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899 lines
33 KiB
899 lines
33 KiB
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the COPYING file, which can be found at the root of the source code *
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* distribution tree, or in https://www.hdfgroup.org/licenses. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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package test;
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import static org.junit.Assert.assertFalse;
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import static org.junit.Assert.assertTrue;
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import static org.junit.Assert.fail;
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import java.util.ArrayList;
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import hdf.hdf5lib.H5;
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import hdf.hdf5lib.HDF5Constants;
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import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t;
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import hdf.hdf5lib.callbacks.H5O_iterate_t;
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import hdf.hdf5lib.exceptions.HDF5LibraryException;
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import hdf.hdf5lib.structs.H5O_hdr_info_t;
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import hdf.hdf5lib.structs.H5O_info_t;
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import hdf.hdf5lib.structs.H5O_native_info_t;
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import hdf.hdf5lib.structs.H5O_token_t;
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import hdf.hdf5lib.structs.H5_ih_info_t;
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import org.junit.After;
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import org.junit.Before;
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import org.junit.Rule;
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import org.junit.Test;
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import org.junit.rules.TestName;
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public class TestH5Obasic {
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@Rule
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public TestName testname = new TestName();
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private static final String H5_FILE = "h5ex_g_iterateO1.hdf";
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private static H5O_token_t H5la_ds1 = null;
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private static H5O_token_t H5la_l1 = null;
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long H5fid = HDF5Constants.H5I_INVALID_HID;
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@Before
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public void openH5file() throws HDF5LibraryException, NullPointerException
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{
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assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
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System.out.print(testname.getMethodName());
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try {
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H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Fopen: openH5file: " + err);
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}
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}
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@After
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public void closeH5file() throws HDF5LibraryException
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{
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if (H5fid > 0) {
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try {
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H5.H5Fclose(H5fid);
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}
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catch (Exception ex) {
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}
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}
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System.out.println();
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Oopen_not_exists() throws Throwable
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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oid = H5.H5Oopen(H5fid, "Never_created", HDF5Constants.H5P_DEFAULT);
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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@Test
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public void testH5Oget_info_dataset()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_info_t obj_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
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obj_info = H5.H5Oget_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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@Test
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public void testH5Oget_info_hardlink()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_info_t obj_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
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obj_info = H5.H5Oget_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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@Test
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public void testH5Oget_info_group()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_info_t obj_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
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obj_info = H5.H5Oget_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_GROUP);
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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@Test
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public void testH5Oget_info_datatype()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_info_t obj_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
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obj_info = H5.H5Oget_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Oget_info_by_name_not_exist_name() throws Throwable
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{
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H5.H5Oget_info_by_name(H5fid, "None", HDF5Constants.H5P_DEFAULT);
