-stamp-format: "%:y-%02m-%02d.%02H" |
||||
# time-stamp-time-zone: "UTC0" |
||||
# time-stamp-end: "; # UTC" |
||||
# End: |
||||
@ -0,0 +1,103 @@ |
||||
## Copyright by The HDF Group. |
||||
## All rights reserved. |
||||
## |
||||
## This file is part of HDF5. The full HDF5 copyright notice, including |
||||
## terms governing use, modification, and redistribution, is contained in |
||||
## the COPYING file, which can be found at the root of the source code |
||||
## distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
## If you do not have access to either file, you may request a copy from |
||||
## help@hdfgroup.org. |
||||
|
||||
# This contains function definitions of output filtering. |
||||
# This file should only be sourced in by another shell script. |
||||
# |
||||
# Programmer: Albert Cheng |
||||
# Created Date: 2011/5/3 |
||||
|
||||
|
||||
# Comment added to address HDFFV-8270: |
||||
# As I understand it, the purpose of this file is to remove extraneous messages |
||||
# that appear in stdout and stderr on some machines that have been tested outside |
||||
# of the HDF Group realm. The purpose of this script is to filter those |
||||
# extraneous messages from stdout and stderr so that when the output files are |
||||
# compared to the expected output, the extra messages will not cause failures in |
||||
# the tests. The system messages in the comments below are out of date, meaning |
||||
# I suppose that while the script code to filter messages on the system was |
||||
# correct correct when last used, the output in the comments doesn't match the |
||||
# script code that follows. I don't currently have access to any of these |
||||
# systems to see the current output and the effect of the script code. If using |
||||
# this file in the future, please update the comments to match the scripts in use. |
||||
# Larry Knox 2017/3/15 |
||||
|
||||
|
||||
# Some systems will dump some messages to stdout for various reasons. |
||||
# Remove them from the stdout result file. |
||||
# $1 is the file name of the file to be filtered. |
||||
# Cases of filter needed: |
||||
# 1. Sandia Red-Storm |
||||
# yod always prints these two lines at the beginning. |
||||
# LibLustre: NAL NID: 0004a605 (5) |
||||
# Lustre: OBD class driver Build Version: 1, info@clusterfs.com |
||||
# 2. LANL Lambda |
||||
# mpijob mirun -np always add an extra line at the end like: |
||||
# P4 procgroup file is /users/acheng/.lsbatch/host10524.l82 |
||||
STDOUT_FILTER() { |
||||
result_file=$1 |
||||
tmp_file=/tmp/h5test_tmp_$$ |
||||
# Filter Sandia Red-Storm yod messages. |
||||
cp $result_file $tmp_file |
||||
sed -e '/^LibLustre:/d' -e '/^Lustre:/d' \ |
||||
< $tmp_file > $result_file |
||||
# Filter LANL Lambda mpirun message. |
||||
cp $result_file $tmp_file |
||||
sed -e '/^P4 procgroup file is/d' \ |
||||
< $tmp_file > $result_file |
||||
# cleanup |
||||
rm -f $tmp_file |
||||
} |
||||
|
||||
|
||||
# Some systems will dump some messages to stderr for various reasons. |
||||
# Remove them from the stderr result file. |
||||
# $1 is the file name of the file to be filtered. |
||||
# Cases of filter needed: |
||||
# * LANL MPI: |
||||
# The LANL MPI will print some messages like the following, |
||||
# LA-MPI: *** mpirun (1.5.10) |
||||
# LA-MPI: *** 3 process(es) on 2 host(s): 2*fln21 1*fln22 |
||||
# LA-MPI: *** libmpi (1.5.10) |
||||
# LA-MPI: *** Copyright 2001-2004, ACL, Los Alamos National Laboratory |
||||
# * h5diff debug output: |
||||
# Debug output all have prefix "h5diff debug: ". |
||||
# * AIX system prints messages like these when it is aborting: |
||||
# ERROR: 0031-300 Forcing all remote tasks to exit due to exit code 1 in task 0 |
||||
# ERROR: 0031-250 task 4: Terminated |
||||
# ERROR: 0031-250 task 3: Terminated |
||||
# ERROR: 0031-250 task 2: Terminated |
||||
# ERROR: 0031-250 task 1: Terminated |
||||
# * LLNL Blue-Gene mpirun prints messages like there when it exit non-zero: |
||||
# <Apr 12 15:01:49.075658> BE_MPI (ERROR): The error message in the job record is as follows: |
||||
# <Apr 12 15:01:49.075736> BE_MPI (ERROR): "killed by exit(1) on node 0" |
||||
STDERR_FILTER() { |
||||
result_file=$1 |
||||
tmp_file=/tmp/h5test_tmp_$$ |
||||
# Filter LLNL Blue-Gene error messages in both serial and parallel modes |
||||
# since mpirun is used in both modes. |
||||
cp $result_file $tmp_file |
||||
sed -e '/ BE_MPI (ERROR): /d' \ |
||||
< $tmp_file > $result_file |
||||
# Filter LANL MPI messages |
||||
# and LLNL srun messages |
||||
# and AIX error messages |
||||
if test -n "$pmode"; then |
||||
cp $result_file $tmp_file |
||||
sed -e '/^LA-MPI:/d' -e '/^srun:/d' -e '/^ERROR:/d' \ |
||||
< $tmp_file > $result_file |
||||
fi |
||||
# Filter h5diff debug output |
||||
cp $result_file $tmp_file |
||||
sed -e '/^h5diff debug: /d' \ |
||||
< $tmp_file > $result_file |
||||
# clean up temporary files. |
||||
rm -f $tmp_file |
||||
} |
||||
@ -0,0 +1,164 @@ |
||||
#! /bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
## Remove paths to libraries used to build HDF5 when packaging HDF5 |
||||
## binaries. |
||||
## For help page, use "h5rmflags -help" |
||||
|
||||
# Constants definitions |
||||
EXIT_SUCCESS=0 |
||||
EXIT_FAILURE=1 |
||||
|
||||
# Function definitions |
||||
|
||||
# show help page |
||||
usage() { |
||||
# A wonderfully informative "usage" message. |
||||
echo "usage: $prog_name [OPTIONS]" |
||||
echo " OPTIONS:" |
||||
echo " -help|help This help message" |
||||
echo " -echo Show all the shell commands executed" |
||||
echo " -force No prompt, just do it" |
||||
echo " -prefix=DIR New directory to find HDF5 lib/ and include/" |
||||
echo " subdirectories [default: current directory]" |
||||
echo " -tool=TOOL Tool to update. TOOL must be in the current" |
||||
echo " directory and writable. [default: $h5tools]" |
||||
echo " -show Show the commands without executing them" |
||||
echo " " |
||||
exit $EXIT_FAILURE |
||||
} |
||||
|
||||
# display variable values |
||||
dump_vars(){ |
||||
echo "====Showing all variable values=====" |
||||
echo prefix=$prefix |
||||
echo h5tools=$h5tools |
||||
echo "====End Showing=====" |
||||
} |
||||
|
||||
# show actions to be taken |
||||
show_action() |
||||
{ |
||||
echo "Update the following tools because they are now installed at a new directory" |
||||
for t in $foundtools; do |
||||
echo "${t}:" |
||||
echo " current setting=`sed -e '/^prefix=/s/prefix=//p' -e d $t`" |
||||
echo " new setting="\""$prefix"\" |
||||
done |
||||
} |
||||
|
||||
|
||||
# Report Error message |
||||
ERROR() |
||||
{ |
||||
echo "***ERROR***" |
||||
echo "$1" |
||||
} |
||||
|
||||
# Main |
||||
# |
||||
# Initialization |
||||
h5tools="h5cc h5pcc h5fc h5pfc h5c++" # possible hdf5 tools |
||||
foundtools= # tools found and will be modified |
||||
fmode= # force mode, default is off |
||||
prefix=`(cd ..;pwd)` |
||||
|
||||
# Parse options |
||||
for arg in $@ ; do |
||||
case "$arg" in |
||||
-prefix=*) |
||||
prefix="`expr "$arg" : '-prefix=\(.*\)'`" |
||||
;; |
||||
-echo) |
||||
set -x |
||||
;; |
||||
-show) |
||||
SHOW="echo" |
||||
;; |
||||
-tool=*) |
||||
h5tools="`expr "$arg" : '-tool=\(.*\)'`" |
||||
;; |
||||
-help|help) |
||||
usage |
||||
;; |
||||
-force) |
||||
fmode=yes |
||||
;; |
||||
*) |
||||
ERROR "Unknown Option($arg)" |
||||
usage |
||||
exit $EXIT_FAILURE |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# Sanity checks |
||||
#if [ ! -d $prefix ]; then |
||||
# ERROR "prefix($prefix) is not an existing directory" |
||||
# exit $EXIT_FAILURE |
||||
#fi |
||||
|
||||
for x in $h5tools; do |
||||
if [ -f $x ]; then |
||||
foundtools="$foundtools $x" |
||||
if [ ! -w $x ]; then |
||||
ERROR "h5tool($x) is not writable" |
||||
exit $EXIT_FAILURE |
||||
fi |
||||
fi |
||||
done |
||||
|
||||
if [ -z "$foundtools" ]; then |
||||
ERROR "found no tools to modify" |
||||
exit $EXIT_FAILURE |
||||
fi |
||||
|
||||
# Show actions to be taken and get consent |
||||
show_action |
||||
|
||||
|
||||
# Update them |
||||
if [ "$SHOW" = "echo" ]; then |
||||
echo "===Update commands are:====" |
||||
# cat $CMDFILE |
||||
echo "===End Update commands=====" |
||||
fi |
||||
|
||||
for t in $foundtools; do |
||||
echo Update $t ... |
||||
# COMMAND="ed - $t" |
||||
# if [ "$SHOW" = "echo" ]; then |
||||
# echo $COMMAND |
||||
# else |
||||
# $COMMAND < $CMDFILE |
||||
ed - $t << end |
||||
g/^H5BLD_CPPFLAGS/s/-I\/.*include //g |
||||
g/^H5BLD_LDFLAGS/s/-L\/.*lib //g |
||||
g/^H5BLD_LDFLAGS/s/-L\/.*lib64 //g |
||||
. |
||||
w |
||||
end |
||||
# fi |
||||
done |
||||
|
||||
|
||||
# Cleanup |
||||
#rm -f $CMDFILE |
||||
exit $EXIT_SUCCESS |
||||
|
||||
# Some possible future features to add |
||||
# CCBASE - Name of the alternative C compiler |
||||
# CLINKERBASE - Name of the alternative linker |
||||
# LDFLAGS - Path to different libraries your application will link with |
||||
# (this path should include the path to the zlib library) |
||||
# LIBS - Libraries your application will link with |
||||
@ -0,0 +1,365 @@ |
||||
#!/usr/bin/perl |
||||
# makeTarFiles.pl |
||||
|
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
# |
||||
# |
||||
use warnings; |
||||
use strict; |
||||
use Cwd; |
||||
use File::Basename; |
||||
|
||||
|
||||
my %destsubdir = ('emu' => 'sunos-5.11-sparc-32-sunc512', |
||||
'emu64' => 'sunos-5.11-sparc-64-sunc512', |
||||
'ostrich' => 'linux-el6-ppc64-gcc447', |
||||
'ostrichxl' => 'linux-el6-ppc64-xl13.1', |
||||
'platypus' => 'linux-centos6-x86_64-gcc447', |
||||
'platypus32' => 'linux-centos6-x86_64-32-gcc447', |
||||
'moohan' => 'linux-centos7-x86_64-gcc485', |
||||
'moohan32' => 'linux-centos7-x86_64-32-gcc485', |
||||
'kite' => 'osx-10.8-x86_64-clang5.1', |
||||
'quail' => 'osx-10.9-x86_64-clang6.0', |
||||
'osx1010test' => 'osx-10.10-x86_64-clang6.0'); |
||||
|
||||
my %szipdir = ('emu' => '/mnt/hdf/packages/szip/shared/encoder/SunOS-5.10', |
||||
'emu-static' => '/mnt/hdf/packages/szip/static/encoder/SunOS-5.10', |
||||
'emu64' => '/mnt/hdf/packages/szip-PIC/shared/encoder/SunOS-5.11-64', |
||||
'emu64-static' => '/mnt/hdf/packages/szip-PIC/shared/encoder/SunOS-5.11-64', |
||||
'kite' => '/mnt/hdf/packages/szip/shared/encoder/MacOS-10.8', |
||||
'kite-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/MacOS-10.8', |
||||
'ostrich32' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-ppc64-gcc', |
||||
'ostrich32-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-ibmppc64-gcc-32', |
||||
'ostrich' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-ppc64-gcc-64', |
||||
'ostrich-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-ibmppc64-gcc', |
||||
'ostrichxl' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-ppc64-gcc-64', |
||||
'ostrichxl-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-ibmppc64-gcc', |
||||
'osx1010test' => '/mnt/hdf/packages/szip/shared/encoder/MacOS-10.8', |
||||
'osx1010test-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/MacOS-10.8', |
||||
'moohan' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc', |
||||
'moohan-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-x86_64-gcc', |
||||
'moohan32' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc-m32', |
||||
'moohan32-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/Linux2.6-x86_64-gcc-m32', |
||||
'platypus32' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc-m32', |
||||
'platypus32-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/Linux2.6-x86_64-gcc-m32', |
||||
'platypus' => '/mnt/hdf/packages/szip/shared/encoder/Linux2.6-x86_64-gcc', |
||||
'platypus-static' => '/mnt/hdf/packages/szip/static/encoder/Linux2.6-x86_64-gcc', |
||||
'quail' => '/mnt/hdf/packages/szip/shared/encoder/MacOS-10.8', |
||||
'quail-static' => '/mnt/hdf/packages/szip-PIC/static/encoder/MacOS-10.8'); |
||||
|
||||
my %zlibdir = ('emu' => '/mnt/hdf/packages/zlib-125/shared/SunOS-5.10', |
||||
'emu-static' => '/mnt/hdf/packages/zlib-125/static/SunOS-5.10', |
||||
'emu64' => '/mnt/hdf/packages/zlib-123-PIC/SunOS-5.11-64', |
||||
'emu64-static' => '/mnt/hdf/packages/zlib-123-PIC/SunOS-5.11-64', |
||||
'kite' => ' /mnt/hdf/packages/zlib-125/shared/mac-intel-x86_64', |
||||
'kite-static' => ' /mnt/hdf/packages/zlib-125/static/mac-intel-x86_64', |
||||
'ostrich32' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc', |
||||
'ostrich32-static' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc', |
||||
'ostrich' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64', |
||||
'ostrich-static' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64', |
||||
'ostrichxl' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64', |
||||
'ostrichxl-static' => '/mnt/hdf/packages/zlib-125/PIC/Linux2.6-ppc64-gcc-64', |
||||
'osx1010test' => ' /mnt/hdf/packages/zlib-125/shared/mac-intel-x86_64', |
||||
'osx1010test-static' => ' /mnt/hdf/packages/zlib-125/static/mac-intel-x86_64', |
||||
'moohan' => '/mnt/hdf/packages/zlib-125/shared/Linux2.6-x86_64-gcc', |
||||
'moohan-static' => '/mnt/hdf/packages/zlib-125/static/Linux2.6-x86_64-gcc', |
||||
'moohan32' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32', |
||||
'moohan32-static' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32', |
||||
'platypus32' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32', |
||||
'platypus32-static' => '/mnt/hdf/packages/zlib-128/Linux2.6-x86_64-gcc-m32', |
||||
'platypus' => '/mnt/hdf/packages/zlib-125/shared/Linux2.6-x86_64-gcc', |
||||
'platypus-static' => '/mnt/hdf/packages/zlib-125/static/Linux2.6-x86_64-gcc', |
||||
'quail' => ' /mnt/hdf/packages/zlib-125/shared/mac-intel-x86_64', |
||||
'quail-static' => ' /mnt/hdf/packages/zlib-125/static/mac-intel-x86_64'); |
||||
|
||||
my $indirectory = "."; |
||||
$indirectory = shift; |
||||
|
||||
my $outdirectory = "."; |
||||
$outdirectory = shift; |
||||
|
||||
my $key = "."; |
||||
#$key = shift; |
||||
|
||||
my $scriptdirname = dirname(__FILE__); |
||||
|
||||
unless (-d $outdirectory) { |
||||
print "$outdirectory not found. Create it or choose another one and try again.\n"; |
||||
exit 1; |
||||
} |
||||
|
||||
print "Subdirectories of $indirectory will be tarred and stored in $outdirectory.\n"; |
||||
|
||||
|
||||
my $tarfilename; |
||||
my $tardirname; |
||||
my $output; |
||||
my $cmd; |
||||
|
||||
# I'm currently copying system zlibs for at least solaris and FreeBSD machines. Since this script runs on jam it may require scp to get the libs. |
||||
|
||||
#For future reference |
||||
# command for getting szlib files and links for shared binaries: |
||||
# tar cvf - -C <szipDir>/lib . | tar xvf - -C <libdir> . |
||||
# libz.so.1.2.3 and the static files should just be copied because they're in directories |
||||
# with other files. Then create the libz.so.1 and libz.so symbolic links. |
||||
sub addzandszlibs { |
||||
my $dir = shift; |
||||
my $indirectory = shift; |
||||
my $currentdir = getcwd(); |
||||
|
||||
if (-d "$indirectory/$dir" ) { |
||||
my $szdir = $szipdir{$dir}; |
||||
my $zldir = $zlibdir{$dir}; |
||||
if ($dir =~ /static/ || $dir =~ /ostrich/) { |
||||
$cmd = "cp $szdir/lib/libsz.a $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
$cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
} elsif ($dir eq "freedom" || $dir eq "loyalty") { |
||||
$cmd = "cp $szdir/lib/libsz.so.2 $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
$cmd = "cp $zldir/lib/libz.so.5 $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!"; |
||||
$cmd = "ln -s libsz.so.2 libsz.so"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libz.so.5 libz.so"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!"; |
||||
} elsif ($dir eq "quail" || $dir eq "kite" || $dir eq "osx1010test") { |
||||
#we've been using the static libraries for the macs - built with -fPIC |
||||
# $cmd = "cp $szdir/lib/libsz.a $indirectory/$dir/lib"; |
||||
# $output = `$cmd`; |
||||
# print $output; |
||||
# $cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib"; |
||||
# $output = `$cmd`; |
||||
# print $output; |
||||
$cmd = "cp $szdir/lib/libsz.2.0.0.dylib $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
$cmd = "cp $zldir/lib/libz.1.2.5.dylib $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!"; |
||||
$cmd = "ln -s libsz.2.0.0.dylib libsz.2.dylib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libsz.2.0.0.dylib libsz.dylib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libz.1.2.5.dylib libz.1.dylib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libz.1.2.5.dylib libz.dylib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!"; |
||||
|
||||
} elsif ($dir eq "emu64") { |
||||
$cmd = "cp $szdir/lib/libsz.so.2.0.0 $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
$cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!"; |
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so.2"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!"; |
||||
|
||||
} elsif ($dir eq "platypus32" || $dir eq "moohan32") { |
||||
$cmd = "cp $szdir/lib/libsz.so.2.0.0 $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
# $cmd = "cp $zldir/lib/libz.a $indirectory/$dir/lib"; |
||||
# $output = `$cmd`; |
||||
# print $output; |
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!"; |
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so.2"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
# $cmd = "ln -s libz.so.1.2.8 libz.so.1"; |
||||
# $output = `$cmd`; |
||||
# print $output; |
||||
|
||||
# $cmd = "ln -s libz.so.1.2.8 libz.so"; |
||||
# $output = `$cmd`; |
||||
# print $output; |
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!"; |
||||
|
||||
} else { |
||||
$cmd = "cp $szdir/lib/libsz.so.2.0.0 $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "cp $zldir/lib/libz.so.1.2.5 $indirectory/$dir/lib"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir "$indirectory/$dir/lib" or die "Couldn't change directory to $indirectory/$dir/lib, $!"; |
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so.2"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libsz.so.2.0.0 libsz.so"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libz.so.1.2.5 libz.so.1"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
$cmd = "ln -s libz.so.1.2.5 libz.so"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!"; |
||||
} |
||||
} |
||||
} |
||||
|
||||
sub makeTarFile { |
||||
my $directoryname = shift; |
||||
my $origdirname = shift; |
||||
my $tarfilename = shift; |
||||
my $tardirname = shift; |
||||
$cmd = "mv $indirectory/$origdirname $indirectory/$tardirname"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
if (-d $indirectory."/".$tardirname."/doc/hdf5/examples") { |
||||
$cmd = "mv $indirectory/$tardirname/doc/hdf5/examples $indirectory/$tardirname/examples"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
$cmd = "rm -rf $indirectory/$tardirname/doc"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
} |
||||
$cmd = "tar zcvf $outdirectory/$directoryname/$tarfilename -C $indirectory $tardirname"; |
||||
print "Need to run $cmd.\n"; |
||||
$output = `$cmd`; |
||||
sleep 10; |
||||
print "Create $tarfilename: $output\n"; |
||||
$cmd = "mv $indirectory/$tardirname $indirectory/$origdirname"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
} |
||||
|
||||
foreach $key (keys %destsubdir) { |
||||
print "Process ".$key."\n\n"; |
||||
#skip unless there's a directory by the name of $key or $key-static |
||||
next unless -d $indirectory.'/'.$key || -d $indirectory.'/'.$key."-static"; |
||||
my $version; |
||||
# This assumes a static directory. Probably the others should be checked if this |
||||
# doesn't exist. |
||||
$cmd = "grep \"HDF5 Version\" $indirectory/$key/lib/libhdf5.settings"; |
||||
$_ = `$cmd`; |
||||
print $_, "\n"; |
||||
s/HDF5 Version://; |
||||
s/^\s+//; |
||||
chomp; |
||||
$version = $_; |
||||
#my $directoryname = substr $destsubdir{$key}, 0, rindex($destsubdir{$key}, '-'); |
||||
my $directoryname = $destsubdir{$key}; |
||||
mkdir $outdirectory."/".$directoryname, 0755 unless -d $outdirectory."/".$directoryname; |
||||
my $staticdir = $key."-static"; |
||||
print $indirectory."/$key tarfile will be put in " . $outdirectory."/".$directoryname."\n"; |
||||
if (-e $outdirectory."/".$destsubdir{$key}."/README") { |
||||
print $outdirectory."/".$destsubdir{$key}."/README" . " has already been created.\n"; |
||||
} |
||||
else { |
||||
print "Make the Outer README file: "; |
||||
$cmd = "perl ./makeOuterREADME.pl $indirectory/$key $outdirectory $directoryname"; |
||||
print $cmd, "\n"; |
||||
my $output = `$cmd`; |
||||
print $output; |
||||
} |
||||
my $file = ""; |
||||
my @dirnames = ""; |
||||
opendir(DIR, $indirectory) or die "can't open .: $!"; |
||||
while (defined($file = readdir(DIR))) { |
||||
next unless ($file eq $key || $file eq "$key-static") && -d $indirectory."/".$file; |
||||
push @dirnames, $file; |
||||
} |
||||
foreach my $dir (@dirnames) { |
||||
next if $dir eq ""; |
||||
print "Make the Inner README files.\n"; |
||||
$cmd = "perl ./makeInternalREADME.pl $indirectory/$dir"; |
||||
print $cmd, "\n"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
print "Add the zlib and szip files for $dir.\n"; |
||||
&addzandszlibs($dir, $indirectory); |
||||
my $currentdir = getcwd(); |
||||
|
||||
print "Remove all lib*.la files from $dir/lib*.\n"; |
||||
$cmd = "rm $indirectory/$dir/lib*/lib*.la"; |
||||
print $cmd, "\n"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
|
||||
chdir "$indirectory/$dir/bin" or die "Couldn't change directory to $indirectory/$dir/bin, $!"; |
||||
|
||||
$cmd = "$scriptdirname/h5rmflags -force"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
chdir $currentdir or die "Couldn't change directory back to $currentdir, $!"; |
||||
print "Tar up the files into the output directory.\n"; |
||||
if (-d $indirectory."/".$dir) { |
||||
if ($dir =~ /static/) { |
||||
$tarfilename = "hdf5-$version-$destsubdir{$key}-static.tar.gz"; |
||||
$tardirname = "hdf5-$version-$destsubdir{$key}-static"; |
||||
} else { |
||||
$tarfilename = "hdf5-$version-$destsubdir{$key}-shared.tar.gz"; |
||||
$tardirname = "hdf5-$version-$destsubdir{$key}-shared"; |
||||
} |
||||
&makeTarFile($directoryname, $dir, $tarfilename, $tardirname); |
||||
} |
||||
} |
||||
# If this copy is done after h5rmflags is run on all the directories the compile scripts |
||||
# in the utilities directory will already have the paths removed. |
||||
if (-d $indirectory."/".$staticdir) { |
||||
$cmd = "cp -prv $indirectory/$staticdir/bin $outdirectory/$directoryname/utilities"; |
||||
$output = `$cmd`; |
||||
print $output; |
||||
} |
||||
} |
||||
|
||||
@ -0,0 +1,620 @@ |
||||
#!/bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# Make a release of hdf5. |
||||
|
||||
# Function definitions |
||||
# |
||||
# Print Usage page |
||||
USAGE() |
||||
{ |
||||
cat << EOF |
||||
Usage: $0 -d <dir> [--docver BRANCHNAME] [-h] [--private] <methods> ... |
||||
-d DIR The name of the directory where the release(s) should be |
||||
placed. |
||||
--docver BRANCHNAME This is added for 1.8 and beyond to get the correct |
||||
version of documentation files from the hdf5docs |
||||
repository. BRANCHNAME for v1.8 should be hdf5_1_8. |
||||
-h print the help page. |
||||
--private Make a private release with today's date in version information. |
||||
|
||||
This must be run at the top level of the source directory. |
||||
The other command-line options are the names of the programs to use |
||||
for compressing the resulting tar archive (if none are given then |
||||
"tar" is assumed): |
||||
|
||||
tar -- use tar and don't do any compressing. |
||||
gzip -- use gzip with "-9" and append ".gz" to the output name. |
||||
bzip2 -- use bzip2 with "-9" and append ".bz2" to the output name. |
||||
zip -- convert all text files to DOS style and form a zip file for Windows use. |
||||
cmake-tgz -- create a tar file using the gzip default level with a build-unix.sh |
||||
command file and all other CMake files needed to build HDF5 source |
||||
using CMake on unix machines. |
||||
cmake-zip -- convert all text files to DOS style and create a zip file including cmake |
||||
scripts and .bat files to build HDF5 source using CMake on Windows. |
||||
hpc-cmake-tgz |
||||
-- create a tar file using the gzip default level with a build-unix.sh |
||||
command file and all other CMake files needed to build HDF5 source |
||||
using CMake on unix machines, with HDF5options.cmake files for serial |
||||
and parallel builds on machines requiring batch jobs to run tests. |
||||
The default is for parallel build, with serial only build by changing |
||||
the HDF5options.cmake symlink to ser-HDF5options.cmake. More |
||||
information is available in the README_HPC file. |
||||
doc -- produce the latest doc tree in addition to the archive. |
||||
|
||||
A sha256 checksum is produced for each archive created and stored in the sha256 file. |
||||
|
||||
Examples: |
||||
|
||||
$ bin/release -d /tmp |
||||
/tmp/hdf5-1.8.13-RELEASE.txt |
||||
/tmp/hdf5-1.8.13.sha256 |
||||
/tmp/hdf5-1.8.13.tar |
||||
|
||||
$ bin/release -d /tmp gzip |
||||
/tmp/hdf5-1.8.13-RELEASE.txt |
||||
/tmp/hdf5-1.8.13.sha256 |
||||
/tmp/hdf5-1.8.13.tar.gz |
||||
|
||||
$ bin/release -d /tmp tar gzip zip |
||||
/tmp/hdf5-1.8.13-RELEASE.txt |
||||
/tmp/hdf5-1.8.13.sha256 |
||||
/tmp/hdf5-1.8.13.tar |
||||
/tmp/hdf5-1.8.13.tar.gz |
||||
/tmp/hdf5-1.8.13.tar.zip |
||||
|
||||
EOF |
||||
|
||||
} |
||||
|
||||
# Function name: tar2zip |
||||
# Convert the release tarball to a Windows zipball. |
||||
# |
||||
# Steps: |
||||
# 1. untar the tarball in a temporary directory; |
||||
# Note: do this in a temporary directory to avoid changing |
||||
# the original source directory which may be around. |
||||
# 2. convert all its text files to DOS (LF-CR) style; |
||||
# 3. form a zip file which is usable by Windows users. |
||||
# |
||||
# Parameters: |
||||
# $1 version |
||||
# $2 release tarball |
||||
# $3 output zipball file name |
||||
# |
||||
# Returns 0 if successful; 1 otherwise |
||||
# |
||||
tar2zip() |
||||
{ |
||||
if [ $# -ne 3 ]; then |
||||
echo "usage: tar2zip <tarfilename> <zipfilename>" |
||||
return 1 |
||||
fi |
||||
ztmpdir=/tmp/ztmpdir$$ |
||||
mkdir -p $ztmpdir |
||||
version=$1 |
||||
tarfile=$2 |
||||
zipfile=$3 |
||||
|
||||