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Oget_info_by_name_not_exists() throws Throwable
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{
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H5.H5Oget_info_by_name(H5fid, "Bogus", HDF5Constants.H5P_DEFAULT);
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}
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@Test
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public void testH5Oget_info_by_name_dataset()
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{
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H5O_info_t obj_info = null;
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try {
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obj_info = H5.H5Oget_info_by_name(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
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}
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@Test
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public void testH5Oget_info_by_name_hardlink()
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{
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H5O_info_t obj_info = null;
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try {
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obj_info = H5.H5Oget_info_by_name(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
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}
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@Test
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public void testH5Oget_info_by_name_group()
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{
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H5O_info_t obj_info = null;
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try {
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obj_info = H5.H5Oget_info_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_GROUP);
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}
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@Test
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public void testH5Oget_info_by_name_datatype()
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{
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H5O_info_t obj_info = null;
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try {
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obj_info = H5.H5Oget_info_by_name(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_info: " + err);
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}
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assertFalse("H5Oget_info ", obj_info == null);
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assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_NAMED_DATATYPE);
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Oget_info_by_idx_name_not_exist_name() throws Throwable
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{
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H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
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HDF5Constants.H5P_DEFAULT);
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Oget_info_by_idx_name_not_exist_create() throws Throwable
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{
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H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0,
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HDF5Constants.H5P_DEFAULT);
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Oget_info_by_idx_not_exist_name() throws Throwable
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{
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H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5,
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HDF5Constants.H5P_DEFAULT);
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Oget_info_by_idx_not_exist_create() throws Throwable
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{
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H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5,
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HDF5Constants.H5P_DEFAULT);
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}
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@Test
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public void testH5Oget_info_by_idx_n0()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_info_t obj_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
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obj_info = H5.H5Oget_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("testH5Oget_info_by_idx_n0:H5.H5Oget_info: " + err);
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}
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H5la_ds1 = obj_info.token;
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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try {
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obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
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HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("testH5Oget_info_by_idx_n0:H5.H5Oget_info_by_idx: " + err);
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}
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assertFalse("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx ", obj_info == null);
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assertTrue("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx link type",
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obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
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assertTrue("testH5Oget_info_by_idx_n0:Link Object token", obj_info.token.equals(H5la_ds1));
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}
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@Test
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public void testH5Oget_info_by_idx_n3()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_info_t obj_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
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obj_info = H5.H5Oget_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("testH5Oget_info_by_idx_n3:H5.H5Oget_info: " + err);
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}
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H5la_l1 = obj_info.token;
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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try {