# step 1: untar tarball in ztmpdir |
||||
(cd $ztmpdir; tar xf -) < $tarfile |
||||
# sanity check |
||||
if [ ! -d $ztmpdir/$version ]; then |
||||
echo "untar did not create $ztmpdir/$version source dir" |
||||
# cleanup |
||||
rm -rf $ztmpdir |
||||
return 1 |
||||
fi |
||||
# step 2: convert text files |
||||
# There maybe a simpler way to do this. |
||||
# options used in unix2dos: |
||||
# -k Keep the date stamp |
||||
# -q quiet mode |
||||
# grep redirect output to /dev/null because -q or -s are not portable. |
||||
find $ztmpdir/$version | \ |
||||
while read inf; do \ |
||||
if file $inf | grep "$inf\: .*text" > /dev/null 2>&1 ; then \ |
||||
unix2dos -q -k $inf; \ |
||||
fi\ |
||||
done |
||||
# step 3: make zipball |
||||
# -9 maximum compression |
||||
# -y Store symbolic links as such in the zip archive |
||||
# -r recursive |
||||
# -q quiet |
||||
(cd $ztmpdir; zip -9 -y -r -q $version.zip $version) |
||||
mv $ztmpdir/$version.zip $zipfile |
||||
|
||||
# cleanup |
||||
rm -rf $ztmpdir |
||||
} |
||||
|
||||
# Function name: tar2cmakezip |
||||
# Convert the release tarball to a Windows zipball with files to run CMake build. |
||||
# |
||||
# Steps: |
||||
# 1. untar the tarball in a temporary directory; |
||||
# Note: do this in a temporary directory to avoid changing |
||||
# the original source directory which may be around. |
||||
# 2. add build-unix.sh script. |
||||
# 3. add LIBAEC.tar.gz, ZLib.tar.gz and cmake files to top level directory. |
||||
# 4. create gzipped tar file with these contents: |
||||
# build-unix.sh script |
||||
# hdf5-<version> source code directory extracted from tar file |
||||
# CTestScript.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# HDF5config.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# HDF5options.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# LIBAEC.tar.gz copied from /mnt/scr1/pre-release/hdf5/CMake |
||||
# ZLib.tar.gz copied from /mnt/scr1/pre-release/hdf5/CMake |
||||
|
||||
|
||||
# Parameters: |
||||
# $1 version |
||||
# $2 release tarball |
||||
# $3 output zipball file name |
||||
# |
||||
# Returns 0 if successful; 1 otherwise |
||||
# |
||||
# need function to create another temporary directory, extract the |
||||
# $tmpdir/$HDF5_VERS.tar into it, create build-VS*.bat files, |
||||
# add CTestScript.cmake, HDF5config.cmake, LIBAEC.tar.gz |
||||
# ZLib.tar.gz, HDF5 examples, and then zip it. |
||||
tar2cmakezip() |
||||
{ |
||||
if [ $# -ne 3 ]; then |
||||
echo "usage: tar2cmakezip <tarfilename> <zipfilename>" |
||||
return 1 |
||||
fi |
||||
cmziptmpdir=/tmp/cmziptmpdir$$ |
||||
cmziptmpsubdir=$cmziptmpdir/CMake-$HDF5_VERS |
||||
mkdir -p $cmziptmpsubdir |
||||
version=$1 |
||||
tarfile=$2 |
||||
zipfile=$3 |
||||
|
||||
# step 1: untar tarball in cmgztmpdir |
||||
(cd $cmziptmpsubdir; tar xf -) < $tarfile |
||||
# sanity check |
||||
if [ ! -d $cmziptmpsubdir/$version ]; then |
||||
echo "untar did not create $cmziptmpsubdir/$version source dir" |
||||
# cleanup |
||||
rm -rf $cmziptmpdir |
||||
return 1 |
||||
fi |
||||
|
||||
# step 2: add batch file for building CMake on window |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS2015 -C Release -V -O hdf5.log" > build-VS2015-32.bat; chmod 755 build-VS2015-32.bat) |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS201564 -C Release -V -O hdf5.log" > build-VS2015-64.bat; chmod 755 build-VS2015-64.bat) |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS2017 -C Release -V -O hdf5.log" > build-VS2017-32.bat; chmod 755 build-VS2017-32.bat) |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS201764 -C Release -V -O hdf5.log" > build-VS2017-64.bat; chmod 755 build-VS2017-64.bat) |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS2019 -C Release -V -O hdf5.log" > build-VS2019-32.bat; chmod 755 build-VS2019-32.bat) |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS201964 -C Release -V -O hdf5.log" > build-VS2019-64.bat; chmod 755 build-VS2019-64.bat) |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS2022 -C Release -V -O hdf5.log" > build-VS2022-32.bat; chmod 755 build-VS2022-32.bat) |
||||
(cd $cmziptmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=VS202264 -C Release -V -O hdf5.log" > build-VS2022-64.bat; chmod 755 build-VS2022-64.bat) |
||||
|
||||
# step 3: add LIBAEC.tar.gz, ZLib.tar.gz and cmake files |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/LIBAEC.tar.gz $cmziptmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/ZLib.tar.gz $cmziptmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/HDF5Examples-2.0.3-Source.zip $cmziptmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-1_14_1.zip $cmziptmpsubdir |
||||
cp $cmziptmpsubdir/$version/config/cmake/scripts/CTestScript.cmake $cmziptmpsubdir |
||||
cp $cmziptmpsubdir/$version/config/cmake/scripts/HDF5config.cmake $cmziptmpsubdir |
||||
cp $cmziptmpsubdir/$version/config/cmake/scripts/HDF5options.cmake $cmziptmpsubdir |
||||
|
||||
# step 4: convert text files |
||||
# There maybe a simpler way to do this. |
||||
# options used in unix2dos: |
||||
# -k Keep the date stamp |
||||
# -q quiet mode |
||||
# grep redirect output to /dev/null because -q or -s are not portable. |
||||
find $cmziptmpsubdir/$version | \ |
||||
while read inf; do \ |
||||
if file $inf | grep "$inf\: .*text" > /dev/null 2>&1 ; then \ |
||||
unix2dos -q -k $inf; \ |
||||
fi\ |
||||
done |
||||
|
||||
# step 3: make zipball |
||||
# -9 maximum compression |
||||
# -y Store symbolic links as such in the zip archive |
||||
# -r recursive |
||||
# -q quiet |
||||
(cd $cmziptmpdir; zip -9 -y -r -q CMake-$version.zip *) |
||||
mv $cmziptmpdir/CMake-$version.zip $zipfile |
||||
|
||||
# cleanup |
||||
rm -rf $cmziptmpdir |
||||
} |
||||
|
||||
# Function name: tar2cmaketgz |
||||
# Convert the release tarball to a gzipped tar file with files to run CMake build. |
||||
# |
||||
# |
||||
# Steps: |
||||
# 1. untar the tarball in a temporary directory; |
||||
# Note: do this in a temporary directory to avoid changing |
||||
# the original source directory which may be around. |
||||
# 2. add build-unix.sh script. |
||||
# 3. add LIBAEC.tar.gz, ZLib.tar.gz and cmake files to top level directory. |
||||
# 4. create gzipped tar file with these contents: |
||||
# build-unix.sh script |
||||
# hdf5-<version> source code directory extracted from tar file |
||||
# CTestScript.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# HDF5config.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# HDF5options.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# LIBAEC.tar.gz copied from /mnt/scr1/pre-release/hdf5/CMake |
||||
# ZLib.tar.gz copied from /mnt/scr1/pre-release/hdf5/CMake |
||||
|
||||
|
||||
# Parameters: |
||||
# $1 version |
||||
# $2 release tarball |
||||
# $3 output zipball file name |
||||
# |
||||
# Returns 0 if successful; 1 otherwise |
||||
# |
||||
# need function to create another temporary directory, extract the |
||||
# $tmpdir/$HDF5_VERS.tar into it, create build-unix.sh, |
||||
# add CTestScript.cmake, HDF5config.cmake, LIBAEC.tar.gz |
||||
# ZLib.tar.gz, HDF5 examples, and then tar.gz it. |
||||
tar2cmaketgz() |
||||
{ |
||||
if [ $# -ne 3 ]; then |
||||
echo "usage: tar2cmaketgz <tarfilename> <tgzfilename>" |
||||
return 1 |
||||
fi |
||||
cmgztmpdir=/tmp/cmgztmpdir$$ |
||||
cmgztmpsubdir=$cmgztmpdir/CMake-$HDF5_VERS |
||||
mkdir -p $cmgztmpsubdir |
||||
version=$1 |
||||
tarfile=$2 |
||||
tgzfile=$3 |
||||
|
||||
# step 1: untar tarball in cmgztmpdir |
||||
(cd $cmgztmpsubdir; tar xf -) < $tarfile |
||||
# sanity check |
||||
if [ ! -d $cmgztmpsubdir/$version ]; then |
||||
echo "untar did not create $cmgztmpsubdir/$version source dir" |
||||
# cleanup |
||||
rm -rf $cmgztmpdir |
||||
return 1 |
||||
fi |
||||
|
||||
|
||||
# step 2: add build-unix.sh script |
||||
(cd $cmgztmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=Unix -C Release -V -O hdf5.log" > build-unix.sh; chmod 755 build-unix.sh) |
||||
|
||||
# step 3: add LIBAEC.tar.gz, ZLib.tar.gz and cmake files |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/LIBAEC.tar.gz $cmgztmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/ZLib.tar.gz $cmgztmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/HDF5Examples-2.0.3-Source.tar.gz $cmgztmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-1_14_1.tar.gz $cmgztmpsubdir |
||||
cp $cmgztmpsubdir/$version/config/cmake/scripts/CTestScript.cmake $cmgztmpsubdir |
||||
cp $cmgztmpsubdir/$version/config/cmake/scripts/HDF5config.cmake $cmgztmpsubdir |
||||
cp $cmgztmpsubdir/$version/config/cmake/scripts/HDF5options.cmake $cmgztmpsubdir |
||||
tar czf $DEST/CMake-$HDF5_VERS.tar.gz -C $cmgztmpdir . || exit 1 |
||||
|
||||
# cleanup |
||||
rm -rf $cmgztmpdir |
||||
} |
||||
|
||||
# Function name: tar2hpccmaketgz |
||||
# Convert the release tarball to a gzipped tarfile with files to run CMake build |
||||
# and HDF5options.cmake files for parallel or serial only builds where build |
||||
# tests are run on compute nodes using batch scripts. |
||||
# |
||||
# Steps: |
||||
# 1. untar the tarball in a temporary directory; |
||||
# Note: do this in a temporary directory to avoid changing |
||||
# the original source directory which may be around. |
||||
# 2. add build-unix.sh script. |
||||
# 3. add LIBAEC.tar.gz, ZLib.tar.gz and cmake files to top level directory. |
||||
# 4. create gzipped tar file with these contents: |
||||
# build-unix.sh script |
||||
# hdf5-<version> source code directory extracted from tar file |
||||
# CTestScript.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# HDF5config.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# HDF5options.cmake cmake file copied from <hdf5 source code>/config/cmake/scripts |
||||
# LIBAEC.tar.gz copied from /mnt/scr1/pre-release/hdf5/CMake |
||||
# ZLib.tar.gz copied from /mnt/scr1/pre-release/hdf5/CMake |
||||
# |
||||
# 5. For HPC-CMake tgz file the following are also needed in the top-level directory: |
||||
# README_HPC copied from release_docs |
||||
# ser-HDF5options.cmake copied from <hdf5 source code>/config/cmake/scripts/HPC |
||||
# par-HDF5options.cmake copied from <hdf5 source code>/config/cmake/scripts/HPC |
||||
# HDF5options.cmake symlink to par-HDF5options.cmake |
||||
# |
||||
|
||||
# Parameters: |
||||
# $1 version |
||||
# $2 release tarball |
||||
# $3 output zipball file name |
||||
# |
||||
# Returns 0 if successful; 1 otherwise |
||||
# |
||||
# need function to create another temporary directory, extract the |
||||
# $tmpdir/$HDF5_VERS.tar into it, create build-unix.sh, |
||||
# add CTestScript.cmake, HDF5config.cmake, LIBAEC.tar.gz |
||||
# ZLib.tar.gz, HDF5 examples, and then tar.gz it. |
||||
tar2hpccmaketgz() |
||||
{ |
||||
if [ $# -ne 3 ]; then |
||||
echo "usage: tar2hpccmaketgz <tarfilename> <tgzfilename>" |
||||
return 1 |
||||
fi |
||||
cmgztmpdir=/tmp/cmgztmpdir$$ |
||||
cmgztmpsubdir=$cmgztmpdir/HPC-CMake-$HDF5_VERS |
||||
mkdir -p $cmgztmpsubdir |
||||
version=$1 |
||||
tarfile=$2 |
||||
tgzfile=$3 |
||||
|
||||
# step 1: untar tarball in cmgztmpdir |
||||
(cd $cmgztmpsubdir; tar xf -) < $tarfile |
||||
# sanity check |
||||
if [ ! -d $cmgztmpsubdir/$version ]; then |
||||
echo "untar did not create $cmgztmpsubdir/$version source dir" |
||||
# cleanup |
||||
rm -rf $cmgztmpdir |
||||
return 1 |
||||
fi |
||||
|
||||
|
||||
# step 2: add build-unix.sh script |
||||
(cd $cmgztmpsubdir; echo "ctest -S HDF5config.cmake,BUILD_GENERATOR=Unix -C Release -V -O hdf5.log" > build-unix.sh; chmod 755 build-unix.sh) |
||||
|
||||
# step 3: add LIBAEC.tar.gz, ZLib.tar.gz and cmake files |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/LIBAEC.tar.gz $cmgztmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/ZLib.tar.gz $cmgztmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/HDF5Examples-2.0.3-Source.tar.gz $cmgztmpsubdir |
||||
cp /mnt/scr1/pre-release/hdf5/CMake/hdf5_plugins-1_14_1.tar.gz $cmgztmpsubdir |
||||
cp $cmgztmpsubdir/$version/config/cmake/scripts/CTestScript.cmake $cmgztmpsubdir |
||||
cp $cmgztmpsubdir/$version/config/cmake/scripts/HDF5config.cmake $cmgztmpsubdir |
||||
|
||||
cp $cmgztmpsubdir/$version/release_docs/README_HPC $cmgztmpsubdir |
||||
cp $cmgztmpsubdir/$version/config/cmake/scripts/HPC/ser-HDF5options.cmake $cmgztmpsubdir |
||||
cp $cmgztmpsubdir/$version/config/cmake/scripts/HPC/par-HDF5options.cmake $cmgztmpsubdir |
||||
(cd $cmgztmpsubdir; ln -s par-HDF5options.cmake HDF5options.cmake) |
||||
tar czf $DEST/HPC-CMake-$HDF5_VERS.tar.gz -C $cmgztmpdir . || exit 1 |
||||
|
||||
# cleanup |
||||
rm -rf $cmgztmpdir |
||||
} |
||||
|
||||
# This command must be run at the top level of the hdf5 source directory. |
||||
# Verify this requirement. |
||||
if [ ! \( -f configure.ac -a -f bin/release \) ]; then |
||||
echo "$0 must be run at the top level of the hdf5 source directory" |
||||
exit 1 |
||||
fi |
||||
|
||||
# Defaults |
||||
DEST=releases |
||||
VERS=`perl bin/h5vers` |
||||
VERS_OLD= |
||||
test "$VERS" || exit 1 |
||||
verbose=yes |
||||
release_date=`date +%F` |
||||
today=`date +%Y%m%d` |
||||
pmode='no' |
||||
tmpdir="../#release_tmp.$$" # tmp work directory |
||||