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obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
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HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("testH5Oget_info_by_idx_n3:H5.H5Oget_info_by_idx: " + err);
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}
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assertFalse("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx ", obj_info == null);
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assertTrue("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx link type",
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obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
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assertTrue("testH5Oget_info_by_idx_n3:Link Object Token", obj_info.token.equals(H5la_l1));
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}
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@Test
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public void testH5Oget_native_info_dataset()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_native_info_t native_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
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native_info = H5.H5Oget_native_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_native_info: " + err);
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}
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assertFalse("H5Oget_native_info ", native_info == null);
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assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
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assertFalse("H5Oget_native_info ", native_info.obj_info == null);
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assertFalse("H5Oget_native_info ", native_info.attr_info == null);
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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@Test
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public void testH5Oget_native_info_hardlink()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_native_info_t native_info = null;
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try {
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oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
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native_info = H5.H5Oget_native_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_native_info: " + err);
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}
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assertFalse("H5Oget_native_info ", native_info == null);
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assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
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assertFalse("H5Oget_native_info ", native_info.obj_info == null);
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assertFalse("H5Oget_native_info ", native_info.attr_info == null);
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try {
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H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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@Test
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public void testH5Oget_native_info_group()
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{
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long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_native_info_t native_info = null;
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|
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try {
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oid = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
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native_info = H5.H5Oget_native_info(oid);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Oget_native_info: " + err);
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}
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assertFalse("H5Oget_native_info ", native_info == null);
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assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
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|
assertFalse("H5Oget_native_info ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info ", native_info.attr_info == null);
|
|
try {
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|
H5.H5Oclose(oid);
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}
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catch (Exception ex) {
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}
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}
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|
@Test
|
|
public void testH5Oget_native_info_datatype()
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|
{
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|
long oid = HDF5Constants.H5I_INVALID_HID;
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H5O_native_info_t native_info = null;
|
|
|
|
try {
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oid = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
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native_info = H5.H5Oget_native_info(oid);
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|
}
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|
catch (Throwable err) {
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|
err.printStackTrace();
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|
fail("H5.H5Oget_native_info: " + err);
|
|
}
|
|
assertFalse("H5Oget_native_info ", native_info == null);
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|
assertFalse("H5Oget_native_info ", native_info.hdr_info == null);
|
|
assertFalse("H5Oget_native_info ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info ", native_info.attr_info == null);
|
|
try {
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|
H5.H5Oclose(oid);
|
|
}
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|
catch (Exception ex) {
|
|
}
|
|
}
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|
|
@Test(expected = HDF5LibraryException.class)
|
|
public void testH5Oget_native_info_by_name_not_exist_name() throws Throwable
|
|
{
|
|
H5.H5Oget_native_info_by_name(H5fid, "None", HDF5Constants.H5P_DEFAULT);
|
|
}
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|
|
@Test(expected = HDF5LibraryException.class)
|
|
public void testH5Oget_native_info_by_name_not_exists() throws Throwable
|
|
{
|
|
H5.H5Oget_native_info_by_name(H5fid, "Bogus", HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oget_native_info_by_name_dataset()
|
|
{
|
|
H5O_native_info_t native_info = null;
|
|
|
|
try {
|
|
native_info = H5.H5Oget_native_info_by_name(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("H5.H5Oget_native_info_by_name: " + err);
|
|
}
|
|
assertFalse("H5Oget_native_info_by_name ", native_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null);
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oget_native_info_by_name_hardlink()
|
|
{
|
|
H5O_native_info_t native_info = null;
|
|
|
|
try {
|
|
native_info = H5.H5Oget_native_info_by_name(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("H5.H5Oget_native_info_by_name: " + err);
|
|
}
|
|
assertFalse("H5Oget_native_info_by_name ", native_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null);
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oget_native_info_by_name_group()
|
|
{
|
|
H5O_native_info_t native_info = null;
|
|
|
|
try {
|
|
native_info = H5.H5Oget_native_info_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("H5.H5Oget_native_info_by_name: " + err);
|
|
}
|
|
assertFalse("H5Oget_native_info_by_name ", native_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null);
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oget_native_info_by_name_datatype()
|
|
{
|
|
H5O_native_info_t native_info = null;
|
|
|
|
try {
|
|
native_info = H5.H5Oget_native_info_by_name(H5fid, "DT1", HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("H5.H5Oget_native_info_by_name: " + err);
|
|
}
|
|
assertFalse("H5Oget_native_info_by_name ", native_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null);
|
|
}
|
|
|
|
@Test(expected = HDF5LibraryException.class)
|
|
public void testH5Oget_native_info_by_idx_name_not_exist_name() throws Throwable
|
|
{
|
|
H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
|
|
HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
|
|
@Test(expected = HDF5LibraryException.class)
|
|
public void testH5Oget_native_info_by_idx_name_not_exist_create() throws Throwable
|
|
{
|
|
H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER,
|
|
HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
|
|
@Test(expected = HDF5LibraryException.class)
|
|
public void testH5Oget_native_info_by_idx_not_exist_name() throws Throwable
|
|
{
|
|
H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5,
|
|
HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
|
|
@Test(expected = HDF5LibraryException.class)
|
|
public void testH5Oget_native_info_by_idx_not_exist_create() throws Throwable
|
|
{
|
|
H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC,
|
|
5, HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oget_native_info_by_idx_n0()
|
|
{
|
|
long oid = HDF5Constants.H5I_INVALID_HID;
|
|
H5O_native_info_t native_info = null;
|
|
H5O_hdr_info_t ohdr;
|
|
H5_ih_info_t oinfo;
|
|
H5_ih_info_t ainfo;
|
|
|
|
try {
|
|
oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
|
|
native_info = H5.H5Oget_native_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oget_native_info_by_idx_n0:H5.H5Oget_native_info: " + err);
|
|
}
|
|
|
|
ohdr = native_info.hdr_info;
|
|
oinfo = native_info.obj_info;
|
|
ainfo = native_info.attr_info;
|
|
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
|
|
try {
|
|
native_info =
|
|
H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
|
|
HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oget_native_info_by_idx_n0:H5.H5Oget_native_info_by_idx: " + err);
|
|
}
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info == null);
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info.hdr_info == null);
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info.attr_info == null);
|
|
assertTrue("testH5Oget_native_info_by_idx_n0:Object Header Info", native_info.hdr_info.equals(ohdr));
|
|
assertTrue("testH5Oget_native_info_by_idx_n0:Object Info", native_info.obj_info.equals(oinfo));
|
|
assertTrue("testH5Oget_native_info_by_idx_n0:Attribute Info", native_info.attr_info.equals(ainfo));
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oget_native_info_by_idx_n3()
|
|
{
|
|
long oid = HDF5Constants.H5I_INVALID_HID;
|
|
H5O_native_info_t native_info = null;
|
|
H5O_hdr_info_t ohdr;
|
|
H5_ih_info_t oinfo;
|
|
H5_ih_info_t ainfo;
|
|
|
|
try {
|
|
oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
|
|
native_info = H5.H5Oget_native_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oget_native_info_by_idx_n3:H5.H5Oget_native_info: " + err);
|
|
}
|
|
|
|
ohdr = native_info.hdr_info;
|
|
oinfo = native_info.obj_info;
|
|
ainfo = native_info.attr_info;
|
|
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
|
|
try {
|
|
native_info =
|
|
H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME,
|
|
HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oget_native_info_by_idx_n3:H5.H5Oget_native_info_by_idx: " + err);
|
|
}
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info == null);
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info.hdr_info == null);
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info.obj_info == null);
|
|
assertFalse("H5Oget_native_info_by_idx ", native_info.attr_info == null);
|
|
assertTrue("testH5Oget_native_info_by_idx_n3:Object Header Info", native_info.hdr_info.equals(ohdr));
|
|
assertTrue("testH5Oget_native_info_by_idx_n3:Object Info", native_info.obj_info.equals(oinfo));
|
|
assertTrue("testH5Oget_native_info_by_idx_n3:Attribute Info", native_info.attr_info.equals(ainfo));
|
|
}
|
|
|
|
@Test
|
|
public void testH5Ovisit()
|
|
{
|
|
class idata {
|
|
public String link_name = null;
|
|
public int link_type = -1;
|
|
idata(String name, int type)
|
|
{
|
|
this.link_name = name;
|
|
this.link_type = type;
|
|
}
|
|
}
|
|
class H5O_iter_data implements H5O_iterate_opdata_t {
|
|
public ArrayList<idata> iterdata = new ArrayList<idata>();
|
|
}
|
|
H5O_iterate_opdata_t iter_data = new H5O_iter_data();
|
|
class H5O_iter_callback implements H5O_iterate_t {
|
|
public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data)
|
|
{
|
|
idata id = new idata(name, info.type);
|
|
((H5O_iter_data)op_data).iterdata.add(id);
|
|
return 0;
|
|
}
|
|
}
|
|
H5O_iterate_t iter_cb = new H5O_iter_callback();
|
|
try {
|
|