DOC_URL=https://git@bitbucket.hdfgroup.org/scm/hdffv/hdf5doc.git |
||||
CPPLUS_RM_NAME=cpplus_RM |
||||
MAINT_MODE_ENABLED="" |
||||
|
||||
# If maintainer mode is enabled in configure, it should be disabled for release, |
||||
# and enabled again after release files have been created. If already disabled |
||||
# there's no need to do either. |
||||
MAINT_MODE_ENABLED=`grep ^AM_MAINTAINER_MODE ./configure.ac | grep enable` |
||||
if [ "${MAINT_MODE_ENABLED}" != "" ]; then |
||||
bin/switch_maint_mode -disable ./configure.ac |
||||
fi |
||||
|
||||
# Restore previous Version information |
||||
RESTORE_VERSION() |
||||
{ |
||||
if [ X-${VERS_OLD} != X- ]; then |
||||
echo restoring version information back to $VERS_OLD |
||||
rm -f config/lt_vers.am |
||||
cp $tmpdir/lt_vers.am config/lt_vers.am |
||||
bin/h5vers -s $VERS_OLD |
||||
VERS_OLD= |
||||
fi |
||||
} |
||||
|
||||
|
||||
# Command-line arguments |
||||
while [ -n "$1" ]; do |
||||
arg=$1 |
||||
shift |
||||
case "$arg" in |
||||
-d) |
||||
DEST=$1 |
||||
shift |
||||
;; |
||||
-h) |
||||
USAGE |
||||
exit 0 |
||||
;; |
||||
--private) |
||||
pmode=yes |
||||
;; |
||||
--docver) |
||||
DOCVERSION=$1 |
||||
shift |
||||
;; |
||||
-*) |
||||
echo "Unknown switch: $arg" 1>&2 |
||||
USAGE |
||||
exit 1 |
||||
;; |
||||
*) |
||||
methods="$methods $arg" |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# Default method is tar |
||||
if [ "X$methods" = "X" ]; then |
||||
methods="tar" |
||||
fi |
||||
|
||||
# Create the temporary work directory. |
||||
if mkdir $tmpdir; then |
||||
echo "temporary work directory for release. "\ |
||||
"Can be deleted after release completes." > $tmpdir/README |
||||
else |
||||
echo "Failed to mkdir tmpdir($tmpdir)" |
||||
exit 1 |
||||
fi |
||||
|
||||
# setup restoration in case of abort. |
||||
trap RESTORE_VERSION 0 |
||||
|
||||
if [ X$pmode = Xyes ]; then |
||||
VERS_OLD=$VERS |
||||
# Copy old version of config/lt_vers.am, since it's hard to |
||||
# "undo" changes to it. |
||||
cp config/lt_vers.am $tmpdir |
||||
# Set version information to m.n.r-of$today. |
||||
# (h5vers does not correctly handle just m.n.r-$today.) |
||||
VERS=`echo $VERS | sed -e s/-.*//`-of$today |
||||
echo Private release of $VERS |
||||
else |
||||
bin/h5vers -s $VERS |
||||
fi |
||||
|
||||
# Store hdf5-$VERS ("hdf5-1.7.51", e.g.) to a variable to avoid typos |
||||
HDF5_VERS=hdf5-$VERS |
||||
|
||||
test "$verbose" && echo "Releasing $HDF5_VERS to $DEST" 1>&2 |
||||
if [ ! -d $DEST ]; then |
||||
echo " Destination directory $DEST does not exist" 1>&2 |
||||
exit 1 |
||||
fi |
||||
|
||||
# Create a symlink to the source so files in the tarball have the prefix |
||||
# we want (gnu's --transform isn't portable) |
||||
ln -s `pwd` $tmpdir/$HDF5_VERS || exit 1 |
||||
|
||||
# Save a backup copy of Makefile if exists. |
||||
test -f Makefile && mv Makefile $tmpdir/Makefile.x |
||||
cp -p Makefile.dist Makefile |
||||
|
||||
# Update README.md and release_docs/RELEASE.txt with release information in |
||||
# line 1. |
||||
for f in README.md release_docs/RELEASE.txt; do |
||||
echo "HDF5 version $VERS released on $release_date" >$f.x |
||||
sed -e 1d $f >>$f.x |
||||
mv $f.x $f |
||||
# Make sure new files are of the right access mode |
||||
chmod 644 $f |
||||
done |
||||
|
||||
# develop is different than branches. |
||||
if [ "${DOCVERSION}" ]; then |
||||
DOC_URL="$DOC_URL -b ${DOCVERSION}" |
||||
fi |
||||
|
||||
# Create the tar file |
||||
test "$verbose" && echo " Running tar..." 1>&2 |
||||
(cd "$tmpdir" && exec tar -ch --exclude-vcs -f "$HDF5_VERS.tar" "./$HDF5_VERS" || exit 1 ) |
||||
|
||||
# Compress |
||||
SHA256=$HDF5_VERS.sha256 |
||||
cp /dev/null $DEST/$SHA256 |
||||
for comp in $methods; do |
||||
case $comp in |
||||
tar) |
||||
cp -p $tmpdir/$HDF5_VERS.tar $DEST/$HDF5_VERS.tar |
||||
(cd $DEST; sha256sum $HDF5_VERS.tar >> $SHA256) |
||||
;; |
||||
gzip) |
||||
test "$verbose" && echo " Running gzip..." 1>&2 |
||||
gzip -9 <$tmpdir/$HDF5_VERS.tar >$DEST/$HDF5_VERS.tar.gz |
||||
(cd $DEST; sha256sum $HDF5_VERS.tar.gz >> $SHA256) |
||||
;; |
||||
cmake-tgz) |
||||
test "$verbose" && echo " Creating CMake tar.gz file..." 1>&2 |
||||
tar2cmaketgz $HDF5_VERS $tmpdir/$HDF5_VERS.tar $DEST/CMake-$HDF5_VERS.tar.gz 1>&2 |
||||
(cd $DEST; sha256sum CMake-$HDF5_VERS.tar.gz >> $SHA256) |
||||
;; |
||||
hpc-cmake-tgz) |
||||
test "$verbose" && echo " Creating HPC-CMake tar.gz file..." 1>&2 |
||||
tar2hpccmaketgz $HDF5_VERS $tmpdir/$HDF5_VERS.tar $DEST/HPC-CMake-$HDF5_VERS.tar.gz 1>&2 |
||||
(cd $DEST; sha256sum HPC-CMake-$HDF5_VERS.tar.gz >> $SHA256) |
||||
;; |
||||
bzip2) |
||||
test "$verbose" && echo " Running bzip2..." 1>&2 |
||||
bzip2 -9 <$tmpdir/$HDF5_VERS.tar >$DEST/$HDF5_VERS.tar.bz2 |
||||
(cd $DEST; sha256sum $HDF5_VERS.tar.bz2 >> $SHA256) |
||||
;; |
||||
zip) |
||||
test "$verbose" && echo " Creating zip ball..." 1>&2 |
||||
tar2zip $HDF5_VERS $tmpdir/$HDF5_VERS.tar $DEST/$HDF5_VERS.zip 1>&2 |
||||
(cd $DEST; sha256sum $HDF5_VERS.zip >> $SHA256) |
||||
;; |
||||
cmake-zip) |
||||
test "$verbose" && echo " Creating CMake-zip ball..." 1>&2 |
||||
tar2cmakezip $HDF5_VERS $tmpdir/$HDF5_VERS.tar $DEST/CMake-$HDF5_VERS.zip 1>&2 |
||||
(cd $DEST; sha256sum CMake-$HDF5_VERS.zip >> $SHA256) |
||||
;; |
||||
doc) |
||||
if [ "${DOCVERSION}" = "" ]; then |
||||
DOCVERSION=master |
||||
fi |
||||
test "$verbose" && echo " Creating docs..." 1>&2 |
||||
# Check out docs from git repo |
||||
(cd $tmpdir; git clone -q $DOC_URL ${DOCVERSION} > /dev/null) || exit 1 |
||||
# Create doxygen C++ RM |
||||
(cd c++/src && doxygen cpp_doc_config > /dev/null ) || exit 1 |
||||
# Replace version of C++ RM with just-created version |
||||
rm -rf $tmpdir/${DOCVERSION}/html/$CPPLUS_RM_NAME || exit 1 |
||||
mv c++/src/$CPPLUS_RM_NAME $tmpdir/${DOCVERSION}/html/$CPPLUS_RM_NAME || exit 1 |
||||
# Compress the docs and move them to the release area |
||||
mv $tmpdir/${DOCVERSION} $tmpdir/${HDF5_VERS}_docs || exit 1 |
||||
(cd $tmpdir && tar cf ${HDF5_VERS}_docs.tar ${HDF5_VERS}_docs) || exit 1 |
||||
mv $tmpdir/${HDF5_VERS}_docs.tar $DEST || exit 1 |
||||
;; |
||||
*) |
||||
echo "***Error*** Unknown method $comp" |
||||
exit 1 |
||||
;; |
||||
esac |
||||
done |
||||
|
||||
# If AM_MAINTAINER_MODE was enabled before running this script |
||||
# restore it to "enabled". |
||||
if [ "${MAINT_MODE_ENABLED}" != "" ]; then |
||||
bin/switch_maint_mode -enable ./configure.ac |
||||
fi |
||||
|
||||
# Copy the RELEASE.txt to the release area. |
||||
cp release_docs/RELEASE.txt $DEST/$HDF5_VERS-RELEASE.txt |
||||
|
||||
# Remove distributed Makefile and restore previous Makefile if existed. |
||||
rm -f Makefile |
||||
test -f $tmpdir/Makefile.x && mv $tmpdir/Makefile.x Makefile |
||||
|
||||
# Restore OLD version information, then no need for trap. |
||||
if [ X$pmode = Xyes ]; then |
||||
RESTORE_VERSION |
||||
trap 0 |
||||
fi |
||||
|
||||
# Remove temporary things |
||||
rm -rf $tmpdir |
||||
|
||||
echo "DONE" |
||||
|
||||
exit 0 |
||||
@ -0,0 +1,68 @@ |
||||
#!/bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# A script to clean up the action of autogen.sh |
||||
# |
||||
# If this script fails to clean up generated files on a particular |
||||
# platform, please contact help@hdfgroup.org or comment on the forum. |
||||
|
||||
echo |
||||
echo "*******************************" |
||||
echo "* HDF5 autogen.sh undo script *" |
||||
echo "*******************************" |
||||
echo |
||||
|
||||
echo "Remove autom4te.cache directory" |
||||
rm -rf autom4te.cache |
||||
|
||||
echo "Remove configure script" |
||||
rm -f configure |
||||
|
||||
echo "Remove Makefile.in files" |
||||
find . -type f -name 'Makefile.in' -exec rm {} \; |
||||
|
||||
echo "Remove files generated by libtoolize" |
||||
rm -f bin/ltmain.sh |
||||
rm -f m4/libtool.m4 |
||||
rm -f m4/ltoptions.m4 |
||||
rm -f m4/ltsugar.m4 |
||||
rm -f m4/ltversion.m4 |
||||
rm -f m4/lt~obsolete.m4 |
||||
|
||||
echo "Remove files generated by automake" |
||||
rm -f bin/compile |
||||
rm -f bin/config.guess |
||||
rm -f bin/config.sub |
||||
rm -f bin/install-sh |
||||
rm -f bin/missing |
||||
rm -f bin/test-driver |
||||
rm -f bin/depcomp |
||||
|
||||
echo "Remove files generated by autoheader" |
||||
rm -f src/H5config.h.in |
||||
|
||||
echo "Remove files generated by bin/make_err" |
||||
rm -f src/H5Epubgen.h |
||||
rm -f src/H5Einit.h |
||||
rm -f src/H5Eterm.h |
||||
rm -f src/H5Edefin.h |
||||
|
||||
echo "Remove files generated by bin/make_vers" |
||||
rm -f src/H5version.h |
||||
|
||||
echo "Remove files generated by bin/make_overflow" |
||||
rm -f src/H5overflow.h |
||||
|
||||
echo "Remove remaining generated files" |
||||
rm -f aclocal.m4 |
||||
|
||||
@ -0,0 +1,87 @@ |
||||
#!/usr/bin/env perl |
||||
require 5.003; |
||||
use warnings; |
||||
$indent=4; |
||||
|
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
# Run program in background |
||||
# |
||||
use warnings; |
||||
use strict; |
||||
|
||||
use Carp; |
||||
use Time::HiRes; |
||||
use POSIX 'setsid'; |
||||
|
||||
my $child_pid; |
||||
my $child_proc; |
||||
my $cmd = $ARGV[0]; |
||||
my $debug = 1; |
||||
|
||||
print "\nStart child process\n"; |
||||
start_child(); |
||||
print "\nStarted child process\n"; |
||||
|
||||
sub start_child { |
||||
die "cannot execute cmd: $cmd" unless -x $cmd; |
||||
if ($^O eq 'MSWin32') { # Windows |
||||
require Win32::Process; |
||||
Win32::Process::Create($child_proc, $cmd, $cmd, 0, 0, ".") || confess "Could not spawn child: $!"; |
||||
$child_pid = $child_proc->GetProcessID(); |
||||
} |
||||
else { # Unix |
||||
$SIG{CHLD} = 'IGNORE'; |
||||
$child_pid = fork(); |
||||
unless (defined $child_pid) { |
||||
confess "Could not spawn child (Unix): $!"; |
||||
} |
||||
if ($child_pid == 0) { # child |
||||
unless ($debug) { |
||||
open STDIN, "<", "/dev/null" or die "Can't read /dev/null: $!"; |
||||
open STDOUT, ">", "/dev/null" or die "Can't write /dev/null: $!"; |
||||
} |
||||
setsid or warn "setsid cannot start a new session: $!"; |
||||
unless ($debug) { |
||||
open STDERR, '>&STDOUT' or die "Can't dup stdout: $!"; |
||||
} |
||||
local $| = 1; |
||||
unless (exec($cmd)) { |
||||
confess "Could not start child: $cmd: $!"; |
||||
CORE::exit(0); |
||||
} |
||||
} |
||||
# parent |
||||
$SIG{CHLD} = 'DEFAULT'; |
||||
} |
||||
# catch early child exit, e.g. if program path is incorrect |
||||
sleep(1.0); |
||||
POSIX::waitpid(-1, POSIX::WNOHANG()); # clean up any defunct child process |
||||
if (kill(0,$child_pid)) { |
||||
print "\nStarted child process id $child_pid\n"; |
||||
} |
||||
else { |
||||
warn "Child process exited quickly: $cmd: process $child_pid"; |
||||
} |
||||
} |
||||
|
||||
sub stop_child |
||||
{ |
||||
if ($^O eq 'MSWin32') { # Windows |
||||
Win32::Process::KillProcess($child_pid,0); |
||||
} |
||||
else { # Unix |
||||
kill 9, $child_pid || warn "could not kill process $child_pid: $!"; |
||||
} |
||||
print "Stopped child process id $child_pid\n"; |
||||
} |
||||
@ -0,0 +1,80 @@ |
||||
#!/bin/sh |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
# Switch AM_MAINTAINER_MODE value in configure.ac |
||||
# Usage: See USAGE() |
||||
# Programmer: Dana Robinson |
||||
# Creation date: January 2016 |
||||
|
||||
USAGE() |
||||
{ |
||||
cat <<EOF |
||||
|
||||
switch_maint_mode reverses the status of AM_MAINTAINER_MODE in |
||||
configure.ac from enable to disable or vice-versa. When enabled, |
||||
this feature forces the autotools to run when the input files are |
||||
older than the output files. This is the default for development |
||||
branches. When disabled, the autotools will NOT be re-run regardless |
||||
of their timestamps or any modifications. This is the default for |
||||
tarballs and release branches since it avoids having end-users |
||||
requiring the autotools. |
||||
|
||||
Command Syntax |
||||
============== |
||||
switch_maint_mode [-help] [-enable|disable] <path-to-configure.ac> |
||||
|
||||
EOF |
||||
} |
||||
|
||||
MODE="notset" |
||||
CONFIG_AC_PATH= |
||||
|
||||
# Display help/usage if any options were passed in |
||||
while [ $# -gt 0 ]; do |
||||
case "$1" in |
||||
-enable) |
||||
MODE="enable" |
||||
;; |
||||
-disable) |
||||
MODE="disable" |
||||
;; |
||||
-help) |
||||
USAGE |
||||
exit 0 |
||||
;; |
||||
*) |
||||
CONFIG_AC_PATH="$1" |
||||
;; |
||||
esac |
||||
shift |
||||
done |
||||
|
||||
# Did we get a file path? |
||||
if test -z $CONFIG_AC_PATH ; then |
||||
USAGE |
||||
exit 1 |
||||
fi |
||||
|
||||
# Did we get a mode? |
||||
if test -z $MODE ; then |
||||
USAGE |
||||
exit 1 |
||||
fi |
||||
|
||||
# Run perl over configure.ac |
||||
if test "X-$MODE" = "X-enable" ; then |
||||
perl -pi -e 's/^(AM_MAINTAINER_MODE\(\[)([a-z]+)(\]\))/$1enable$3/g' $CONFIG_AC_PATH |
||||
fi |
||||
if test "X-$MODE" = "X-disable" ; then |
||||
perl -pi -e 's/^(AM_MAINTAINER_MODE\(\[)([a-z]+)(\]\))/$1disable$3/g' $CONFIG_AC_PATH |
||||
fi |
||||
|
||||
@ -0,0 +1,548 @@ |
||||
#!/usr/bin/env perl |
||||
## |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
## |
||||
require 5.003; |
||||
use warnings; |
||||
$Source = ""; |
||||
|
||||
############################################################################## |
||||
# A map from type name to type letter. We use this map for two reasons: |
||||
# 1. We want the debugging stuff in the source code to be as unobtrusive as |
||||
# possible, which means as compact as possible. |
||||
# 2. It's easier (faster) to parse these one and two-letter types in the C |
||||
# functions that display debugging results. |
||||
# |
||||
# All type strings are one or two characters. One-character strings |
||||
# are always lower case and should be used for common types. |
||||
# Two-character strings begin with an upper-case letter which is |
||||
# usually the same as the package name. |
||||
# |
||||
%TypeString = ("haddr_t" => "a", |
||||
"H5A_info_t" => "Ai", |
||||
"H5A_operator1_t" => "Ao", |
||||
"H5A_operator2_t" => "AO", |
||||
"hbool_t" => "b", |
||||
"H5AC_cache_config_t" => "Cc", |
||||
"H5AC_cache_image_config_t" => "CC", |
||||
"double" => "d", |
||||
"H5D_alloc_time_t" => "Da", |
||||
"H5D_append_cb_t" => "DA", |
||||
"H5FD_mpio_collective_opt_t" => "Dc", |
||||
"H5D_selection_io_mode_t" => "DC", |
||||
"H5D_fill_time_t" => "Df", |
||||
"H5D_fill_value_t" => "DF", |
||||
"H5D_gather_func_t" => "Dg", |
||||
"H5FD_mpio_chunk_opt_t" => "Dh", |
||||
"H5D_mpio_actual_io_mode_t" => "Di", |
||||
"H5FD_file_image_callbacks_t" => "DI", |
||||
"H5D_chunk_index_t" => "Dk", |
||||
"H5D_layout_t" => "Dl", |
||||
"H5D_mpio_no_collective_cause_t" => "Dn", |
||||
"H5D_mpio_actual_chunk_opt_mode_t" => "Do", |
||||
"H5D_operator_t" => "DO", |
||||
"H5D_space_status_t" => "Ds", |
||||
"H5D_scatter_func_t" => "DS", |
||||
"H5FD_mpio_xfer_t" => "Dt", |
||||
"H5D_vds_view_t" => "Dv", |
||||
"H5FD_class_value_t" => "DV", |
||||
"H5D_chunk_iter_op_t" => "x", |
||||
"herr_t" => "e", |
||||
"H5E_auto1_t" => "Ea", |
||||
"H5E_auto2_t" => "EA", |
||||
"H5ES_event_complete_func_t" => "EC", |
||||
"H5E_direction_t" => "Ed", |
||||
"H5E_error_t" => "Ee", |
||||
"H5ES_event_insert_func_t" => "EI", |
||||
"H5ES_status_t" => "Es", |
||||
"H5E_type_t" => "Et", |
||||
"H5FD_class_t" => "FC", |
||||
"H5F_close_degree_t" => "Fd", |
||||
"H5F_fspace_strategy_t" => "Ff", |
||||
"H5F_flush_cb_t" => "FF", |
||||
"H5F_info2_t" => "FI", |
||||
"H5F_mem_t" => "Fm", |
||||
"H5F_scope_t" => "Fs", |
||||
"H5F_file_space_type_t" => "Ft", |
||||
"H5F_libver_t" => "Fv", |
||||
"H5G_iterate_t" => "Gi", |
||||
"H5G_obj_t" => "Go", |
||||
"H5G_stat_t" => "Gs", |
||||
"hsize_t" => "h", |
||||
"H5_atclose_func_t" => "Hc", |
||||
"hssize_t" => "Hs", |
||||
"H5E_major_t" => "i", # H5E_major_t is typedef'd to hid_t |
||||
"H5E_minor_t" => "i", # H5E_minor_t is typedef'd to hid_t |
||||
"hid_t" => "i", |
||||
"H5I_future_discard_func_t" => "ID", |
||||
"H5I_free_t" => "If", |
||||
"H5_index_t" => "Ii", |
||||
"H5I_iterate_func_t" => "II", |
||||
"H5_iter_order_t" => "Io", |
||||
"H5FD_subfiling_ioc_select_t" => "IO", |
||||
"H5I_future_realize_func_t" => "IR", |
||||
"int" => "Is", |
||||
"int32_t" => "Is", |
||||
"H5I_search_func_t" => "IS", |
||||
"H5I_type_t" => "It", |
||||
"unsigned" => "Iu", |
||||
"unsigned int" => "Iu", |
||||
"uint32_t" => "Iu", |
||||
"H5O_token_t" => "k", |
||||
"H5L_iterate1_t" => "Li", |
||||
"H5L_iterate2_t" => "LI", |
||||
"H5G_link_t" => "Ll", #Same as H5L_type_t now |
||||
"H5L_type_t" => "Ll", |
||||
"H5L_elink_traverse_t" => "Lt", |
||||
"H5MM_allocate_t" => "Ma", |
||||
"MPI_Comm" => "Mc", |
||||
"H5MM_free_t" => "Mf", |
||||
"MPI_Info" => "Mi", |
||||
"H5M_iterate_t" => 'MI', |
||||
"H5FD_mem_t" => "Mt", |
||||
"off_t" => "o", |
||||
"H5O_iterate1_t" => "Oi", |
||||
"H5O_iterate2_t" => "OI", |
||||
"H5O_mcdt_search_cb_t" => "Os", |
||||
"H5O_type_t" => "Ot", |
||||
"H5P_class_t" => "p", |
||||
"H5P_cls_create_func_t" => "Pc", |
||||
"H5P_prp_create_func_t" => "PC", |
||||
"H5P_prp_delete_func_t" => "PD", |
||||
"H5P_prp_get_func_t" => "PG", |
||||
"H5P_iterate_t" => "Pi", |
||||
"H5P_cls_close_func_t" => "Pl", |
||||
"H5P_prp_close_func_t" => "PL", |
||||
"H5P_prp_compare_func_t" => "PM", |
||||
"H5P_cls_copy_func_t" => "Po", |
||||
"H5P_prp_copy_func_t" => "PO", |
||||
"H5P_prp_set_func_t" => "PS", |
||||
"hdset_reg_ref_t" => "Rd", |
||||
"hobj_ref_t" => "Ro", |
||||
"H5R_ref_t" => "Rr", |
||||
"H5R_type_t" => "Rt", |
||||
"char" => "s", |
||||
"unsigned char" => "s", |
||||
"H5S_class_t" => "Sc", |
||||
"H5S_seloper_t" => "Ss", |
||||
"H5S_sel_type" => "St", |
||||
"htri_t" => "t", |
||||
"H5T_cset_t", => "Tc", |
||||
"H5T_conv_t" => "TC", |
||||
"H5T_direction_t", => "Td", |
||||
"H5T_pers_t" => "Te", |
||||
"H5T_conv_except_func_t" => "TE", |
||||
"H5T_norm_t" => "Tn", |
||||
"H5T_order_t" => "To", |
||||
"H5T_pad_t" => "Tp", |
||||
"H5T_sign_t" => "Ts", |
||||
"H5T_class_t" => "Tt", |
||||
"H5T_str_t" => "Tz", |
||||
"unsigned long" => "Ul", |
||||
"unsigned long long" => "UL", |
||||
"uint64_t" => "UL", |
||||
"H5VL_attr_get_t" => "Va", |
||||
"H5VL_blob_optional_t" => "VA", |
||||
"H5VL_attr_specific_t" => "Vb", |
||||
"H5VL_blob_specific_t" => "VB", |
||||
"H5VL_dataset_get_t" => "Vc", |
||||
"H5VL_class_value_t" => "VC", |
||||
"H5VL_dataset_specific_t" => "Vd", |
||||
"H5VL_datatype_get_t" => "Ve", |
||||
"H5VL_datatype_specific_t" => "Vf", |
||||
"H5VL_file_get_t" => "Vg", |
||||
"H5VL_file_specific_t" => "Vh", |
||||
"H5VL_group_get_t" => "Vi", |
||||
"H5VL_group_specific_t" => "Vj", |
||||
"H5VL_link_create_t" => "Vk", |
||||
"H5VL_link_get_t" => "Vl", |
||||
"H5VL_get_conn_lvl_t" => "VL", |
||||
"H5VL_link_specific_t" => "Vm", |
||||
"H5VL_object_get_t" => "Vn", |
||||
"H5VL_request_notify_t" => "VN", |
||||
"H5VL_object_specific_t" => "Vo", |
||||
"H5VL_request_specific_t" => "Vr", |
||||
"H5VL_attr_optional_t" => "Vs", |
||||
"H5VL_subclass_t" => "VS", |
||||
"H5VL_dataset_optional_t" => "Vt", |
||||
"H5VL_datatype_optional_t" => "Vu", |
||||
"H5VL_file_optional_t" => "Vv", |
||||
"H5VL_group_optional_t" => "Vw", |
||||
"H5VL_link_optional_t" => "Vx", |
||||
"H5VL_object_optional_t" => "Vy", |
||||
"H5VL_request_optional_t" => "Vz", |
||||
"va_list" => "x", |
||||
"void" => "x", |
||||
"size_t" => "z", |
||||
"H5Z_SO_scale_type_t" => "Za", |
||||
"H5Z_class_t" => "Zc", |
||||
"H5Z_EDC_t" => "Ze", |
||||
"H5Z_filter_t" => "Zf", |
||||
"H5Z_filter_func_t" => "ZF", |
||||
"ssize_t" => "Zs", |
||||
|
||||
# Types below must be defined here, as they appear in function arguments, |
||||
# but they are not yet supported in the H5_trace_args() routine yet. If |
||||
# they are used as an actual parameter type (and not just as a pointer to |
||||
# to the type), they must have a "real" abbreviation added (like the ones |
||||
# above), moved to the section of entries above, and support for displaying |
||||
# the type must be added to H5_trace_args(). |
||||
"H5ES_err_info_t" => "#", |
||||
"H5FD_t" => "#", |
||||
"H5FD_hdfs_fapl_t" => "#", |
||||
"H5FD_mirror_fapl_t" => "#", |
||||
"H5FD_onion_fapl_t" => "#", |
||||
"H5FD_ros3_fapl_t" => "#", |
||||
"H5FD_splitter_vfd_config_t" => "#", |
||||
"H5L_class_t" => "#", |
||||
"H5VL_class_t" => "#", |
||||
"H5VL_loc_params_t" => "#", |
||||
"H5VL_request_status_t" => "#", |
||||
); |
||||
|
||||
|
||||
############################################################################## |
||||
# Maximum length of H5TRACE macro line |
||||
# If the ColumnLimit in .clang-format is changed, this value will need to be updated |
||||
# |
||||
my $max_trace_macro_line_len = 110; |
||||
|
||||
|
||||
############################################################################## |
||||
# Print an error message. |
||||
# |
||||
my $found_errors = 0; |
||||
|
||||
sub errmesg ($$@) { |
||||
my ($file, $func, @mesg) = @_; |
||||
my ($mesg) = join "", @mesg; |
||||
my ($lineno) = 1; |
||||
if ($Source =~ /(.*?\n)($func)/s) { |
||||
local $_ = $1; |
||||
$lineno = tr/\n/\n/; |
||||
} |
||||
|
||||
$found_errors = 1; |
||||
|
||||
print "$file: in function \`$func\':\n"; |
||||
print "$file:$lineno: $mesg\n"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Given a C data type return the type string that goes with it. |
||||
# |
||||
sub argstring ($$$) { |
||||
my ($file, $func, $atype) = @_; |
||||
my ($ptr, $tstr, $array) = (0, "!", ""); |
||||
my ($fq_atype); |
||||
|
||||
# Normalize the data type by removing redundant white space, |
||||
# certain type qualifiers, and indirection. |
||||
$atype =~ s/^\bconst\b//; # Leading const |
||||
$atype =~ s/\s*const\s*//; # const after type, possibly in the middle of '*'s |
||||
$atype =~ s/^\bstatic\b//; |
||||
$atype =~ s/\bH5_ATTR_UNUSED\b//g; |
||||
$atype =~ s/\bH5_ATTR_DEPRECATED_USED\b//g; |
||||
$atype =~ s/\bH5_ATTR_NDEBUG_UNUSED\b//g; |
||||
$atype =~ s/\bH5_ATTR_DEBUG_API_USED\b//g; |
||||
$atype =~ s/\bH5_ATTR_PARALLEL_UNUSED\b//g; |
||||
$atype =~ s/\bH5_ATTR_PARALLEL_USED\b//g; |
||||
$atype =~ s/\s+/ /g; |
||||
$ptr = length $1 if $atype =~ s/(\*+)//; |
||||
$atype =~ s/^\s+//; |
||||
$atype =~ s/\s+$//; |
||||
if ($atype =~ /(.*)\[(.*)\]$/) { |
||||
($array, $atype) = ($2, $1); |
||||
$atype =~ s/\s+$//; |
||||
} |
||||
$fq_atype = $atype . ('*' x $ptr); |
||||
|
||||
if ($ptr>0 && exists $TypeString{$fq_atype}) { |
||||
$ptr = 0; |
||||
$tstr = $TypeString{$fq_atype}; |
||||
} elsif ($ptr>0 && exists $TypeString{"$atype*"}) { |
||||
--$ptr; |
||||
$tstr = $TypeString{"$atype*"}; |
||||
} elsif (!exists $TypeString{$atype}) { |
||||
# Defer throwing error until type is actually used |
||||
# errmesg $file, $func, "untraceable type \`$atype", '*'x$ptr, "\'"; |
||||
} else { |
||||
$tstr = $TypeString{$atype}; |
||||
} |
||||
return ("*" x $ptr) . ($array ? "[$array]" : "") . $tstr; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Given information about an API function, rewrite that function with |
||||
# updated tracing information. |
||||
# |
||||
my $file_api = 0; |
||||
my $file_args = 0; |
||||
my $total_api = 0; |
||||
my $total_args = 0; |
||||
sub rewrite_func ($$$$$) { |
||||
my ($file, $type, $name, $args, $body) = @_; |
||||
my ($arg, $trace, $argtrace); |
||||
my (@arg_name, @arg_str, @arg_type); |
||||
local $_; |
||||
|
||||
# Keep copy of original arguments |
||||
my $orig_args = $args; |
||||
|
||||
# Parse return value |
||||
my $rettype = argstring $file, $name, $type; |
||||
|
||||
# Parse arguments |
||||
if ($args eq "void") { |
||||
$trace = "H5TRACE0(\"$rettype\", \"\");\n"; |
||||
$argtrace = "H5ARG_TRACE0(\"\")"; |
||||
} else { |
||||
# Split arguments. First convert `/*in,out*/' to get rid of the |
||||
# comma and remove lines beginning with a '#', then split the arguments |
||||
# on commas. |
||||
$args =~ s/(\/\*\s*in),\s*(out\s*\*\/)/$1_$2/g; # Get rid of comma in 'in,out' |
||||
$args =~ s/H5FL_TRACK_PARAMS//g; # Remove free list macro |
||||
$args =~ s/\n#.*?\n/\n/g; # Remove lines beginning with '#' |
||||
my @args = split /,[\s\n]*/, $args; |
||||
my $argno = 0; |
||||
my %names; |
||||
|
||||
for $arg (@args) { |
||||
if($arg=~/\w*\.{3}\w*/){ # Skip "..." for varargs parameter |
||||
next; |
||||
} |
||||
unless ($arg=~/^((\s*[a-z_A-Z](\w|\*)*\s+)+(\s*\*\s*|\s*const\s*|\s*volatile\s*)*) |
||||
([a-z_A-Z]\w*)(\[.*?\])? |
||||
(\s*\/\*\s*(in|out|in_out)\s*\*\/)?\s*$/x) { |
||||
errmesg $file, $name, "unable to parse \`$arg\'"; |
||||
goto error; |
||||
} else { |
||||
my ($atype, $aname, $array, $adir) = ($1, $5, $6, $8); |
||||
$names{$aname} = $argno++; |
||||
$adir ||= "in"; |
||||
$atype =~ s/\s+$//; |
||||
push @arg_name, $aname; |
||||
push @arg_type, $atype; |
||||
|
||||
if ($adir eq "out") { |
||||
push @arg_str, "x"; |
||||
} else { |
||||
if (defined $array) { |
||||
$atype .= "*"; |
||||
if ($array =~ /^\[\/\*([a-z_A-Z]\w*)\*\/\]$/) { |
||||
my $asize = $1; |
||||
if (exists $names{$asize}) { |
||||
$atype .= '[a' . $names{$asize} . ']'; |
||||
} else { |
||||
warn "bad array size: $asize"; |
||||
$atype .= "*"; |
||||
} |
||||
} |
||||
} |
||||
push @arg_str, argstring $file, $name, $atype; |
||||
} |
||||
} |
||||
} |
||||
|
||||
# Compose the trace macro |
||||
$trace = "H5TRACE" . scalar(@arg_str) . "(\"$rettype\", \""; |
||||
$argtrace = "H5ARG_TRACE" . scalar(@arg_str) . "(__func__, \""; |
||||
$trace .= join("", @arg_str) . "\""; |
||||
$argtrace .= join("", @arg_str) . "\""; |
||||
|
||||
# Add 4 for indenting the line |
||||
my $len = 4 + length($trace); |
||||
|
||||
for my $i (0 .. $#arg_name) { |
||||
# Handle wrapping |
||||
|
||||
# Be VERY careful here! clang-format and this script MUST agree |
||||
# on which lines get wrapped or there will be churn as each tries |
||||
# to undo the other's output. |
||||
# |
||||
# TWO cases must be handled: |
||||
# 1) The argument is that last one and ');' will be appended |
||||
# 2) The argument is NOT the last one and ',' will be appended |
||||
# |
||||
# NB: clang-format does NOT consider terminal newlines when |
||||
# counting columns for the ColumnLimit |
||||
# |
||||
# The extra '2' added after $len includes the ', ' that would be |
||||
# added BEFORE the argument. |
||||
# |
||||
my $adjust = ($i + 1 == scalar(@arg_str)) ? 2 : 1; |
||||
my $len_if_added = $len + 2 + length($arg_name[$i]) + $adjust; |
||||
|
||||