H5.H5Ovisit(H5fid, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb, iter_data);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("H5.H5Ovisit: " + err);
|
|
}
|
|
assertFalse("H5Ovisit ", ((H5O_iter_data)iter_data).iterdata.isEmpty());
|
|
assertTrue("H5Ovisit " + ((H5O_iter_data)iter_data).iterdata.size(),
|
|
((H5O_iter_data)iter_data).iterdata.size() == 5);
|
|
assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(0)).link_name,
|
|
(((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".") == 0);
|
|
assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(1)).link_name,
|
|
(((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS1") == 0);
|
|
assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(2)).link_name,
|
|
(((H5O_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("DT1") == 0);
|
|
assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(3)).link_name,
|
|
(((H5O_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1") == 0);
|
|
assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(4)).link_name,
|
|
(((H5O_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("G1/DS2") == 0);
|
|
// assertTrue("H5Ovisit
|
|
// "+((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name,((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name.compareToIgnoreCase("L1")==0);
|
|
}
|
|
|
|
@Test
|
|
public void testH5Ovisit_by_name()
|
|
{
|
|
class idata {
|
|
public String link_name = null;
|
|
public int link_type = -1;
|
|
idata(String name, int type)
|
|
{
|
|
this.link_name = name;
|
|
this.link_type = type;
|
|
}
|
|
}
|
|
class H5O_iter_data implements H5O_iterate_opdata_t {
|
|
public ArrayList<idata> iterdata = new ArrayList<idata>();
|
|
}
|
|
H5O_iterate_opdata_t iter_data = new H5O_iter_data();
|
|
class H5O_iter_callback implements H5O_iterate_t {
|
|
public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data)
|
|
{
|
|
idata id = new idata(name, info.type);
|
|
((H5O_iter_data)op_data).iterdata.add(id);
|
|
return 0;
|
|
}
|
|
}
|
|
H5O_iterate_t iter_cb = new H5O_iter_callback();
|
|
try {
|
|
H5.H5Ovisit_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb,
|
|
iter_data, HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("H5.H5Ovisit_by_name: " + err);
|
|
}
|
|
assertFalse("H5Ovisit_by_name ", ((H5O_iter_data)iter_data).iterdata.isEmpty());
|
|
assertTrue("H5Ovisit_by_name " + ((H5O_iter_data)iter_data).iterdata.size(),
|
|
((H5O_iter_data)iter_data).iterdata.size() == 2);
|
|
assertTrue("H5Ovisit_by_name " + (((H5O_iter_data)iter_data).iterdata.get(0)).link_name,
|
|
(((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".") == 0);
|
|
assertTrue("H5Ovisit_by_name " + (((H5O_iter_data)iter_data).iterdata.get(1)).link_name,
|
|
(((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS2") == 0);
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oexists_by_name()
|
|
{
|
|
boolean name_exists = false;
|
|
try {
|
|
name_exists = H5.H5Oexists_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("H5.H5Oexists_by_name: " + err);
|
|
}
|
|
assertTrue("H5Oexists_by_name ", name_exists);
|
|
// TODO get dangling link result
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oopen_by_token()
|
|
{
|
|
long oid = HDF5Constants.H5I_INVALID_HID;
|
|
H5O_info_t obj_info = null;
|
|
try {
|
|
try {
|
|
oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
|
|
obj_info = H5.H5Oget_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_token: H5.H5Oget_info: " + err);
|
|
}
|
|
H5la_ds1 = obj_info.token;
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
try {
|
|
oid = H5.H5Oopen_by_token(H5fid, H5la_ds1);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_token: H5.H5Oopen_by_token: " + err);
|
|
}
|
|
try {
|
|
obj_info = H5.H5Oget_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_token: H5.H5Oget_info: " + err);
|
|
}
|
|
assertFalse("testH5Oopen_by_token: H5Oget_info ", obj_info == null);
|
|
assertTrue("testH5Oopen_by_token: H5Oget_info link type",
|
|
obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
|
|
assertTrue("testH5Oopen_by_token: Link Object Token", obj_info.token.equals(H5la_ds1));
|
|
}
|
|
finally {
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
}
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oopen_by_idx_n0()
|
|
{
|
|
long oid = HDF5Constants.H5I_INVALID_HID;
|
|
H5O_info_t obj_info = null;
|
|
try {
|
|
try {
|
|
oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT);
|
|
obj_info = H5.H5Oget_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_idx_n0: H5.H5Oget_info: " + err);
|
|
}
|
|
H5la_ds1 = obj_info.token;
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
try {
|
|
oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0,
|
|
HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_idx_n0: H5.H5Oopen_by_idx: " + err);
|
|
}
|
|
try {
|
|
obj_info = H5.H5Oget_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_idx_n0: H5.H5Oget_info_by_idx: " + err);
|
|
}
|
|
assertFalse("testH5Oopen_by_idx_n0: H5Oget_info_by_idx ", obj_info == null);
|
|
assertTrue("testH5Oopen_by_idx_n0: H5Oget_info_by_idx link type",
|
|
obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
|
|
assertTrue("testH5Oopen_by_idx_n0: Link Object Token", obj_info.token.equals(H5la_ds1));
|
|
}
|
|
finally {
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
}
|
|
}
|
|
|
|
@Test
|
|
public void testH5Oopen_by_idx_n3()
|
|
{
|
|
long oid = HDF5Constants.H5I_INVALID_HID;
|
|
H5O_info_t obj_info = null;
|
|
try {
|
|
try {
|
|
oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT);
|
|
obj_info = H5.H5Oget_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_idx_n3:H5.H5Oget_info: " + err);
|
|
}
|
|
H5la_l1 = obj_info.token;
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
try {
|
|
oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3,
|
|
HDF5Constants.H5P_DEFAULT);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_idx_n3: H5.H5Oopen_by_idx: " + err);
|
|
}
|
|
try {
|
|
obj_info = H5.H5Oget_info(oid);
|
|
}
|
|
catch (Throwable err) {
|
|
err.printStackTrace();
|
|
fail("testH5Oopen_by_idx_n3:H5.H5Oget_info_by_idx: " + err);
|
|
}
|
|
assertFalse("testH5Oopen_by_idx_n3:H5Oget_info_by_idx ", obj_info == null);
|
|
assertTrue("testH5Oopen_by_idx_n3:H5Oget_info_by_idx link type",
|
|
obj_info.type == HDF5Constants.H5O_TYPE_DATASET);
|
|
assertTrue("testH5Oopen_by_idx_n3:Link Object Token", obj_info.token.equals(H5la_l1));
|
|
}
|
|
finally {
|
|
try {
|
|
H5.H5Oclose(oid);
|
|
}
|
|
catch (Exception ex) {
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|