# Wrap lines that will be longer than the limit |
||||
if ($len_if_added > $max_trace_macro_line_len) { |
||||
# Wrap line, with indentation |
||||
$trace .= ",\n "; |
||||
$len = 13; # Set to 13, for indentation |
||||
|
||||
# Indent an extra space to account for extra digit in 'H5TRACE' macro |
||||
if (scalar(@arg_str) >= 10) { |
||||
$trace .= " "; |
||||
$len++; |
||||
} |
||||
} else { |
||||
$trace .= ", "; |
||||
$len += 2; # Add 2, for ', ' |
||||
} |
||||
|
||||
# Append argument |
||||
$trace .= "$arg_name[$i]"; |
||||
$argtrace .= ", $arg_name[$i]"; |
||||
|
||||
# Add length of appended argument name |
||||
$len += length($arg_name[$i]); |
||||
} |
||||
|
||||
# Append final ');' for macro |
||||
$trace .= ");\n"; |
||||
$argtrace .= ")"; |
||||
} |
||||
|
||||
# Check for API / non-API routine name |
||||
if( $name =~ /H5[A-Z]{0,2}[a-z].*/) { |
||||
# The H5TRACE() statement, for API routines |
||||
if ($body =~ /\/\*[ \t]*NO[ \t]*TRACE[ \t]*\*\//) { |
||||
# Ignored due to NO TRACE comment. |
||||
} else { |
||||
# Check for known, but unsupported type |
||||
if ( $trace =~ /(^#)|([^*]#)/ ) { |
||||
# Check for unsupported return type |
||||
if ( $type =~ /(^#)|([^*]#)/ ) { |
||||
errmesg $file, $name, "unsupported type in return type\nAdd to TypeString hash in trace script and update H5_trace_args()"; |
||||
print "type = '$type'\n"; |
||||
} |
||||
|
||||
# Check for unsupported argument type |
||||
$index = 0; |
||||
for (@arg_str) { |
||||
if ( $_ =~ /(^#)|([^*]#)/ ) { |
||||
errmesg $file, $name, "unsupported type in args\nAdd to TypeString hash in trace script and update H5_trace_args()"; |
||||
print "type = $arg_type[$index]\n"; |
||||
} |
||||
$index++; |
||||
} |
||||
goto error; |
||||
} |
||||
|
||||
# Check for unknown (and therefore unsupported) type |
||||
if ( $trace =~ /(^!)|([^*]!)/ ) { |
||||
# Check for unsupported return type |
||||
if ( $type =~ /(^!)|([^*]!)/ ) { |
||||
errmesg $file, $name, "unknown type in return type\nAdd to TypeString hash in trace script and also update H5_trace_args() if used by value"; |
||||
print "type = '$type'\n"; |
||||
} |
||||
|
||||
# Check for unsupported argument type |
||||
$index = 0; |
||||
for (@arg_str) { |
||||
if ( $_ =~ /(^!)|([^*]!)/ ) { |
||||
errmesg $file, $name, "unknown type in args\nAdd to TypeString hash in trace script and also update H5_trace_args() if used by value"; |
||||
print "type = $arg_type[$index]\n"; |
||||
} |
||||
$index++; |
||||
} |
||||
goto error; |
||||
} |
||||
|
||||
if ($body =~ s/((\n[ \t]*)H5TRACE\d+\s*\(.*?\);)\n/"$2$trace"/es) { |
||||
# Replaced an H5TRACE macro. |
||||
} elsif ($body=~s/((\n[ \t]*)FUNC_ENTER\w*[ \t]*(\(.*?\))?;??)\n/"$1$2$trace"/es) { |
||||
# Added an H5TRACE macro after a FUNC_ENTER macro. |
||||
} else { |
||||
errmesg $file, $name, "unable to insert tracing information"; |
||||
print "body = ", $body, "\n"; |
||||
goto error; |
||||
} |
||||
} |
||||
|
||||
#Increment # of API routines modified |
||||
$file_api++; |
||||
} |
||||
|
||||
# Check for H5ARG_TRACE macros in non-API routines |
||||
if ( $body =~ /H5ARG_TRACE/ ) { |
||||
# Check for untraceable type (deferred until $argtrace used) |
||||
if ( $argtrace =~ /(^!)|([^*]!)/ ) { |
||||
errmesg $file, $name, "untraceable type in args"; |
||||
print "args = '$orig_args'\n"; |
||||
goto error; |
||||
} |
||||
|
||||
# Replace / update H5ARG_TRACE macro. |
||||
$body =~ s/(H5ARG_TRACE(\d+\s*\(.*?\))?)/"$argtrace"/esg; |
||||
|
||||
#Increment # of non-API routines modified |
||||
$file_args++; |
||||
} |
||||
|
||||
error: |
||||
return "\n$type\n$name($orig_args)\n$body"; |
||||
} |
||||
|
||||
############################################################################## |
||||
# Process each source file, rewriting API functions with updated |
||||
# tracing information. |
||||
# |
||||
for $file (@ARGV) { |
||||
$file_api = 0; |
||||
$file_args = 0; |
||||
|
||||
# Ignore some files that do not need tracing macros |
||||
unless ($file eq "H5FDmulti.c" or $file eq "src/H5FDmulti.c" or $file eq "H5FDstdio.c" or $file eq "src/H5FDstdio.c" or $file eq "src/H5TS.c" or $file eq "src/H5FDperform.c") { |
||||
|
||||
# Snarf up the entire file |
||||
open SOURCE, $file or die "$file: $!\n"; |
||||
$Source = join "", <SOURCE>; |
||||
close SOURCE; |
||||
|
||||
# Make a copy of the original data |
||||
my $original = $Source; |
||||
|
||||
# Make modifications |
||||
$Source =~ s/\n([A-Za-z]\w*(\s+[A-Za-z]\w*)*\s*\**)\n #type |
||||
(H5[A-Z]{0,2}_?[a-zA-Z0-9_]\w*) #name |
||||
\s*\((.*?)\)\s* #args |
||||
(\{.*?\n\}[^\n]*) #body |
||||
/rewrite_func($file,$1,$3,$4,$5)/segx; |
||||
|
||||
# If the source changed then print out the new version |
||||
if ($original ne $Source) { |
||||
printf "%s: instrumented %d API function%s and %d argument list%s\n", |
||||
$file, $file_api, (1 == $file_api ? "" : "s"), |
||||
$file_args, (1 == $file_args ? "" : "s"); |
||||
rename $file, "$file~" or die "unable to make backup"; |
||||
open SOURCE, ">$file" or die "unable to modify source"; |
||||
print SOURCE $Source; |
||||
close SOURCE; |
||||
|
||||
$total_api += $file_api; |
||||
$total_args += $file_args; |
||||
} |
||||
} |
||||
} |
||||
|
||||
if ($found_errors eq 1) { |
||||
printf "\n"; |
||||
printf "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!\n"; |
||||
printf "*** ERRORS FOUND *** ERRORS FOUND *** ERRORS FOUND ****\n"; |
||||
printf "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!\n"; |
||||
exit 1; |
||||
} else { |
||||
printf "Finished processing HDF5 API calls:\n"; |
||||
printf "\tinstrumented %d API function%s and %d argument list%s\n", |
||||
$total_api, (1 == $total_api ? "" : "s"), |
||||
$total_args, (1 == $total_args ? "" : "s"); |
||||
} |
||||
|
||||
@ -0,0 +1,549 @@ |
||||
#!/usr/bin/env perl |
||||
require 5.003; |
||||
use warnings; |
||||
|
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
# Quincey Koziol |
||||
# 9 Aug 2013 |
||||
# |
||||
# Purpose: Given an input file containing the output from a build of the |
||||
# library, gather the file names and line numbers, alias |
||||
# identical types of warnings together into a single bin and |
||||
# report the number of warnings for each type of warning, each file |
||||
# and the total count of warnings |
||||
|
||||
# Perl modules/settings |
||||
use strict; |
||||
use Getopt::Std; |
||||
|
||||
# Global variables, for accumulating information |
||||
my $totalcount = 0; |
||||
my $notecount = 0; |
||||
my $dupcount = 0; |
||||
my %warn_count = (); |
||||
my $warncount; |
||||
my %warn_file = (); |
||||
my %warn_file_line = (); |
||||
my %warn_file_line_offset = (); |
||||
my %file_count = (); |
||||
my $filecount; |
||||
my $ignorecount = 0; |
||||
my @ignorenames; |
||||
my %ignored_files = (); |
||||
my %warn_file_indices = (); |
||||
my %file_warn_indices = (); |
||||
my @warn_match_strings; |
||||
my @file_match_strings; |
||||
my %file_warn = (); |
||||
my %file_warn_line = (); |
||||
my $current_warning = 0; |
||||
my $current_file = 0; |
||||
my $warn_index; |
||||
my $genericize = 1; |
||||
|
||||
# Info about last name / line / offset for file |
||||
my $last_c_name; |
||||
my $last_fort_name; |
||||
my $last_fort_line; |
||||
my $last_fort_offset; |
||||
|
||||
# Display usage |
||||
sub do_help { |
||||
print "Usage: 'warnhist [-h, --help] [-t <prefix>] [-w <n>] [-W] [-f <n>] [-F] [-s <warning string list>] [-S <file string list] [-l] [-u] [-i <name list>] [file]'\n"; |
||||
print "\t-h, --help\tDisplay this usage\n"; |
||||
print "\t-t <prefix>\tTrim pathname prefix from filenames, <prefix>\n"; |
||||
print "\t-w <n>\tDisplay files for a given warning index list, <n>\n"; |
||||
print "\t\t<n> can be a single value, a range, or a comma separated list\n"; |
||||
print "\t\tFor example: '0' or '0,4' or '8-10' or '0,2-4,8-10,13'\n"; |
||||
print "\t-W\tDisplay files for all warnings\n"; |
||||
print "\t-f <n>\tDisplay warnings for a given file index list, <n>\n"; |
||||
print "\t\t<n> can be a single value, a range, or a comma separated list\n"; |
||||
print "\t\tFor example: '0' or '0,4' or '8-10' or '0,2-4,8-10,13'\n"; |
||||
print "\t-F\tDisplay warnings for all files\n"; |
||||
print "\t-s <warning string list>\tDisplay files for warnings which contain a string, <warning string list>\n"; |
||||
print "\t\t<warning string list> is a comma separated list, with no spaces\n"; |
||||
print "\t\tFor example: 'Wunused-dummy-argument' or 'Wunused-dummy-argument,Wunused-variable'\n"; |
||||
print "\t-S <file string list>\tDisplay warnings for files which contain a string, <file string list>\n"; |
||||
print "\t\t<file string list> is a comma separated list, with no spaces\n"; |
||||
print "\t\tFor example: 'H5Fint' or 'H5Fint,H5Gnode'\n"; |
||||
print "\t-l\tDisplay line numbers for file/warning\n"; |
||||
print "\t-u\tLeave 'unique' types in warnings, instead of genericizing them\n"; |
||||
print "\t-i <name list>\tIgnore named files, <name list>\n"; |
||||
print "\t\t<name list> is a comma separated list, with no spaces\n"; |
||||
print "\t\tFor example: 'H5LTparse' or 'H5LTparse,H5LTanalyze'\n"; |
||||
print "\tfile\tFilename containing build output\n"; |
||||
print "\t\tIf no file is given, standard input is used.\n"; |
||||
exit; |
||||
} |
||||
|
||||
sub main::HELP_MESSAGE { |
||||
do_help(); |
||||
} |
||||
|
||||
# declare the Perl command line flags/options we want to allow |
||||
my %options=(); |
||||
getopts("FWhut:w:f:s:S:i:l", \%options); |
||||
|
||||
# Display usage, if requested |
||||
if($options{h}) { |
||||
do_help(); |
||||
} |
||||
|
||||
# Parse list of file names to ignore |
||||
if(exists $options{i}) { |
||||
@ignorenames = split /,/, $options{i}; |
||||
#print STDERR @ignorenames; |
||||
} |
||||
|
||||
# Parse list of warning indices to expand file names |
||||
if(exists $options{w}) { |
||||
my @tmp_indices; |
||||
|
||||
@tmp_indices = split /,/, $options{w}; |
||||
#print STDERR @tmp_indices; |
||||
for my $x (@tmp_indices) { |
||||
#print STDERR "x = '$x'\n"; |
||||
if($x =~ /\-/) { |
||||
my $start_index; |
||||
my $end_index; |
||||
|
||||
#print STDERR "matched = '$x'\n"; |
||||
($start_index, $end_index) = split /\-/, $x; |
||||
#print STDERR "start_index = '$start_index', end_index = '$end_index'\n"; |
||||
for my $y ($start_index..$end_index) { |
||||
#print STDERR "y = '$y'\n"; |
||||
if(!exists $warn_file_indices{$y}) { |
||||
$warn_file_indices{$y} = $y; |
||||
} |
||||
} |
||||
} |
||||
else { |
||||
if(!exists $warn_file_indices{$x}) { |
||||
$warn_file_indices{$x} = $x; |
||||
} |
||||
} |
||||
} |
||||
#foreach (sort keys %warn_file_indices) { |
||||
# print STDERR "$_ : $warn_file_indices{$_}\n"; |
||||
#} |
||||
} |
||||
|
||||
# Parse list of warning strings to expand file names |
||||
if(exists $options{s}) { |
||||
@warn_match_strings = split /,/, $options{s}; |
||||
# print STDERR @warn_match_strings; |
||||
} |
||||
|
||||
# Parse list of file indices to expand warnings |
||||
if(exists $options{f}) { |
||||
my @tmp_indices; |
||||
|
||||
@tmp_indices = split /,/, $options{f}; |
||||
#print STDERR @tmp_indices; |
||||
for my $x (@tmp_indices) { |
||||
#print STDERR "x = '$x'\n"; |
||||
if($x =~ /\-/) { |
||||
my $start_index; |
||||
my $end_index; |
||||
|
||||
#print STDERR "matched = '$x'\n"; |
||||
($start_index, $end_index) = split /\-/, $x; |
||||
#print STDERR "start_index = '$start_index', end_index = '$end_index'\n"; |
||||
for my $y ($start_index..$end_index) { |
||||
#print STDERR "y = '$y'\n"; |
||||
if(!exists $file_warn_indices{$y}) { |
||||
$file_warn_indices{$y} = $y; |
||||
} |
||||
} |
||||
} |
||||
else { |
||||
if(!exists $file_warn_indices{$x}) { |
||||
$file_warn_indices{$x} = $x; |
||||
} |
||||
} |
||||
} |
||||
#foreach (sort keys %warn_file_indices) { |
||||
# print STDERR "$_ : $warn_file_indices{$_}\n"; |
||||
#} |
||||
} |
||||
|
||||
# Parse list of warning strings for files to expand warnings |
||||
if(exists $options{S}) { |
||||
@file_match_strings = split /,/, $options{S}; |
||||
# print STDERR @file_match_strings; |
||||
} |
||||
|
||||
# Check if warnings should stay unique and not be "genericized" |
||||
if($options{u}) { |
||||
$genericize = 0; |
||||
} |
||||
|
||||
PARSE_LINES: |
||||
while (<>) { |
||||
my $name; |
||||
my $line; |
||||
my $prev_line; |
||||
my $toss; |
||||
my $offset; |
||||
my $warning; |
||||
my $extra; |
||||
my $extra2; |
||||
|
||||
# Retain last FORTRAN compile line, which comes a few lines before warning |
||||
if($_ =~ /.*\.[fF]90:.*/) { |
||||
($last_fort_name, $last_fort_line, $last_fort_offset) = split /\:/, $_; |
||||
($last_fort_line, $toss) = split /\./, $last_fort_line; |
||||
} |
||||
|
||||
# Retain last C/C++ compile line, which possibly comes a few lines before warning |
||||
if($_ =~ /.*[A-Za-z0-9_]\.[cC]:.*/) { |
||||
($last_c_name, $toss) = split /\:/, $_; |
||||
} |
||||
|
||||
# Retain C/C++ compile line, which comes with the line of warning |
||||
if($_ =~ /.*[A-Za-z0-9_]\.[chC]\(.*[0-9]\):.*#.*/) { |
||||
$last_c_name = $_; |
||||
} |
||||
|
||||
# Skip lines that don't have the word "warning" |
||||
next if $_ !~ /[Ww]arning/; |
||||
|
||||
# Skip warnings from linker |
||||
next if $_ =~ /ld: warning:/; |
||||
|
||||
# Skip warnings from build_py and install_lib |
||||
next if $_ =~ /warning: (build_py|install_lib)/; |
||||
|
||||
# Skip variables with the word 'warning' in them |
||||
next if $_ =~ /_warning_/; |
||||
|
||||
# Skip AMD Optimizing Compiler (aocc) lines "<#> warning(s) generated." |
||||
next if $_ =~ / warnings? generated\./; |
||||
|
||||
# "Hide" the C++ '::' symbol until we've parsed out the parts of the line |
||||
while($_ =~ /\:\:/) { |
||||
$_ =~ s/\:\:/@@@@/g; |
||||
} |
||||
|
||||
# Check for weird formatting of warning message |
||||
$line = "??"; |
||||
$offset = "??"; |
||||
if($_ =~ /^cc1: warning:.*/) { |
||||
$name = $last_c_name; |
||||
($toss, $toss, $warning, $extra, $extra2) = split /\:/, $_; |
||||
# Check for CMAKE build with warning on first line and no filename |
||||
} elsif($_ =~ /^\s*[Ww]arning:.*/) { |
||||
$name = $last_c_name; |
||||
($toss, $warning, $extra, $extra2) = split /\:/, $_; |
||||
# Check for file-scope gcc Fortran warning output |
||||
} elsif($_ =~ /f\d\d\d: Warning:/) { |
||||
# These are interspersed with the "compiling a file" output |
||||
# when compiling with `make -j` and thus difficult to tie to |
||||
# any particular file. They are due to things like inappropriate |
||||
# build options and don't have a line number. |
||||
# |
||||
# They start with f, as in f951 |
||||
$name = "(generic)"; |
||||
$line = int(rand(1000000)); # Hack to avoid counting as duplictates |
||||
|
||||
($warning) = $_ =~ /\[(.*)\]/x; |
||||
# Check for FORTRAN warning output |
||||
} elsif($_ =~ /^Warning:.*/) { |
||||
$name = $last_fort_name; |
||||
$line = $last_fort_line; |
||||
$offset = $last_fort_offset; |
||||
($toss, $warning, $extra, $extra2) = split /\:/, $_; |
||||
|
||||
# Check for improperly parsed filename or line |
||||
if($name =~ /^$/) { |
||||
print "Filename is a null string! Input line #$. is: '$_'"; |
||||
next |
||||
} |
||||
if($line =~ /^$/) { |
||||
print "Line is a null string! Input line #$. is: '$_'"; |
||||
next |
||||
} |
||||
# Check for non-GCC warning (Solaris/Oracle?) |
||||
} elsif($_ =~ /^\".*, line [0-9]+: *[Ww]arning:.*/) { |
||||
($name, $toss, $warning, $extra, $extra2) = split /\:/, $_; |
||||
($name, $line) = split /\,/, $name; |
||||
$name =~ s/^\"//g; |
||||
$name =~ s/\"$//g; |
||||
$line =~ s/^\s*line\s*//g; |
||||
# Check for Intel icc warning |
||||
} elsif($_ =~ /.*[A-Za-z0-9_]\.[chC]\(.*[0-9]\):.*#.*/) { |
||||
($last_c_name, $toss, $warning) = split /\:/, $last_c_name; |
||||
($name, $line) = split /\(/, $last_c_name; |
||||
$line =~ s/\)//g; |
||||
} else { |
||||
# Check for 'character offset' field appended to file & line # |
||||
# (This is probably specific to GCC) |
||||
if($_ =~ /^.*[0-9]+\:[0-9]+\:/) { |
||||
($name, $line, $offset, $toss, $warning, $extra, $extra2) = split /\:/, $_; |
||||
} else { |
||||
($name, $line, $toss, $warning, $extra, $extra2) = split /\:/, $_; |
||||
} |
||||
} |
||||
|
||||
# Check for extra ':' followed by more text in original warning string, |
||||
# and append the ':' and text back onto the parsed warning |
||||
# (Use 'length $extra' idiom to avoid warning when $extra is undefined) |
||||
if(length $extra ) { |
||||
$warning = join ':', $warning, $extra; |
||||
} |
||||
if(length $extra2 ) { |
||||
$warning = join ':', $warning, $extra2; |
||||
} |
||||
|
||||
# Restore the C++ '::' symbol now that we've parsed out the parts of the line |
||||
while($warning =~ /@@@@/) { |
||||
$warning =~ s/@@@@/\:\:/g; |
||||
} |
||||
|
||||
# Trim leading '..' paths from filename |
||||
while($name =~ /^\.\.\//) { |
||||
$name =~ s/^\.\.\///g; |
||||
} |
||||
|
||||
# Check for trimming prefix |
||||
if((exists $options{t}) && ($name =~ /$options{t}/)) { |
||||
$name =~ s/^$options{t}\///g; |
||||
} |
||||
|
||||
# Check for ignored file |
||||
if(exists $options{i}) { |
||||
for my $x (@ignorenames) { |
||||
if($name =~ /$x/) { |
||||
$ignorecount++; |
||||
if(!(exists $ignored_files{$name})) { |
||||
$ignored_files{$name} = $name; |
||||
} |
||||
next PARSE_LINES; |
||||
} |
||||
} |
||||
} |
||||
|
||||
# Check for improperly parsed warning (usually an undefined warning string) |
||||
if(!defined $warning) { |
||||
print "Warning Undefined! Input line is: '$_'"; |
||||
next |
||||
} |
||||
|
||||
# Get rid of leading & trailing whitespace |
||||
$warning =~ s/^\s//g; |
||||
$warning =~ s/\s$//g; |
||||
|
||||
# Check for improperly parsed warning |
||||
if($warning =~ /^$/) { |
||||
print "Warning is a null string! Input line is: '$_'"; |
||||
next |
||||
} |
||||
|
||||
# Convert all quotes to ' |
||||
$warning =~ s/‘/'/g; |
||||
$warning =~ s/’/'/g; |
||||
$warning =~ s/"/'/g; |
||||
|
||||
# |
||||
# These skipped messages & "genericizations" may be specific to GCC |
||||
|
||||
# Skip supplemental warning message |
||||
if($warning =~ /near initialization for/) { |
||||
$notecount++; |
||||
next |
||||
} |
||||
|
||||
# Skip C++ supplemental warning message |
||||
if($warning =~ /in call to/) { |
||||
$notecount++; |
||||
next |
||||
} |
||||
|
||||
# Skip GCC warning that should be a note |
||||
if($_ =~ /\(this will be reported only once per input file\)/) { |
||||
$notecount++; |
||||
next |
||||
} |
||||
|
||||
if($genericize) { |
||||
# Eliminate C/C++ "{aka <some type>}" and "{aka '<some type>'}" info |
||||
if($warning =~ /\s(\{|\()aka '?[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#]+[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#\ ]*'?(\}|\))/) { |
||||
$warning =~ s/\s(\{|\()aka '?[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#]+[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#\ ]*'?(\}|\))//g; |
||||
} |
||||
|
||||
# Genericize C/C++ '<some type>', printf format '%<some format>', and |
||||
# "unknown warning group" into '-' |
||||
if($warning =~ /'[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#\-\=]+[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#\-\=\ ]*'/) { |
||||
$warning =~ s/'[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#\-\=]+[A-Za-z_0-9\(\)\*\,\[\]\.\<\>\&\:\+\#\-\=\ ]*'/'-'/g; |
||||
} |
||||
if($warning =~ /'%[\#0\-\ \+]*[,;\:_]?[0-9\*]*\.?[0-9\*]*[hjltzL]*[aAcdeEfFgGinosuxX]'/) { |
||||
$warning =~ s/'%[\#0\-\ \+]*[,;\:_]?[0-9\*]*\.?[0-9\*]*[hjltzL]*[aAcdeEfFgGinosuxX]'/'-'/g; |
||||
} |
||||
|
||||
# Genericize C/C++ "<macro>" warnings into "-" |
||||
if($warning =~ /"[A-Za-z_0-9]*"/) { |
||||
$warning =~ s/"[A-Za-z_0-9]*"/"-"/g; |
||||
} |
||||
|
||||
# Genericize [GCC?] C/C++ warning text about suggested attribute |
||||
if($warning =~ /attribute=[A-Za-z_0-9]*\]/) { |
||||
$warning =~ s/=[A-Za-z_0-9]*\]/=-\]/g; |
||||
} |
||||
|
||||
# Genericize FORTRAN "at (<n>)" into "at (-)", "REAL(<n>)" into "REAL(-)", |
||||
# and "INTEGER(<n>)" into "INTEGER(-)" |
||||
if($warning =~ /.*at\s\([0-9]+\).*/) { |
||||
$warning =~ s/at\s\([0-9]+\)/at \(-\)/g; |
||||
} |
||||
if($warning =~ /.*REAL\([0-9]+\).*/) { |
||||
$warning =~ s/REAL\([0-9]+\)/REAL\(-\)/g; |
||||
} |
||||
if($warning =~ /.*INTEGER\([0-9]+\).*/) { |
||||
$warning =~ s/INTEGER\([0-9]+\)/INTEGER\(-\)/g; |
||||
} |
||||
|
||||
# Genericize standalone numbers in warnings |
||||
if($warning =~ /(\s|')-?[0-9]+(\s|')/) { |
||||
$warning =~ s/-?[0-9]+/-/g; |
||||
} |
||||
|
||||
# Genericize unusual GCC/G++/GFORTRAN warnings that aren't handled above |
||||
if($warning =~ /\[deprecation\] [A-Za-z_0-9]*\([A-Za-z_,0-9]*\) in [A-Za-z_0-9]* has been deprecated.*/) { |
||||
$warning =~ s/[A-Za-z_0-9]*\([A-Za-z_,0-9]*\) in [A-Za-z_0-9]*/-\(-\) in -/g; |
||||
} |
||||
} |
||||
# <end possible GCC-specific code> |
||||
|
||||
# Check if we've already seen this warning on this line in this file |
||||
# (Can happen for warnings from inside header files) |
||||
if( !exists $warn_file_line_offset{$warning}{$name}{$line}{$offset} ) { |
||||
# Increment count for [generic] warning |
||||
$warn_count{$warning}++; |
||||
$warn_file{$warning}{$name}++; |
||||
$warn_file_line{$warning}{$name}{$line}++; |
||||
$warn_file_line_offset{$warning}{$name}{$line}{$offset}++; |
||||
|
||||
# Increment count for filename |
||||
$file_count{$name}++; |
||||
$file_warn{$name}{$warning}++; |
||||
$file_warn_line{$name}{$warning}{$line}++; |
||||
|
||||
# Increment total count of warnings |
||||
$totalcount++; |
||||
} |
||||
else { |
||||
# Increment count of duplicate warnings |
||||
$dupcount++; |
||||
} |
||||
|
||||
# print STDERR "name = $name\n"; |
||||
# print STDERR "line = $line\n"; |
||||
# print STDERR "offset = $offset\n"; |
||||
# print STDERR "warning = \"$warning\"\n"; |
||||
} |
||||
|
||||
print "Total unique [non-ignored] warnings: $totalcount\n"; |
||||
print "Ignored notes / supplemental warning lines [not counted in unique warnings]: $notecount\n"; |
||||
print "Duplicated warning lines [not counted in unique warnings]: $dupcount\n"; |
||||
print "Total ignored warnings: $ignorecount\n"; |
||||
$warncount = keys %warn_count; |
||||
print "Total unique kinds of warnings: $warncount\n"; |
||||
$filecount = keys %file_count; |
||||
print "Total files with warnings: $filecount\n\n"; |
||||
|
||||
# Print warnings in decreasing frequency |
||||
print "# of Warnings by frequency (file count)\n"; |
||||
print "=======================================\n"; |
||||
for my $x (sort {$warn_count{$b} <=> $warn_count{$a}} keys(%warn_count)) { |
||||
printf ("[%2d] %4d (%2d) - %s\n", $current_warning++, $warn_count{$x}, scalar(keys %{$warn_file{$x}}), $x); |
||||
if((exists $options{W}) || (exists $options{w}) || (exists $options{s})) { |
||||
my $curr_index = $current_warning - 1; |
||||
my $match = 0; |
||||
|
||||
# Check for string from list in current warning |
||||
if(exists $options{s}) { |
||||
for my $y (@warn_match_strings) { |
||||
# print STDERR "y = '$y'\n"; |
||||
if($x =~ /$y/) { |
||||
# print STDERR "matched warning = '$x'\n"; |
||||
$match = 1; |
||||
last; |
||||
} |
||||
} |
||||
} |
||||
|
||||
# Check if current warning index matches |
||||
if((exists $warn_file_indices{$curr_index}) && $curr_index == $warn_file_indices{$curr_index}) { |
||||
$match = 1; |
||||
} |
||||
|
||||
if($match) { |
||||
for my $y (sort {$warn_file{$x}{$b} <=> $warn_file{$x}{$a}} keys(%{$warn_file{$x}})) { |
||||
printf ("\t%4d - %s\n", $warn_file{$x}{$y}, $y); |
||||
if(exists $options{l}) { |
||||
my $lines = join ", ", sort {$a <=> $b} keys %{$warn_file_line{$x}{$y}}; |
||||
printf("\t\tLines: $lines \n"); |
||||
} |
||||
} |
||||
} |
||||
} |
||||
} |
||||
|
||||
# Print warnings in decreasing frequency, by filename |
||||
print "\n# of Warnings by filename (warning type)\n"; |
||||
print "========================================\n"; |
||||
for my $x (sort {$file_count{$b} <=> $file_count{$a}} keys(%file_count)) { |
||||
printf ("[%3d] %4d (%2d) - %s\n", $current_file++, $file_count{$x}, scalar(keys %{$file_warn{$x}}), $x); |
||||
if((exists $options{F}) || (exists $options{f}) || (exists $options{S})) { |
||||
my $curr_index = $current_file - 1; |
||||
my $match = 0; |
||||
|
||||
# Check for string from list in current file |
||||
if(exists $options{S}) { |
||||
for my $y (@file_match_strings) { |
||||
# print STDERR "y = '$y'\n"; |
||||
if($x =~ /$y/) { |
||||
# print STDERR "matched warning = '$x'\n"; |
||||
$match = 1; |
||||
last; |
||||
} |
||||
} |
||||
} |
||||
|
||||
# Check if current file index matches |
||||
if((exists $file_warn_indices{$curr_index}) && $curr_index == $file_warn_indices{$curr_index}) { |
||||
$match = 1; |
||||
} |
||||
|
||||
if($match) { |
||||
for my $y (sort {$file_warn{$x}{$b} <=> $file_warn{$x}{$a}} keys(%{$file_warn{$x}})) { |
||||
printf ("\t%4d - %s\n", $file_warn{$x}{$y}, $y); |
||||
if(exists $options{l}) { |
||||
my $lines = join ", ", sort {$a <=> $b} keys %{$file_warn_line{$x}{$y}}; |
||||
printf("\t\tLines: $lines \n"); |
||||
} |
||||
} |
||||
} |
||||
} |
||||
} |
||||
|
||||
# Print names of files that were ignored |
||||
# Check for ignored file |
||||
if(exists $options{i}) { |
||||
print "\nIgnored filenames\n"; |
||||
print "=================\n"; |
||||
for my $x (sort keys(%ignored_files)) { |
||||
print "$x\n"; |
||||
} |
||||
} |
||||
|
||||
@ -0,0 +1,18 @@ |
||||
cmake_minimum_required (VERSION 3.18) |
||||
project (HDF5_CPP CXX) |
||||
|
||||
add_subdirectory (src) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Build the CPP Examples |
||||
#----------------------------------------------------------------------------- |
||||
if (HDF5_BUILD_EXAMPLES) |
||||
add_subdirectory (examples) |
||||
endif () |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Build the CPP unit tests |
||||
#----------------------------------------------------------------------------- |
||||
if (BUILD_TESTING) |
||||
add_subdirectory (test) |
||||
endif () |
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,49 @@ |
||||
#
|
||||
# Copyright by The HDF Group.
|
||||
# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF5. The full HDF5 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the COPYING file, which can be found at the root of the source code
|
||||
# distribution tree, or in https://www.hdfgroup.org/licenses.
|
||||
# If you do not have access to either file, you may request a copy from
|
||||
# help@hdfgroup.org.
|
||||
##
|
||||
## Makefile.am
|
||||
## Run automake to generate a Makefile.in from this file.
|
||||
#
|
||||
# Top-level HDF5-C++ Makefile(.in)
|
||||
#
|
||||
|
||||
include $(top_srcdir)/config/commence.am |
||||
|
||||
if BUILD_TESTS_CONDITIONAL |
||||
TEST_DIR = test
|
||||
else |
||||
TEST_DIR=
|
||||
endif |
||||
|
||||
## Only recurse into subdirectories if C++ interface is enabled.
|
||||
if BUILD_CXX_CONDITIONAL |
||||
SUBDIRS=src $(TEST_DIR)
|
||||
|
||||
endif |
||||
DIST_SUBDIRS = src test examples
|
||||
|
||||
# Install examples
|
||||
install-examples uninstall-examples: |
||||
@(cd examples && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1;
|
||||
|
||||
installcheck-local: |
||||
@(cd examples && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1;
|
||||
|
||||
# Clean examples when check-clean is invoked
|
||||
check-clean :: |
||||
@$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1;
|
||||
@for d in X $(SUBDIRS) examples; do \
|
||||
if test $$d != X && test $$d != .; then \
|
||||
(set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \
|
||||
fi; \
|
||||
done
|
||||
|
||||
include $(top_srcdir)/config/conclude.am |
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,87 @@ |
||||
cmake_minimum_required (VERSION 3.18) |
||||
project (HDF5_CPP_EXAMPLES CXX) |
||||
|
||||
# -------------------------------------------------------------------- |
||||
# Notes: When creating examples they should be prefixed |
||||
# with "cpp_ex_". This allows for easier filtering of the examples. |
||||
# -------------------------------------------------------------------- |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Define examples |
||||
#----------------------------------------------------------------------------- |
||||
|
||||
set (examples |
||||
create |
||||
readdata |
||||
writedata |
||||
compound |
||||
extend_ds |
||||
chunks |
||||
h5group |
||||
) |
||||
|
||||
set (tutr_examples |
||||
h5tutr_cmprss |
||||
h5tutr_crtdat |
||||
h5tutr_crtatt |
||||
h5tutr_crtgrpar |
||||
h5tutr_crtgrp |
||||
h5tutr_crtgrpd |
||||
h5tutr_extend |
||||
h5tutr_rdwt |
||||
h5tutr_subset |
||||
) |
||||
|
||||
foreach (example ${examples}) |
||||
add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp) |
||||
target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") |
||||
if (NOT BUILD_SHARED_LIBS) |
||||
TARGET_C_PROPERTIES (cpp_ex_${example} STATIC) |
||||
target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET}) |
||||
else () |
||||
TARGET_C_PROPERTIES (cpp_ex_${example} SHARED) |
||||
target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) |
||||
if (MINGW AND HDF5_MINGW_STATIC_GCC_LIBS) |
||||
target_link_options (${HDF5_CPP_LIBSH_TARGET} |
||||
PRIVATE -static-libgcc -static-libstdc++ |
||||
) |
||||
endif () |
||||
endif () |
||||
set_target_properties (cpp_ex_${example} PROPERTIES FOLDER examples/cpp) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Add Target to clang-format |
||||
#----------------------------------------------------------------------------- |
||||
if (HDF5_ENABLE_FORMATTERS) |
||||
clang_format (HDF5_CPP_EXAMPLES_${example}_FORMAT cpp_ex_${example}) |
||||
endif () |
||||
endforeach () |
||||
|
||||
foreach (example ${tutr_examples}) |
||||
add_executable (cpp_ex_${example} ${HDF5_CPP_EXAMPLES_SOURCE_DIR}/${example}.cpp) |
||||
target_include_directories (cpp_ex_${example} PRIVATE "${HDF5_SRC_INCLUDE_DIRS};${HDF5_SRC_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") |
||||
if (NOT BUILD_SHARED_LIBS) |
||||
TARGET_C_PROPERTIES (cpp_ex_${example} STATIC) |
||||
target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIB_TARGET} ${HDF5_LIB_TARGET}) |
||||
else () |
||||
TARGET_C_PROPERTIES (cpp_ex_${example} SHARED) |
||||
target_link_libraries (cpp_ex_${example} PRIVATE ${HDF5_CPP_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) |
||||
if (MINGW AND HDF5_MINGW_STATIC_GCC_LIBS) |
||||
target_link_options (${HDF5_CPP_LIBSH_TARGET} |
||||
PRIVATE -static-libgcc -static-libstdc++ |
||||
) |
||||
endif () |
||||
endif () |
||||
set_target_properties (cpp_ex_${example} PROPERTIES FOLDER examples/cpp) |
||||
|
||||
#----------------------------------------------------------------------------- |
||||
# Add Target to clang-format |
||||
#----------------------------------------------------------------------------- |
||||
if (HDF5_ENABLE_FORMATTERS) |
||||
clang_format (HDF5_CPP_EXAMPLES_${example}_FORMAT cpp_ex_${example}) |
||||
endif () |
||||
endforeach () |
||||
|
||||
if (BUILD_TESTING AND HDF5_TEST_CPP AND HDF5_TEST_EXAMPLES AND HDF5_TEST_SERIAL) |
||||
include (CMakeTests.cmake) |
||||
endif () |
||||
@ -0,0 +1,122 @@ |
||||
# |
||||
# Copyright by The HDF Group. |
||||
# All rights reserved. |
||||
# |
||||
# This file is part of HDF5. The full HDF5 copyright notice, including |
||||
# terms governing use, modification, and redistribution, is contained in |
||||
# the COPYING file, which can be found at the root of the source code |
||||
# distribution tree, or in https://www.hdfgroup.org/licenses. |
||||
# If you do not have access to either file, you may request a copy from |
||||
# help@hdfgroup.org. |
||||
# |
||||
|
||||
############################################################################## |
||||
############################################################################## |
||||
### T E S T I N G ### |
||||
############################################################################## |
||||
############################################################################## |
||||
# Remove any output file left over from previous test run |
||||
set (CPP_EX_CLEANFILES |
||||
Group.h5 |
||||
SDS.h5 |
||||
SDScompound.h5 |
||||
SDSextendible.h5 |
||||
Select.h5 |
||||
) |
||||
add_test ( |
||||
NAME CPP_ex-clear-objects |
||||
COMMAND ${CMAKE_COMMAND} |
||||
-E remove ${CPP_EX_CLEANFILES} |
||||
) |
||||
set_tests_properties (CPP_ex-clear-objects PROPERTIES |
||||
FIXTURES_SETUP clear_cppex |
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR} |
||||
) |
||||
add_test ( |
||||
NAME CPP_ex-clean-objects |
||||
COMMAND ${CMAKE_COMMAND} |
||||
-E remove ${CPP_EX_CLEANFILES} |
||||
) |
||||
set_tests_properties (CPP_ex-clean-objects PROPERTIES |
||||
FIXTURES_CLEANUP clear_cppex |
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR} |
||||
) |
||||
|
||||
foreach (example ${examples}) |
||||
if (HDF5_ENABLE_USING_MEMCHECKER) |
||||
add_test (NAME CPP_ex_${example} COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:cpp_ex_${example}>) |
||||
else () |
||||
add_test (NAME CPP_ex_${example} COMMAND "${CMAKE_COMMAND}" |
||||
-D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}" |
||||
-D "TEST_PROGRAM=$<TARGET_FILE:cpp_ex_${example}>" |
||||
-D "TEST_ARGS:STRING=" |
||||
-D "TEST_EXPECT=0" |
||||
-D "TEST_SKIP_COMPARE=TRUE" |
||||
-D "TEST_OUTPUT=cpp_ex_${example}.txt" |
||||
#-D "TEST_REFERENCE=cpp_ex_${example}.out" |
||||
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}" |
||||
-P "${HDF_RESOURCES_DIR}/runTest.cmake" |
||||
) |
||||
endif () |
||||
set_tests_properties (CPP_ex_${example} PROPERTIES FIXTURES_REQUIRED clear_cppex) |
||||
if (last_test) |
||||
set_tests_properties (CPP_ex_${example} PROPERTIES DEPENDS ${last_test}) |
||||
endif () |
||||
set (last_test "CPP_ex_${example}") |
||||
endforeach () |
||||
#the following dependencies are handled by the order of the files |
||||
# SET_TESTS_PROPERTIES(CPP_ex_readdata PROPERTIES DEPENDS CPP_ex_create) |
||||
# SET_TESTS_PROPERTIES(CPP_ex_chunks PROPERTIES DEPENDS CPP_ex_extend_ds) |
||||
set (CPP_EX_TUTR_CLEANFILES |
||||
h5tutr_cmprss.h5 |
||||
h5tutr_dset.h5 |
||||
h5tutr_extend.h5 |
||||
h5tutr_group.h5 |
||||
h5tutr_groups.h5 |
||||
h5tutr_subset.h5 |
||||
) |
||||
add_test ( |
||||
NAME CPP_ex_tutr-clear-objects |
||||
COMMAND ${CMAKE_COMMAND} |
||||
-E remove ${CPP_EX_TUTR_CLEANFILES} |
||||
) |
||||
set_tests_properties (CPP_ex_tutr-clear-objects PROPERTIES |
||||
FIXTURES_SETUP clear_cppex_tutr |
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR} |
||||
) |
||||
add_test ( |
||||
NAME CPP_ex_tutr-clean-objects |
||||
COMMAND ${CMAKE_COMMAND} |
||||
-E remove ${CPP_EX_TUTR_CLEANFILES} |
||||
) |
||||
set_tests_properties (CPP_ex_tutr-clean-objects PROPERTIES |
||||
FIXTURES_CLEANUP clear_cppex_tutr |
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR} |
||||
) |
||||
|
||||
foreach (example ${tutr_examples}) |
||||
if (HDF5_ENABLE_USING_MEMCHECKER) |
||||
add_test (NAME CPP_ex_${example} COMMAND ${CMAKE_CROSSCOMPILING_EMULATOR} $<TARGET_FILE:cpp_ex_${example}>) |
||||
else () |
||||
add_test (NAME CPP_ex_${example} COMMAND "${CMAKE_COMMAND}" |
||||
-D "TEST_EMULATOR=${CMAKE_CROSSCOMPILING_EMULATOR}" |
||||
-D "TEST_PROGRAM=$<TARGET_FILE:cpp_ex_${example}>" |
||||
-D "TEST_ARGS:STRING=" |
||||
-D "TEST_EXPECT=0" |
||||
-D "TEST_SKIP_COMPARE=TRUE" |
||||
-D "TEST_OUTPUT=cpp_ex_${example}.txt" |
||||
#-D "TEST_REFERENCE=cpp_ex_${example}.out" |
||||
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}" |
||||
-P "${HDF_RESOURCES_DIR}/runTest.cmake" |
||||
) |
||||
endif () |
||||
set_tests_properties (CPP_ex_${example} PROPERTIES FIXTURES_REQUIRED clear_cppex_tutr) |
||||
if (last_test) |
||||
set_tests_properties (CPP_ex_${example} PROPERTIES DEPENDS ${last_test}) |
||||
endif () |
||||
set (last_test "CPP_ex_${example}") |
||||
endforeach () |
||||
#the following dependencies are handled by the order of the files |
||||
# SET_TESTS_PROPERTIES(CPP_ex_h5tutr_crtatt PROPERTIES DEPENDS CPP_ex_h5tutr_crtdat) |
||||
# SET_TESTS_PROPERTIES(CPP_ex_h5tutr_rdwt PROPERTIES DEPENDS CPP_ex_h5tutr_crtdat) |
||||
# SET_TESTS_PROPERTIES(CPP_ex_h5tutr_crtgrpd PROPERTIES DEPENDS CPP_ex_h5tutr_crtgrpar) |
||||
File diff suppressed because it is too large
Load Diff
@ -0,0 +1,81 @@ |
||||
#
|
||||
# Copyright by The HDF Group.
|
||||
# All rights reserved.
|
||||
#
|
||||
# This file is part of HDF5. The full HDF5 copyright notice, including
|
||||
# terms governing use, modification, and redistribution, is contained in
|
||||
# the COPYING file, which can be found at the root of the source code
|
||||
# distribution tree, or in https://www.hdfgroup.org/licenses.
|
||||
# If you do not have access to either file, you may request a copy from
|
||||
# help@hdfgroup.org.
|
||||
##
|
||||
## Makefile.am
|
||||
## Run automake to generate a Makefile.in from this file.
|
||||
##
|
||||
#
|
||||
# HDF5 Library Examples Makefile(.in)
|
||||
#
|
||||
|
||||
include $(top_srcdir)/config/commence.am |
||||
|
||||
INSTALL_SCRIPT_FILES = run-c++-ex.sh
|
||||
|
||||
# These are the programs that 'make all' or 'make prog' will build and
|
||||
# which 'make check' will run. List them in the order they should be run.
|
||||
EXAMPLE_PROG=create readdata writedata compound extend_ds chunks h5group \
|
||||
h5tutr_cmprss h5tutr_crtatt h5tutr_crtdat h5tutr_crtgrpar \
|
||||
h5tutr_crtgrp h5tutr_crtgrpd h5tutr_extend h5tutr_rdwt \
|
||||
h5tutr_subset
|
||||
TEST_SCRIPT=testh5c++.sh
|
||||
TEST_EXAMPLES_SCRIPT=$(INSTALL_SCRIPT_FILES)
|
||||
|
||||
# These are the example files to be installed
|
||||
INSTALL_FILES=create.cpp readdata.cpp writedata.cpp compound.cpp \
|
||||
extend_ds.cpp chunks.cpp h5group.cpp \
|
||||
h5tutr_cmprss.cpp h5tutr_crtatt.cpp h5tutr_crtdat.cpp \
|
||||
h5tutr_crtgrpar.cpp h5tutr_crtgrp.cpp h5tutr_crtgrpd.cpp \
|
||||
h5tutr_extend.cpp h5tutr_rdwt.cpp h5tutr_subset.cpp
|
||||
|
||||
# Some of the examples depend on files created by running other examples
|
||||
readdata.chkexe_: create.chkexe_ |
||||
chunks.chkexe_: extend_ds.chkexe_ |
||||
h5tutr_rdwt.chkexe_: h5tutr_crtdat.chkexe |
||||
h5tutrcrtatt.chkexe_: h5tutr_crtdat.chkexe |
||||
h5tutr_crtgrpd.chkexe_: h5tutr_crtgrpar.chkexe |
||||
|
||||
# Tell conclude.am that these are C++ tests.
|
||||
CXX_API=yes
|
||||
|
||||
# Where to install examples
|
||||
# Note: no '/' after DESTDIR. Explanation in commence.am
|
||||
EXAMPLEDIR=${DESTDIR}$(examplesdir)/c++
|
||||
EXAMPLETOPDIR=${DESTDIR}$(examplesdir)
|
||||
|
||||
# How to build programs using h5c++
|
||||
$(EXTRA_PROG): $(H5CPP) |
||||
$(H5CPP) $(H5CCFLAGS) $(CPPFLAGS) -o $@ $(srcdir)/$@.cpp
|
||||
|
||||
# List dependencies for each program. Normally, automake would take
|
||||
# care of this for us, but if we tell automake about the programs it
|
||||
# will try to build them with the normal C++ compiler, not h5c++. This is
|
||||
# an inelegant way of solving the problem, unfortunately.
|
||||
create: $(srcdir)/create.cpp |
||||
readdata: $(srcdir)/readdata.cpp |
||||
writedata: $(srcdir)/writedata.cpp |
||||
compound: $(srcdir)/compound.cpp |
||||
extend_ds: $(srcdir)/extend_ds.cpp |
||||
chunks: $(srcdir)/chunks.cpp |
||||
h5group: $(srcdir)/h5group.cpp |
||||
|
||||
h5tutr_cmprss: $(srcdir)/h5tutr_cmprss.cpp |
||||
h5tutr_crtatt: $(srcdir)/h5tutr_crtatt.cpp |
||||
h5tutr_crtdat: $(srcdir)/h5tutr_crtdat.cpp |
||||
h5tutr_crtgrpar: $(srcdir)/h5tutr_crtgrpar.cpp |
||||
h5tutr_crtgrp: $(srcdir)/h5tutr_crtgrp.cpp |
||||
h5tutr_crtgrpd: $(srcdir)/h5tutr_crtgrpd.cpp |
||||
h5tutr_extend: $(srcdir)/h5tutr_extend.cpp |
||||
h5tutr_rdwt: $(srcdir)/h5tutr_rdwt.cpp |
||||
h5tutr_subset: $(srcdir)/h5tutr_subset.cpp |
||||
|
||||
include $(top_srcdir)/config/examples.am |
||||
include $(top_srcdir)/config/conclude.am |
||||
File diff suppressed because it is too large
Load Diff
Some files were not shown because too many files have changed in this diff Show More
Loading…
Reference in new issue